Carg11282 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCTCGAATGTTCTTCCTGTGCACCAAAGAATTATCCAGAAGGTCGTGGATGTTGGCGGCGATTAGAGTTTTAAACCTCGCGTCTTCCTAACCTGGCTCACTTCTGATCTCCCATGGCTCTCAACCCTAATCTGTTTCCAAATGGCATGCCCGTTCCCTTCACCAACGAGCTTTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGGTTGATAAGATCCCCGGGTTAGTTCTATATCTCCTTTATTTCCTTTTCGATAACCATTACGCGACCGACCATTGTAATTGAACTAATTTGGGAATTTGCTGTGTGGATGATTCCTAAATTTGTGTCATATGATGGTTGCTTATTTTGTTTCTGTTTTTCTAAATTTTTCCTGGTTGAATCAGTAATCCGATTTTCGAATTTGAGTTGATTCTGGGTACAGAGTCATTCTGATTGACCTTAATCGTGGGGACGTCTTTTATAACTTTATTTAGTGTACACTGGGTTCGACGGGGTTGAGGTGTGATTGATTATTGAAGGTACCATAATGCCTACGCGAGGAATCGCTGAATTTGGGAACTTAATCTTTTTTATTACAATGTTATTGCGTTGACTGATTTGACCTTGTTCAATTCAATAGTAAAACATAGATTCTTCTCCTTTTTGGTTTTGGAACCAGCTAGAACAGGACAGACTTATAGAACTAGTTTCTTGGACTTCTTTAGTACCTGGATCTTAAATTCTATGGTAGAGGAGTTATGGAGATTTCGGAAAATTTTCCATCTGTTATTAACCATCGTTATATTCTTCATTTTTCTCGATTTGTGCATGTCATCCTAGTACAGGGGCCATGCTAATGTTCTTTGTATAGTTCCAGTTTTATCAGATTTCTTCGTAGGGAGATCTTTATATTATTCATATTATATGGTTACCCGATCTCTCTTTTTTCAGAATCTGTTTCTGGCAGTTTGATTAATTTTATTTATGAAGGTATTCTGAGCGAGGGAAGTATGGTAGATTAAGCTAGACATGAAAAATTTTAAGAACTCATTACTTAATTCTTTGAATAAAGAATGCAGCTGTTTGGCATATATGGAAAATGTAGATACTATGTTTCAAAAATGTTTATATATTGGAACTCTTTTTAAATTTCATGAAGTCAAGTTCGGACTTTTTGAGTTAATATACTCATGGATGCTTTAAAATTTTTCTTGTTTCAAATATTAAAAACTAGTTGCTTGTCTGCATTGTGTGTATGTATACCTGCAAGAGAGATTCATCCAGTTCTTTGTGCATCCATCACTTCTTGTATGAACGAAAGTAAGGAATTTGGGTGTTTAGCCAAAGGGGCAATCTCTGTTTGGCTACAATGCCAAATAGCTATTAAATACCATATTTAGCTATACTGTCGTACATTTGACTTGAGAGGAAAGAAAAGATTTTCAAAGTGGTGATGTGATTCTTAGAGGAGGAATTTCATATTCGATTAGTAATGTGTCTTTGGGTGTGGACTAAAGAATTTTGCAATCATTTTGAACAATTTGAGCCTCTTTTCCTAGTGGTTATTTTTTTCATGGGCAGTTTGTATGTCCATTTCTGCTATGAAAGTTTGGTTTTTCATAAAAGGCAAAGAAAAAATAAAGTTAAGGGTTGGCCATTGAAAGTATCAGTCAATAAGAAAAGTATTGGTCAAGTGCCTAGTGGAGCAACTAGTAGTCTATATGATTTGGACATCCGGGCGAGTTAGTACAAATCGAGCAAAGAGGGAGGTAACTCAAGAGAATGAGTTACCTGCCCTAGGGAAGTGTCCACAGTATTGTGAGTGGATTTCATTGGTCAATCCATGTTGGCTGTTTAATCCTGCCATGTGCTTGAGAGAACACCGGAAGTTTCTCTATGAATTAGAGTGGACGTGCCTCATTGGAGAGAGAGTTCAGTGACCAACGTTTGCTCCAATGAGGAGTGTCAGGCTATCATGATGATGAGGAAACATGCTTGAACGAAATGATAATGTTGACTATTTGCAATTACAGGCGGCTTAAGAAGAGTAGGCTAAAGGGGAGAGACGACAAGAGAAGCACACCATTAAGAGAGTGTGTTAGTGGTGTGCTTGCAAGTCTCATCCAAGAGGTAGCATCCTTCGGCCAAATGGGCCCAAGCTTGAAACCAAGAGTTGCATTGGAAATAGAGCTTGTCAGTTTTCCATGAAGCAGGTATCTGCTTTAGTTTGAGAGTAGATGAGAGTGAGGTTCATTCAATGAGGTAATCTCATAGTCAATTCTGTTAGTATAATAGTGTTTAGCACAAAAATAGCACATAGTAGTGTGTTAGACCTTACCTTAGGAAAATAAAGGATTATTATTGGGGGACACAACCATTGCACCTGGGAGGAGTGAATTACTACTCAGATGAAGCAAGTGAGAGAGTGGATGACAACAAGTAAGTCATACGTCGAGCCAACTACCAACTGAATTTTCCTATGAAGGAGAACGACGCAGTGGCAAACCATGAATGGGGAAAATAGCAAAAGTTAAGCATGAGTTGGGAACTCCCAAGTTAGTGAATGTACGATTGGAGTCACATCATTGATGCATGAGTGTGTAAGCTGTTGCTAGGGAAAAAAAAGGTGGGGGAAAGTATGACTTGTAGTTTTAGTGTGCATGCTATTGCTAGAAAACAAGGTGGGGGGATTTGGTCGAGTGGGTAGAGTCCCATGTCTAGCAACAGATATTTGGTCTTTATTGATGGAAGGTTTAGGTGAGAGAACTATAGCCTTAAGAGGCCAGAGGTAAGATTATCTTTTCTCCGAACTTCCATGTGTCTTATTTAAAGGTTTTTTGCTTTTTAATGTACAAGATAATCTTCTTACAATCTGTTCCTATTCTAGGGTTAGCACTAGGCTTGAGAATAAACACACAAAAAGCTGTGGGATTAATTTTCCAGCTCAATACCATCTGAGGTTGCATTTGAATCTTTGACCTCATGGTTATGATTATATGTTTTAACTAATTGAGCTATGCTAAAGTTAACAAGTTGTTGAGATTATTTAGGACCTAAGATCTATGTGATTTTTGTCCATTGAATTCTAGGGCAAATACTTGTCCTTTCACACTTCACCATCTTGTCATGTTACAGTAACTTTCCACATCTAGTTCATGAATAAGGAAGTAGTGTAGGTAGGATGAACTATCACAAAGCCTCACACATAAAAGAATGAGGTTGAAGTGTGAGCTGCCCGGTCTTACACAGTGTCACTCTGCCCCTTTTTTATTTGGTTATGCTTTCCTCACACATGAAAAAATCTTTACGAGGGTATCTAGAACTTTCCGAAACAATCTTGGTGAAAAAATGTTAAGAGAAAATGTTAGAAGCTTTATTTGGGGTTGTAATGGCCATGAAAGGCAAGTACTCTTCTCATTAATGGGGGGGGGAACTTCTGTGAGCCAAGAGGGGATGTTGTTGCCGCTTATCCTCACTCTTAGGAATGTGGCTTTGGGTGTCTATTAAGGTGTGCCAGCTTTCTTTCCAGAAAAATTCCTCGTGGTACAATATGTTGACTAGGAAGGACAAAAGGTGAACTTCTAGGAGCCTGGACAATTGTGGCAATACGGGGTTACATGTTGGGTTGACCATTAGTTCCTCGAGCTCATTTTTCTATGGCTTGTGATAAATCTTATCTTAACTGGTAGGTATTTTCTTGGCTCGTATATATATCTTGTTGCTTAATGGCTAACAAGGTCCTAGTTCAACTCCTTTCTGGGACGAAGGGAAAAGGCTTGTGGAAGACTACTTATTTTTTCATCTAATGGAATATCTGATTTGAAAGGAAGAATAAAATTTTTAGAGATGTGGATAAGGTATGGGAAAAGGTCTGTTTGTAGCCTGGTCCAAATGGATTCTGCTGGTTTTGCCTTTTCTTTTCTTTTTTTTATGTACATTTTAGAAGTTCAATAAGATTTCATGTTGCTCCTTTTTTGTATGCAATTTTCCCTTCTGAAAAGATTTTTGTCCCTTATATTAAAAATAAAAAGATATAATATCCCATTCTGACACCTTTTACCGGCAATAATTGCCTCTTTGTATCAATTTGGATGAACTTGGTTGTAAGTGGCAGAGATGGTGCATGAGCGTAATGGATTTTACCTCTCTTTCAGGGCTTCGAGTGATCGTGTGAAAGCAAAAGGGACTGTTTACTTGTCAAATGTACGCATGGTGTTTGTGTCAAGTAAACCAGATCCATACTTCACTGCATTTGACATGCCTTTGGTAAGCTTTCACTCTTTATGTTTACTTGCCTTCTTGATGCCTTTTGTCCTTATAATTGTCCATCTTTGGAAACTGAATTGGTGAGAATTCTCCTGCATAAACGAAAGATAGAACTACATTGCAATATCAAAGGAATTACCATATCCATAGGTTTTAAGAAGGTTGTCTCTCCGACAATCCACCCACTATGGACTGGCGCACCAAAATATGACCTCCCCTCCACAAATCCTAGCTCATATTTATAACCAAGTCATCTCTATCTAATTATCACTATATCCTTTATAATATCTCACTAATATTCCCAATATATCTTCTAATAGTACTATTTACACAATCTTCATGAAAATGCCCTAATAAAATCTAATAATTTGTCGAGTTTGCAACTTATTCATAATCCTAGTATGGGCCTCTTATATTTGTGTGTCCATATTTTTAGACCTAAATAGCTGTTGGATTGTGTTATTCTATTCGACATTTTGTTGCATTGCTATCTAATATTTTACTTGTTGCGCTTGCAGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTTGAACCTGTAAGCATGCGAACTATTAGATCACATCTTGTTTAGTGTGTCCGTGTGCTACTTTAGAAAGCCTAGCTAATAGCTTATTACAGGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCATTTAAGATTTTGTTCAAGGAAGGAGGATGTGGTACCTTTGTACCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCTCAAGTTGATCCATTGCAGGCAGCACAAACTCCTGTCGATGAAATGATGAGACATGCGTGAGTAGCGTTGATTCTCATCGAATTCAATCCCATTGTCAAGTTGGAATTTGTCATTTGATTATGTTTTTGATGTTTAACTTGCAGCTATGTGGATCCAAATGACCCGACGAGGATCTTCTTACAACAGCCAACAGCGGAGTCCCAGTTAAGGAGGCGCACATACCAATCCCAACCAGCCGAAAATGCAATGTGAAGTTAGTGGAATTTCGATCTCGTACTATAGATTTGTTCGTTGGTTGGCACTTTGTTGTTACTTGTACAGTTGAAGAATGTGTTGAATTTAAAGTTACATGAGGTAGACTCATTTGTCATTTACAAAAGCTTCGACTCAACTCTTCCAATACGTTATATAGCCCTGTTGGTGCATGATGGCATCGGTTCTGTGATATATGGCTTTTGACTGCTATTGGTCTTTGTGCTTTTGAAGTATGCCATTAATTTGTGGCTCCTTTCTTTGTAGCTGATTGGATTGTCATAAGTTGGTTTGATGACGATCTTCCCAATTGATTAGTACTAAAGATGAAGACAAAACACTATAAGTACGAGAGATATTTTTAGACAAGCACGAGAGAAATTTAAAAAATAAATGTGCGATACTAAAATGATTTTTTTTGGAAAAAAAATATCCGATAAGGCCTTGCAAATTCCCTATTCCTTTGGAATTTTTTCCTTGATAGATGACGATCCATAGGCAACAACTAGGGGTAGGGGCTTCGTGCTTCATCTACTTTGCTCTACATCGTCCTTACGACCCTATGAACTCTTGATACAATGTCGACCAAGAAAACTCCATGCTACAT ATTTCTCGAATGTTCTTCCTGTGCACCAAAGAATTATCCAGAAGGTCGTGGATGTTGGCGGCGATTAGAGTTTTAAACCTCGCGTCTTCCTAACCTGGCTCACTTCTGATCTCCCATGGCTCTCAACCCTAATCTGTTTCCAAATGGCATGCCCGTTCCCTTCACCAACGAGCTTTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGGTTGATAAGATCCCCGGGGCTTCGAGTGATCGTGTGAAAGCAAAAGGGACTGTTTACTTGTCAAATGTACGCATGGTGTTTGTGTCAAGTAAACCAGATCCATACTTCACTGCATTTGACATGCCTTTGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTTGAACCTGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCATTTAAGATTTTGTTCAAGGAAGGAGGATGTGGTACCTTTGTACCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCTCAAGTTGATCCATTGCAGGCAGCACAAACTCCTGTCGATGAAATGATGAGACATGCCTATGTGGATCCAAATGACCCGACGAGGATCTTCTTACAACAGCCAACAGCGGAGTCCCAGTTAAGGAGGCGCACATACCAATCCCAACCAGCCGAAAATGCAATGTGAAGTTAGTGGAATTTCGATCTCGTACTATAGATTTGTTCGTTGGTTGGCACTTTGTTGTTACTTGTACAGTTGAAGAATGTGTTGAATTTAAAGTTACATGAGGTAGACTCATTTGTCATTTACAAAAGCTTCGACTCAACTCTTCCAATACGTTATATAGCCCTGTTGGTGCATGATGGCATCGGTTCTGTGATATATGGCTTTTGACTGCTATTGGTCTTTGTGCTTTTGAAGTATGCCATTAATTTGTGGCTCCTTTCTTTGTAGCTGATTGGATTGTCATAAGTTGGTTTGATGACGATCTTCCCAATTGATTAGTACTAAAGATGAAGACAAAACACTATAAGTACGAGAGATATTTTTAGACAAGCACGAGAGAAATTTAAAAAATAAATGTGCGATACTAAAATGATTTTTTTTGGAAAAAAAATATCCGATAAGGCCTTGCAAATTCCCTATTCCTTTGGAATTTTTTCCTTGATAGATGACGATCCATAGGCAACAACTAGGGGTAGGGGCTTCGTGCTTCATCTACTTTGCTCTACATCGTCCTTACGACCCTATGAACTCTTGATACAATGTCGACCAAGAAAACTCCATGCTACAT ATGGCTCTCAACCCTAATCTGTTTCCAAATGGCATGCCCGTTCCCTTCACCAACGAGCTTTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGGTTGATAAGATCCCCGGGGCTTCGAGTGATCGTGTGAAAGCAAAAGGGACTGTTTACTTGTCAAATGTACGCATGGTGTTTGTGTCAAGTAAACCAGATCCATACTTCACTGCATTTGACATGCCTTTGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTTGAACCTGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCATTTAAGATTTTGTTCAAGGAAGGAGGATGTGGTACCTTTGTACCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCTCAAGTTGATCCATTGCAGGCAGCACAAACTCCTGTCGATGAAATGATGAGACATGCCTATGTGGATCCAAATGACCCGACGAGGATCTTCTTACAACAGCCAACAGCGGAGTCCCAGTTAAGGAGGCGCACATACCAATCCCAACCAGCCGAAAATGCAATGTGA MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVSSKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTAESQLRRRTYQSQPAENAM Homology
BLAST of Carg11282 vs. NCBI nr
Match: KAG7018140.1 (SPAC29B12.11c [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of Carg11282 vs. NCBI nr
Match: KAG6581646.1 (hypothetical protein SDJN03_21648, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 416.4 bits (1069), Expect = 1.4e-112 Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg11282 vs. NCBI nr
Match: XP_022983649.1 (uncharacterized protein LOC111482201 [Cucurbita maxima] >XP_023526417.1 uncharacterized protein LOC111789925 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 414.8 bits (1065), Expect = 4.1e-112 Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg11282 vs. NCBI nr
Match: XP_022934071.1 (uncharacterized protein LOC111441354 [Cucurbita moschata]) HSP 1 Score: 414.1 bits (1063), Expect = 7.0e-112 Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg11282 vs. NCBI nr
Match: XP_038903065.1 (uncharacterized protein LOC120089752 [Benincasa hispida]) HSP 1 Score: 408.7 bits (1049), Expect = 3.0e-110 Identity = 194/202 (96.04%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy Swiss-Prot
Match: P97765 (WW domain-binding protein 2 OS=Mus musculus OX=10090 GN=Wbp2 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.2e-06 Identity = 39/129 (30.23%), Postives = 61/129 (47.29%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy Swiss-Prot
Match: Q969T9 (WW domain-binding protein 2 OS=Homo sapiens OX=9606 GN=WBP2 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.4e-06 Identity = 39/129 (30.23%), Postives = 60/129 (46.51%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy Swiss-Prot
Match: Q8R478 (WW domain-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Wbp2 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06 Identity = 39/129 (30.23%), Postives = 60/129 (46.51%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A6J1J814 (uncharacterized protein LOC111482201 OS=Cucurbita maxima OX=3661 GN=LOC111482201 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.0e-112 Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A6J1F0U4 (uncharacterized protein LOC111441354 OS=Cucurbita moschata OX=3662 GN=LOC111441354 PE=4 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.4e-112 Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A5A7T2S6 (UPF0664 stress-induced protein C29B12.11c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00010 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 9.3e-110 Identity = 193/202 (95.54%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A1S3CPS8 (uncharacterized protein LOC103502837 OS=Cucumis melo OX=3656 GN=LOC103502837 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 9.3e-110 Identity = 193/202 (95.54%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A0A0LI97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845430 PE=4 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.5e-109 Identity = 192/202 (95.05%), Postives = 198/202 (98.02%), Query Frame = 0
BLAST of Carg11282 vs. TAIR 10
Match: AT5G11680.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 333.2 bits (853), Expect = 1.5e-91 Identity = 161/207 (77.78%), Postives = 173/207 (83.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|