Carg11482 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11482
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Rhodanese-like domain-containing protein 4A
Location	Carg_Chr17: 9233139 .. 9237041 (+)
RNA-Seq Expression	Carg11482
Synteny	Carg11482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCGCACTCCCTCTACCTCTCCTCTTCCTCCCTATTTCTCCACAAACTTCCCTCTCACAAACCAATCTCTCTATCCCCGTCGCTCATTCCCTTCAATTCAAAACCTCTCAGCGTCTTCAATGGCGCCCATCTTCCCACCATTAACAAAACCCCATTTCAAAACCCAACCAATCCTTCAAAGCCTCTAAGAAACCCCCATTTTCTCTTCGCAAAAACCTCCCCATTTCACCAATTGGTGAAATCCCATCTCCCTTTTGCTCTTACTCAGCTCCTTCTCTCCCCTCTCCCTAGCCTCGCCTTGGAAACCGACCAAGCTTCTTCCGATAAGATAAACTTGGAGTCCATTTTAGTTTCGATTGATGACTTTTTCAACCGATACCCATTTTTTGTTGCTGGGTGTACCTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTATTTTCTAAGGAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAGAATTCGGGATGACCCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTAGGGTCTCCCAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTATTCAGAGGAGGATGAAGATGGGTTTGTGAAGAAGGTGAAGAAGGGCTTTGGAGATGGTGCTGATACTCTTGTATTTGTCCTGGACAAGTAAGTTGTTTCCATTTACTTCAAATGAAAATGGATTTGTGTGATCTTCATACTTTTATTTTAGTTTTTTGCACGCTGGAGGCAGTGGGGAAGATGGAGAGGGATGAGCGAGGGAGGCCAAGAGAGGAAACATGGGAGAGAGGAAGATTGAGAGAGGGAAAATGTAACAGCCCAAACCCACCGCTAGCAGATATTGTTCGCTTTGACCCATTACTCATTTGCCTCACAGTTTTAAAACATGTATGCTTGGGAGAGGTTTCCACACCTTTATAAACAATGCTTCGTTTTCCTCTCCAACTGATGTGAGATCTCACAATGTGGAAACTTCTCCCTAGTAGATGCATTTTAAAATCGTGAGGGTGATGATAATACGTAACGGGCCAAAGCAGACAATATCTGCTAGAGGTAGATAGCAGATTTAGGCTGTTTCAGAATGAATGAGAGGAATATGGTGTACTCCATAAATGTGCAAACTTCAATAGCGAACACTGTTGTAGTTATCATGGCCTGAGTCATGTCTTATGGTTTTCCTATTTAGCTAATGTGGCCTAAAACCAAACGGAAGGCCCCGAATTTTGCTGTTTCAAACTTTGCTGTCTTGCCAATTATATGAGTTCAATTCATAACGTGCTACGCTTTTAATGTCTAAGGTAGTTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGTTCAAGAATGGCTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGATGGTATGTGTCCTCCTTTTGCTAATCTACTTGATGAATATGTTTTAGTTGAAGGCTTAATCAGATACGTTGTAATGTTTATTTTGATTTGTTTTCTTGCCTCCTTTTTGGGGGCTCTTTCTTCTGGTGGCCCCTTAGTTTTGGTATTCTTTCATTTTTTTTCTCAATGAAGTTGGGTTATTCATTGAAAAAAAAAAGAGTAACGAAAAGTGGGGAAAAATAGCTAAACATCGAAAGCCAAGGTCATCCTCGGTCCTCGTCCTCTTCTAAATCAATGTACCATCTAAAGATTCTCCTTCGACATTCGACTCATGATTTCCAATATTCCAATGTTTGATCTCTTCCATCTCTGCCTTGCTCGTGTCCATTTCCTATTAACCACAATCATCATCGTGTTACTTTTCTCTTATAGGTGGTGAAGTCGAGTGGTTTTCCTAACTCGAAAACTTAGAGGCAACAGTGGTTGACGTTCCTCTAGACACGGTTGGTAGAGCTTGCTTTATGCTTCTCTAGTACCACTAGCATAGGCTACATCCTACAATCACCTATTGTCAAAATCCAACTCATCTTCTCTTGGTCATTTTCTTCCTCCATCATTCAAACCAACCATTATTTATGCTTAGAATATGATCCAAAGGTATTGGGTCAAGTCGATTTCTTTATATCAAGGTGTTGTATAAGGAGATACAAGACTCTGCCCATCTATCCACTCTTGGTTGATTGTGCAAGTATATTGAATCTTGTTAAATGACTAATCAACCTAAAAGCTTGAGTTGATGGATTAAGGTAAATTTGATTATATCATTTGTGGATGCACTATTAATTGGAACGGAAATGACTTTGAAGGGTTTAGAATACAAGACCTCTTGCTTTGATCCAATGTTAATTCAGGTTGGCAAGATAGGCAATGGTTCGTTAACCGTCACACCCTTTTATCTTGGCTTCTCAATTCCTAATTGATTTCCATTTTTGTTTGGCCTACGAGAGTTCCAACCTGTTTCCCCACAAGCCATACGATCACTTATTCTTGTTCTGTGACCTGTAGATCTAAATTATTCAAGAACCCCTAAGACGATAAGAATTCATCCCAAGGAACTTTTCAAATCGACCAAAGTTTTTTCCATTTTGAAAGTGTATAAAACTTAATCAACCAACGTTAACTATTTGATTCGAGTTAGTACAGCAGTTTTTTTCAGAGTTTTCATTCTCACTCTTAATTTCTCTGTTCAGATTCCATACCTACTACCTGTGTTGACAGTAGGGTGAAAAGGTTCTTTAGTTTCTTTTCTTTCCAAATCATGACTTGGTGGAAGTTAGAAAGTAGAGGTTAGACTCTATTCTAATTTAGGTAAAGCTTTCTGTTACTTATTTTCATCCTCCTCTTTGCAGGCAATACAGGAGTCCTTGTTACCGCCTTCTGTTCACATTAGCAGAAGAAAAAAGGCTAAAGCTTCCAAAAAGTTTGGGACTAATGGAGTTGTTCAACAAAGTGGAGACAAAGAGGCTGTTCCATCTTTGAAATCCTCCAATGGAGAAATCCAAACTTCACCCCTCCATGTCAATGCATCGTCAGACACCGAGTCCAAGTTGAAAACTCGGTCAAGGTCATCGTCTCCTTATCCAAACGTAAGTTCACTCTGTCAACTAGTACATCTTTAAGTATGAACTGATTTTTCACTCTTTATAAGTAGAGAAAAAGAAGGTCTAAGCTCAATTAAAATACAAAAGCACATTGTAATTTTTGTATGTTAGATTATCTAGTCCAATATGCTTCTAAGCAATATAAAAACAATCAAAAGCCTTTGAAATGCCTCAAAGGAAACCATTTAATTAGTGGTTTTCCTTAAACTGCTTGTATCAAGTGTTTCATCTAAAAACACTAGCTTCAAAAATGTCTGAAAGTCACTCAATTAATAGAAAATGCATGTTTCGTTATATATTGGAGACTCTCTTTTATGTAGAATGTTCTTCCTGTCATGATCTAGTGTTTGTATTTACTTTGATTGTGGATTTACTGTGCATGTGATTTACAGACTGACTCCATTTTCTATAACACATATATGACAGTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAAGGACATGAAAGACTTACAAGTTTTGAGCTGATCATCTTGTTCTGCATAGAGAAGTCGACTACAATACTATCAAGCGGCTGCTGCTATTGTTTCCATGTGGTTGTTGTAGACTCCAATTTTTTGGCAACTAGCTGTATATAATACATAATTTAGTCTTTTTGCTCCTTATACAGTTGGTGCAATTCAAGATTTAAGCAAATGAAGGCACTTCGACATTCCTCAATGAATAATTACATGAAAATGGGGTGATATTTATACATGAAGCACAAGGCCTAGCGACTTAAGAATAAACGAAAATAATACTTGATCATTTGCAAGTATAGCATGAGGAGCTTCTGGAT

mRNA sequence

ATGGAGTCGCACTCCCTCTACCTCTCCTCTTCCTCCCTATTTCTCCACAAACTTCCCTCTCACAAACCAATCTCTCTATCCCCGTCGCTCATTCCCTTCAATTCAAAACCTCTCAGCGTCTTCAATGGCGCCCATCTTCCCACCATTAACAAAACCCCATTTCAAAACCCAACCAATCCTTCAAAGCCTCTAAGAAACCCCCATTTTCTCTTCGCAAAAACCTCCCCATTTCACCAATTGGTGAAATCCCATCTCCCTTTTGCTCTTACTCAGCTCCTTCTCTCCCCTCTCCCTAGCCTCGCCTTGGAAACCGACCAAGCTTCTTCCGATAAGATAAACTTGGAGTCCATTTTAGTTTCGATTGATGACTTTTTCAACCGATACCCATTTTTTGTTGCTGGGTGTACCTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTATTTTCTAAGGAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAGAATTCGGGATGACCCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTAGGGTCTCCCAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTATTCAGAGGAGGATGAAGATGGGTTTGTGAAGAAGGTGAAGAAGGGCTTTGGAGATGGTGCTGATACTCTTGTATTTGTCCTGGACAATTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGTTCAAGAATGGCTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGATGGCAATACAGGAGTCCTTGTTACCGCCTTCTGTTCACATTAGCAGAAGAAAAAAGGCTAAAGCTTCCAAAAAGTTTGGGACTAATGGAGTTGTTCAACAAAGTGGAGACAAAGAGGCTGTTCCATCTTTGAAATCCTCCAATGGAGAAATCCAAACTTCACCCCTCCATGTCAATGCATCGTCAGACACCGAGTCCAAGTTGAAAACTCGGTCAAGGTCATCGTCTCCTTATCCAAACTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAAGGACATGAAAGACTTACAAGTTTTGAGCTGATCATCTTGTTCTGCATAGAGAAGTCGACTACAATACTATCAAGCGGCTGCTGCTATTGTTTCCATGTGGTTGTTGTAGACTCCAATTTTTTGGCAACTAGCTGTATATAATACATAATTTAGTCTTTTTGCTCCTTATACAGTTGGTGCAATTCAAGATTTAAGCAAATGAAGGCACTTCGACATTCCTCAATGAATAATTACATGAAAATGGGGTGATATTTATACATGAAGCACAAGGCCTAGCGACTTAAGAATAAACGAAAATAATACTTGATCATTTGCAAGTATAGCATGAGGAGCTTCTGGAT

Coding sequence (CDS)

ATGGAGTCGCACTCCCTCTACCTCTCCTCTTCCTCCCTATTTCTCCACAAACTTCCCTCTCACAAACCAATCTCTCTATCCCCGTCGCTCATTCCCTTCAATTCAAAACCTCTCAGCGTCTTCAATGGCGCCCATCTTCCCACCATTAACAAAACCCCATTTCAAAACCCAACCAATCCTTCAAAGCCTCTAAGAAACCCCCATTTTCTCTTCGCAAAAACCTCCCCATTTCACCAATTGGTGAAATCCCATCTCCCTTTTGCTCTTACTCAGCTCCTTCTCTCCCCTCTCCCTAGCCTCGCCTTGGAAACCGACCAAGCTTCTTCCGATAAGATAAACTTGGAGTCCATTTTAGTTTCGATTGATGACTTTTTCAACCGATACCCATTTTTTGTTGCTGGGTGTACCTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTATTTTCTAAGGAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAGAATTCGGGATGACCCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTAGGGTCTCCCAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTATTCAGAGGAGGATGAAGATGGGTTTGTGAAGAAGGTGAAGAAGGGCTTTGGAGATGGTGCTGATACTCTTGTATTTGTCCTGGACAATTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGTTCAAGAATGGCTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGATGGCAATACAGGAGTCCTTGTTACCGCCTTCTGTTCACATTAGCAGAAGAAAAAAGGCTAAAGCTTCCAAAAAGTTTGGGACTAATGGAGTTGTTCAACAAAGTGGAGACAAAGAGGCTGTTCCATCTTTGAAATCCTCCAATGGAGAAATCCAAACTTCACCCCTCCATGTCAATGCATCGTCAGACACCGAGTCCAAGTTGAAAACTCGGTCAAGGTCATCGTCTCCTTATCCAAACTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAAGGACATGA

Protein sequence

MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKPRT

Homology

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BLAST of Carg11482 vs. NCBI nr
Match: KAG7014541.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 704.9 bits (1818), Expect = 3.6e-199
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60

Query: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120
           SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS
Sbjct: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120

Query: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180
           IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE
Sbjct: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180

Query: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240
           KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV
Sbjct: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240

Query: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300
           AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS
Sbjct: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300

Query: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360
           GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP
Sbjct: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Carg11482 vs. NCBI nr
Match: KAG6576020.1 (Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699.1 bits (1803), Expect = 2.0e-197
Identity = 361/365 (98.90%), Postives = 362/365 (99.18%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60

Query: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120
           SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS
Sbjct: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120

Query: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180
           IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE
Sbjct: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180

Query: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGF---VKKVKKGFGDGADTLVFVLDNFDGNS 240
           KSLAFLGSPNLRILNKDVVQVVYSEEDEDGF   VKKVKKGFGDGADTLVFVLDNFDGNS
Sbjct: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKVKKGFGDGADTLVFVLDNFDGNS 240

Query: 241 MKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVV 300
           MKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVV
Sbjct: 241 MKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVV 300

Query: 301 QQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTP 360
           QQSGDKEAVPSLKSSNGE+QTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTP
Sbjct: 301 QQSGDKEAVPSLKSSNGEVQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTP 360

Query: 361 SKPRT 363
           SKPRT
Sbjct: 361 SKPRT 365

[Close]

BLAST of Carg11482 vs. NCBI nr
Match: XP_022954032.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita moschata])

HSP 1 Score: 698.0 bits (1800), Expect = 4.4e-197
Identity = 359/362 (99.17%), Postives = 360/362 (99.45%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60

Query: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120
           SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS
Sbjct: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120

Query: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180
           IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE
Sbjct: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180

Query: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240
           KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV
Sbjct: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240

Query: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300
           AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQ+S
Sbjct: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQKS 300

Query: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360
            DKEAVPSL SSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP
Sbjct: 301 VDKEAVPSLNSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Carg11482 vs. NCBI nr
Match: XP_022991517.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita maxima])

HSP 1 Score: 689.5 bits (1778), Expect = 1.6e-194
Identity = 354/362 (97.79%), Postives = 357/362 (98.62%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNG H P+INKTPFQNPTNP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGTHFPSINKTPFQNPTNP 60

Query: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120
           S PLRNPHFLFAKTSPF QLVKSHLPFALTQLLL+PLPSLALETDQASSDKINLESILVS
Sbjct: 61  SNPLRNPHFLFAKTSPFLQLVKSHLPFALTQLLLTPLPSLALETDQASSDKINLESILVS 120

Query: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180
           IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE
Sbjct: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180

Query: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240
           KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADT VFVLDNFDGNSMKV
Sbjct: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTQVFVLDNFDGNSMKV 240

Query: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300
           AELLFKNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS
Sbjct: 241 AELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300

Query: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360
           GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP
Sbjct: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Carg11482 vs. NCBI nr
Match: XP_023548602.1 (rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679.5 bits (1752), Expect = 1.6e-191
Identity = 351/362 (96.96%), Postives = 357/362 (98.62%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPS KPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNP+NP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNP 60

Query: 61  S-KPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILV 120
           S KPL+NPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILV
Sbjct: 61  STKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILV 120

Query: 121 SIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRD 180
           SIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRD
Sbjct: 121 SIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRD 180

Query: 181 EKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMK 240
           EKSLAFLGSPNLRILNKDVVQVVYSEED+DGFVKKVK GFGDGADT VFVLDNFDGNSMK
Sbjct: 181 EKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLDNFDGNSMK 240

Query: 241 VAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQ 300
           VAELLFKNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVHISRRKKAKASKKFGTNGVVQQ
Sbjct: 241 VAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQ 300

Query: 301 SGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSK 360
           S DKEAVPSLKSSNG+IQTSP+HVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSK
Sbjct: 301 SVDKEAVPSLKSSNGDIQTSPIHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSK 360

Query: 361 PR 362
           PR
Sbjct: 361 PR 362

[Close]

BLAST of Carg11482 vs. ExPASy Swiss-Prot
Match: Q56XR7 (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4A PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.3e-63
Identity = 136/248 (54.84%), Postives = 176/248 (70.97%), Query Frame = 0


Query: 52  TPFQNPTNP------SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALET- 111
           +P +N T P       KP++N      K  P H L K++L   ++QL+++  P LA E+ 
Sbjct: 11  SPLRNLTKPCSTSQIPKPIQNS----TKQPPIHLLTKTNLSVTISQLIITS-PVLASESF 70

Query: 112 DQASSD----KINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAI 171
           D  SSD    KI+LESILV+ID+FFN+YPFFVAGCTF +LV  P + +Y LRKYK ISA+
Sbjct: 71  DSISSDPSSGKIDLESILVTIDNFFNKYPFFVAGCTFTYLVVYPAVMFY-LRKYKPISAM 130

Query: 172 DAFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFG 231
           +AFR+++++ ++QLLDIRD K+LA L SPNL+ L K  VQV +SE DE+GF+ KVK  F 
Sbjct: 131 NAFRKLKNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKGSFS 190

Query: 232 DGADTLVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHIS 289
           D  +T+V VLDNFDGNS KVAELL KNGFKEAY I+ G RG+ GW+AIQE LLPP VH+ 
Sbjct: 191 DAENTVVCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGWLAIQEELLPPPVHMY 250

[Close]

BLAST of Carg11482 vs. ExPASy Swiss-Prot
Match: Q9M158 (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR4 PE=1 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 4.2e-25
Identity = 81/225 (36.00%), Postives = 118/225 (52.44%), Query Frame = 0


Query: 58  TNPSKPLRNPHFLFAKTS-PFHQ---LVKSHLPFALTQLLLS----PLPSL----ALETD 117
           + P KP   P+    K+  P  Q   L + +   AL   +LS    P  SL    AL+  
Sbjct: 20  SEPRKPFSLPNLFPPKSQRPISQESFLKRFNGGLALLTSVLSSATAPAKSLTYEEALQQS 79

Query: 118 QASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRK----YKFISAID 177
             +S   + + ++  I +F    P  +AG   +  + +P +    L K    +   SA +
Sbjct: 80  MTTSSSFDSDGLIEGISNFVTDNPLVIAG--GVAALAVPFVLSQVLNKKPKSWGVESAKN 139

Query: 178 AFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGD 237
           A+ ++  D NAQLLDIR       +GSPN++ L K  V  VY+ ED+ GF+KK+   F D
Sbjct: 140 AYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKD 199

Query: 238 GADTLVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWM 267
             +T +++LD FDGNS  VAEL+  NGFK AYAIKDG  G +GW+
Sbjct: 200 PENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL 242

HSP 2 Score: 42.0 bits (97), Expect = 1.7e-02
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 323 VNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 361
           +   ++TE+K K  SR  SPY +YPDLKPPSSP PS+P
Sbjct: 429 ITEPTETEAKPKPHSRPLSPYASYPDLKPPSSPMPSQP 466

[Close]

BLAST of Carg11482 vs. ExPASy Swiss-Prot
Match: Q6ETQ7 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TROL PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.6e-22
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 0


Query: 123 DFFNRYPFFVAGCTFIWLVGIPLIDYYFL----RKYKFISAIDAFRRIRDDPNAQLLDIR 182
           DF  + P  +A    +  V +PL+    L    + Y  +SA  A+R + ++P AQL+DIR
Sbjct: 95  DFVAQNP--LAAAAGVAAVALPLVLAQVLGGASKPYGVVSAAAAYRALVEEPGAQLVDIR 154

Query: 183 DEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSM 242
                   G+P+LR   K    V Y  ED++GF+KK+   F D  +T + +LD FDGNS 
Sbjct: 155 PPGDARQSGAPDLREAKKKAAAVPYDGEDKNGFLKKLSLRFKDPENTTLVILDKFDGNSE 214

Query: 243 KVAELLFKNGFKEAYAIKDGVRGEKGWMA 268
            VAEL+  NG+K A+A+KDG  G +GW++
Sbjct: 215 LVAELVTANGYKAAFAVKDGAEGRRGWLS 241

HSP 2 Score: 37.0 bits (84), Expect = 5.5e-01
Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 302 DKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 361
           + E+  +   S   + ++P+   A +  E+      R  SPYPNYPDLKPPSSP+PS P
Sbjct: 423 ESESESAATESAPAVNSAPV---AEAAPEAAPPAAPRPLSPYPNYPDLKPPSSPSPSAP 478

[Close]

BLAST of Carg11482 vs. ExPASy Swiss-Prot
Match: A2X345 (Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=TROL PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.7e-21
Identity = 58/149 (38.93%), Postives = 85/149 (57.05%), Query Frame = 0


Query: 123 DFFNRYPFFVAGCTFIWLVGIPLIDYYFL----RKYKFISAIDAFRRIRDDPNAQLLDIR 182
           DF  + P   A    +  V +PL+    L    + Y  +SA  A+R + ++P AQL+DIR
Sbjct: 93  DFVAQNPLVAA--AGVAAVALPLVLAQVLGGASKPYGVVSAAAAYRALVEEPGAQLVDIR 152

Query: 183 DEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSM 242
                   G+P+LR   K    V Y  ED++GF+KK+   F D  +T + +LD FDGNS 
Sbjct: 153 PPGDARQSGAPDLREAKKKAAAVPYDGEDKNGFLKKLSLRFKDPENTTLVILDKFDGNSE 212

Query: 243 KVAELLFKNGFKEAYAIKDGVRGEKGWMA 268
            VAEL+  NG+K A+A+KDG  G +GW++
Sbjct: 213 LVAELVTANGYKAAFAVKDGAEGRRGWLS 239

HSP 2 Score: 37.0 bits (84), Expect = 5.5e-01
Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 302 DKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 361
           + E+  +   S   + ++P+   A +  E+      R  SPYPNYPDLKPPSSP+PS P
Sbjct: 421 ESESESAATESAPAVNSAPV---AEAAPEAAPPAAPRPLSPYPNYPDLKPPSSPSPSAP 476

[Close]

BLAST of Carg11482 vs. ExPASy TrEMBL
Match: A0A6J1GPW4 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456414 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 2.1e-197
Identity = 359/362 (99.17%), Postives = 360/362 (99.45%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60

Query: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120
           SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS
Sbjct: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120

Query: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180
           IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE
Sbjct: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180

Query: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240
           KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV
Sbjct: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240

Query: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300
           AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQ+S
Sbjct: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQKS 300

Query: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360
            DKEAVPSL SSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP
Sbjct: 301 VDKEAVPSLNSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Carg11482 vs. ExPASy TrEMBL
Match: A0A6J1JM16 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488109 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 7.5e-195
Identity = 354/362 (97.79%), Postives = 357/362 (98.62%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPTNP 60
           MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNG H P+INKTPFQNPTNP
Sbjct: 1   MESHSLYLSSSSLFLHKLPSHKPISLSPSLIPFNSKPLSVFNGTHFPSINKTPFQNPTNP 60

Query: 61  SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVS 120
           S PLRNPHFLFAKTSPF QLVKSHLPFALTQLLL+PLPSLALETDQASSDKINLESILVS
Sbjct: 61  SNPLRNPHFLFAKTSPFLQLVKSHLPFALTQLLLTPLPSLALETDQASSDKINLESILVS 120

Query: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180
           IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE
Sbjct: 121 IDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDE 180

Query: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDNFDGNSMKV 240
           KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADT VFVLDNFDGNSMKV
Sbjct: 181 KSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTQVFVLDNFDGNSMKV 240

Query: 241 AELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300
           AELLFKNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS
Sbjct: 241 AELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQS 300

Query: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360
           GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP
Sbjct: 301 GDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 360

Query: 361 RT 363
           RT
Sbjct: 361 RT 362

[Close]

BLAST of Carg11482 vs. ExPASy TrEMBL
Match: A0A5D3B9W6 (Rhodanese-like domain-containing protein 4A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00060 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.0e-155
Identity = 301/368 (81.79%), Postives = 320/368 (86.96%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFL------HKLPSHKPISLSPSLIPF-NSKPLSVFNGAHLPTINKTP 60
           MESHSLYLSSSS FL      HKL S KPIS  PSLIPF NSKPL+VFNG H  +IN+T 
Sbjct: 1   MESHSLYLSSSSPFLSSHRTIHKLSSEKPISRPPSLIPFANSKPLTVFNGPHFSSINRTS 60

Query: 61  FQNPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQ-LLLSPLPSLALETDQASSDKI 120
           F +PT PS    NP FLFAKTSP  QL K H PFALTQ LLL+PLPS ALETD ASSDKI
Sbjct: 61  FPSPTIPS----NPRFLFAKTSPILQLTKPHFPFALTQLLLLTPLPSFALETDLASSDKI 120

Query: 121 NLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNA 180
           NLESILVSID+FFNRYPFFVAGCTFIWLV IPLIDYYF+RKYKFISAIDAFR+IRD+PNA
Sbjct: 121 NLESILVSIDEFFNRYPFFVAGCTFIWLVVIPLIDYYFIRKYKFISAIDAFRKIRDEPNA 180

Query: 181 QLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDN 240
           QLLD+R+EKSLA LGSPNLRILNKDVV+VVYSEEDEDGFVKKVKK FGD ADT+VFVLDN
Sbjct: 181 QLLDVREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDCADTIVFVLDN 240

Query: 241 FDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFG 300
           FDGNSMKVAELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+ RRKK KAS+K G
Sbjct: 241 FDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASQKLG 300

Query: 301 TNGVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360
           TNGVVQQ+GD E VPSLKSSN EIQ S +HVNASS  ES+LKT SR SSPYPNYPDLKPP
Sbjct: 301 TNGVVQQNGDNETVPSLKSSNREIQPSQVHVNASSPAESQLKTWSRPSSPYPNYPDLKPP 360

[Close]

BLAST of Carg11482 vs. ExPASy TrEMBL
Match: A0A1S3C7N8 (rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497630 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.0e-155
Identity = 301/368 (81.79%), Postives = 320/368 (86.96%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFL------HKLPSHKPISLSPSLIPF-NSKPLSVFNGAHLPTINKTP 60
           MESHSLYLSSSS FL      HKL S KPIS  PSLIPF NSKPL+VFNG H  +IN+T 
Sbjct: 1   MESHSLYLSSSSPFLSSHRTIHKLSSEKPISRPPSLIPFANSKPLTVFNGPHFSSINRTS 60

Query: 61  FQNPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQ-LLLSPLPSLALETDQASSDKI 120
           F +PT PS    NP FLFAKTSP  QL K H PFALTQ LLL+PLPS ALETD ASSDKI
Sbjct: 61  FPSPTIPS----NPRFLFAKTSPILQLTKPHFPFALTQLLLLTPLPSFALETDLASSDKI 120

Query: 121 NLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNA 180
           NLESILVSID+FFNRYPFFVAGCTFIWLV IPLIDYYF+RKYKFISAIDAFR+IRD+PNA
Sbjct: 121 NLESILVSIDEFFNRYPFFVAGCTFIWLVVIPLIDYYFIRKYKFISAIDAFRKIRDEPNA 180

Query: 181 QLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDN 240
           QLLD+R+EKSLA LGSPNLRILNKDVV+VVYSEEDEDGFVKKVKK FGD ADT+VFVLDN
Sbjct: 181 QLLDVREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDCADTIVFVLDN 240

Query: 241 FDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFG 300
           FDGNSMKVAELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+ RRKK KAS+K G
Sbjct: 241 FDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASQKLG 300

Query: 301 TNGVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360
           TNGVVQQ+GD E VPSLKSSN EIQ S +HVNASS  ES+LKT SR SSPYPNYPDLKPP
Sbjct: 301 TNGVVQQNGDNETVPSLKSSNREIQPSQVHVNASSPAESQLKTWSRPSSPYPNYPDLKPP 360

[Close]

BLAST of Carg11482 vs. ExPASy TrEMBL
Match: A0A0A0K8H6 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368730 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 9.3e-153
Identity = 297/368 (80.71%), Postives = 319/368 (86.68%), Query Frame = 0


Query: 1   MESHSLYLSSSSLFL------HKLPSHKPISLSPSLIPF-NSKPLSVFNGAHLPTINKTP 60
           MESHSLYLSSSS  L      HKL S KPIS  PSLIPF NSKPL+VFNG    +IN+TP
Sbjct: 1   MESHSLYLSSSSPSLQSHRAIHKLSSQKPISPPPSLIPFANSKPLTVFNGPRFSSINRTP 60

Query: 61  FQNPTNPSKPLRNPHFLFAKTSPFHQLVKSHLPFALTQ-LLLSPLPSLALETDQASSDKI 120
           F +PT PS    NP FLFAKTSPF QL+K H PFALTQ LLL+PLPS ALETD ASSDKI
Sbjct: 61  FPSPTIPS----NPPFLFAKTSPFLQLMKPHFPFALTQLLLLTPLPSFALETDLASSDKI 120

Query: 121 NLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNA 180
           +LESILVSID+FFNRYPFFVAGCTFIWLV IP IDYYF+RKYKFISAI+AFR+IRD+PNA
Sbjct: 121 SLESILVSIDEFFNRYPFFVAGCTFIWLVVIPSIDYYFIRKYKFISAINAFRKIRDEPNA 180

Query: 181 QLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGDGADTLVFVLDN 240
           QLLD+R+EKSLA LGSPNLRILNKDVV+VVYSEEDEDGFVKKVKK FGD ADT+VFVLDN
Sbjct: 181 QLLDVREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDDADTIVFVLDN 240

Query: 241 FDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHISRRKKAKASKKFG 300
           FDGNSMK AELL KNGFKEAYAIKDGVRGEKGW+AIQESLLPPSVH+ RRKK KAS K G
Sbjct: 241 FDGNSMKAAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASPKLG 300

Query: 301 TNGVVQQSGDKEAVPSLKSSNGEIQTSPLHVNASSDTESKLKTRSRSSSPYPNYPDLKPP 360
           TNGVVQQ+GD EAVPSLKSSN EIQ S +HVNASS  ES+LKT+SR SSPYPNYPDLKPP
Sbjct: 301 TNGVVQQNGDNEAVPSLKSSNREIQPSHVHVNASSPAESQLKTQSRPSSPYPNYPDLKPP 360

[Close]

BLAST of Carg11482 vs. TAIR 10
Match: AT3G25480.1 (Rhodanese/Cell cycle control phosphatase superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 1.6e-64
Identity = 136/248 (54.84%), Postives = 176/248 (70.97%), Query Frame = 0


Query: 52  TPFQNPTNP------SKPLRNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALET- 111
           +P +N T P       KP++N      K  P H L K++L   ++QL+++  P LA E+ 
Sbjct: 11  SPLRNLTKPCSTSQIPKPIQNS----TKQPPIHLLTKTNLSVTISQLIITS-PVLASESF 70

Query: 112 DQASSD----KINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAI 171
           D  SSD    KI+LESILV+ID+FFN+YPFFVAGCTF +LV  P + +Y LRKYK ISA+
Sbjct: 71  DSISSDPSSGKIDLESILVTIDNFFNKYPFFVAGCTFTYLVVYPAVMFY-LRKYKPISAM 130

Query: 172 DAFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFG 231
           +AFR+++++ ++QLLDIRD K+LA L SPNL+ L K  VQV +SE DE+GF+ KVK  F 
Sbjct: 131 NAFRKLKNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKGSFS 190

Query: 232 DGADTLVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWMAIQESLLPPSVHIS 289
           D  +T+V VLDNFDGNS KVAELL KNGFKEAY I+ G RG+ GW+AIQE LLPP VH+ 
Sbjct: 191 DAENTVVCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGWLAIQEELLPPPVHMY 250

[Close]

BLAST of Carg11482 vs. TAIR 10
Match: AT4G01050.1 (thylakoid rhodanese-like )

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-26
Identity = 81/225 (36.00%), Postives = 118/225 (52.44%), Query Frame = 0


Query: 58  TNPSKPLRNPHFLFAKTS-PFHQ---LVKSHLPFALTQLLLS----PLPSL----ALETD 117
           + P KP   P+    K+  P  Q   L + +   AL   +LS    P  SL    AL+  
Sbjct: 20  SEPRKPFSLPNLFPPKSQRPISQESFLKRFNGGLALLTSVLSSATAPAKSLTYEEALQQS 79

Query: 118 QASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRK----YKFISAID 177
             +S   + + ++  I +F    P  +AG   +  + +P +    L K    +   SA +
Sbjct: 80  MTTSSSFDSDGLIEGISNFVTDNPLVIAG--GVAALAVPFVLSQVLNKKPKSWGVESAKN 139

Query: 178 AFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDEDGFVKKVKKGFGD 237
           A+ ++  D NAQLLDIR       +GSPN++ L K  V  VY+ ED+ GF+KK+   F D
Sbjct: 140 AYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKD 199

Query: 238 GADTLVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWM 267
             +T +++LD FDGNS  VAEL+  NGFK AYAIKDG  G +GW+
Sbjct: 200 PENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL 242

HSP 2 Score: 42.0 bits (97), Expect = 1.2e-03
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0


Query: 323 VNASSDTESKLKTRSRSSSPYPNYPDLKPPSSPTPSKP 361
           +   ++TE+K K  SR  SPY +YPDLKPPSSP PS+P
Sbjct: 429 ITEPTETEAKPKPHSRPLSPYASYPDLKPPSSPMPSQP 466

The following BLAST results are available for this feature:

BLAST of Carg11482 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014541.1	3.6e-199	100.00	Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita a...	[more]
KAG6576020.1	2.0e-197	98.90	Rhodanese-like domain-containing protein 4A, chloroplastic, partial [Cucurbita a...	[more]
XP_022954032.1	4.4e-197	99.17	rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita moschata]	[more]
XP_022991517.1	1.6e-194	97.79	rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita maxima]	[more]
XP_023548602.1	1.6e-191	96.96	rhodanese-like domain-containing protein 4A, chloroplastic [Cucurbita pepo subsp...	[more]

BLAST of Carg11482 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XR7	2.3e-63	54.84	Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thalia...	[more]
Q9M158	4.2e-25	36.00	Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thalian...	[more]
Q6ETQ7	9.6e-22	38.93	Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. japonica ...	[more]
A2X345	3.7e-21	38.93	Protein THYLAKOID RHODANESE-LIKE, chloroplastic OS=Oryza sativa subsp. indica OX...	[more]

BLAST of Carg11482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPW4	2.1e-197	99.17	rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita moschata...	[more]
A0A6J1JM16	7.5e-195	97.79	rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucurbita maxima O...	[more]
A0A5D3B9W6	2.0e-155	81.79	Rhodanese-like domain-containing protein 4A OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C7N8	2.0e-155	81.79	rhodanese-like domain-containing protein 4A, chloroplastic OS=Cucumis melo OX=36...	[more]
A0A0A0K8H6	9.3e-153	80.71	Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G368730 P...	[more]

BLAST of Carg11482 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25480.1	1.6e-64	54.84	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT4G01050.1	3.0e-26	36.00	thylakoid rhodanese-like	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 153..279 e-value: 1.7E-29 score: 104.3
IPR036873	Rhodanese-like domain superfamily	SUPERFAMILY	52821	Rhodanese/Cell cycle control phosphatase	coord: 140..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 345..362
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..362
None	No IPR available	PANTHER	PTHR47377:SF3	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4A, CHLOROPLASTIC	coord: 35..361
IPR044240	Rhodanese-like domain-containing protein STR4-like	PANTHER	PTHR47377	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 35..361

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11482-RA	Carg11482-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane