Carg11282 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11282
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UPF0664 stress-induced protein C29B12.11c
Location	Carg_Chr14: 6144854 .. 6150787 (-)
RNA-Seq Expression	Carg11282
Synteny	Carg11282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTCGAATGTTCTTCCTGTGCACCAAAGAATTATCCAGAAGGTCGTGGATGTTGGCGGCGATTAGAGTTTTAAACCTCGCGTCTTCCTAACCTGGCTCACTTCTGATCTCCCATGGCTCTCAACCCTAATCTGTTTCCAAATGGCATGCCCGTTCCCTTCACCAACGAGCTTTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGGTTGATAAGATCCCCGGGTTAGTTCTATATCTCCTTTATTTCCTTTTCGATAACCATTACGCGACCGACCATTGTAATTGAACTAATTTGGGAATTTGCTGTGTGGATGATTCCTAAATTTGTGTCATATGATGGTTGCTTATTTTGTTTCTGTTTTTCTAAATTTTTCCTGGTTGAATCAGTAATCCGATTTTCGAATTTGAGTTGATTCTGGGTACAGAGTCATTCTGATTGACCTTAATCGTGGGGACGTCTTTTATAACTTTATTTAGTGTACACTGGGTTCGACGGGGTTGAGGTGTGATTGATTATTGAAGGTACCATAATGCCTACGCGAGGAATCGCTGAATTTGGGAACTTAATCTTTTTTATTACAATGTTATTGCGTTGACTGATTTGACCTTGTTCAATTCAATAGTAAAACATAGATTCTTCTCCTTTTTGGTTTTGGAACCAGCTAGAACAGGACAGACTTATAGAACTAGTTTCTTGGACTTCTTTAGTACCTGGATCTTAAATTCTATGGTAGAGGAGTTATGGAGATTTCGGAAAATTTTCCATCTGTTATTAACCATCGTTATATTCTTCATTTTTCTCGATTTGTGCATGTCATCCTAGTACAGGGGCCATGCTAATGTTCTTTGTATAGTTCCAGTTTTATCAGATTTCTTCGTAGGGAGATCTTTATATTATTCATATTATATGGTTACCCGATCTCTCTTTTTTCAGAATCTGTTTCTGGCAGTTTGATTAATTTTATTTATGAAGGTATTCTGAGCGAGGGAAGTATGGTAGATTAAGCTAGACATGAAAAATTTTAAGAACTCATTACTTAATTCTTTGAATAAAGAATGCAGCTGTTTGGCATATATGGAAAATGTAGATACTATGTTTCAAAAATGTTTATATATTGGAACTCTTTTTAAATTTCATGAAGTCAAGTTCGGACTTTTTGAGTTAATATACTCATGGATGCTTTAAAATTTTTCTTGTTTCAAATATTAAAAACTAGTTGCTTGTCTGCATTGTGTGTATGTATACCTGCAAGAGAGATTCATCCAGTTCTTTGTGCATCCATCACTTCTTGTATGAACGAAAGTAAGGAATTTGGGTGTTTAGCCAAAGGGGCAATCTCTGTTTGGCTACAATGCCAAATAGCTATTAAATACCATATTTAGCTATACTGTCGTACATTTGACTTGAGAGGAAAGAAAAGATTTTCAAAGTGGTGATGTGATTCTTAGAGGAGGAATTTCATATTCGATTAGTAATGTGTCTTTGGGTGTGGACTAAAGAATTTTGCAATCATTTTGAACAATTTGAGCCTCTTTTCCTAGTGGTTATTTTTTTCATGGGCAGTTTGTATGTCCATTTCTGCTATGAAAGTTTGGTTTTTCATAAAAGGCAAAGAAAAAATAAAGTTAAGGGTTGGCCATTGAAAGTATCAGTCAATAAGAAAAGTATTGGTCAAGTGCCTAGTGGAGCAACTAGTAGTCTATATGATTTGGACATCCGGGCGAGTTAGTACAAATCGAGCAAAGAGGGAGGTAACTCAAGAGAATGAGTTACCTGCCCTAGGGAAGTGTCCACAGTATTGTGAGTGGATTTCATTGGTCAATCCATGTTGGCTGTTTAATCCTGCCATGTGCTTGAGAGAACACCGGAAGTTTCTCTATGAATTAGAGTGGACGTGCCTCATTGGAGAGAGAGTTCAGTGACCAACGTTTGCTCCAATGAGGAGTGTCAGGCTATCATGATGATGAGGAAACATGCTTGAACGAAATGATAATGTTGACTATTTGCAATTACAGGCGGCTTAAGAAGAGTAGGCTAAAGGGGAGAGACGACAAGAGAAGCACACCATTAAGAGAGTGTGTTAGTGGTGTGCTTGCAAGTCTCATCCAAGAGGTAGCATCCTTCGGCCAAATGGGCCCAAGCTTGAAACCAAGAGTTGCATTGGAAATAGAGCTTGTCAGTTTTCCATGAAGCAGGTATCTGCTTTAGTTTGAGAGTAGATGAGAGTGAGGTTCATTCAATGAGGTAATCTCATAGTCAATTCTGTTAGTATAATAGTGTTTAGCACAAAAATAGCACATAGTAGTGTGTTAGACCTTACCTTAGGAAAATAAAGGATTATTATTGGGGGACACAACCATTGCACCTGGGAGGAGTGAATTACTACTCAGATGAAGCAAGTGAGAGAGTGGATGACAACAAGTAAGTCATACGTCGAGCCAACTACCAACTGAATTTTCCTATGAAGGAGAACGACGCAGTGGCAAACCATGAATGGGGAAAATAGCAAAAGTTAAGCATGAGTTGGGAACTCCCAAGTTAGTGAATGTACGATTGGAGTCACATCATTGATGCATGAGTGTGTAAGCTGTTGCTAGGGAAAAAAAAGGTGGGGGAAAGTATGACTTGTAGTTTTAGTGTGCATGCTATTGCTAGAAAACAAGGTGGGGGGATTTGGTCGAGTGGGTAGAGTCCCATGTCTAGCAACAGATATTTGGTCTTTATTGATGGAAGGTTTAGGTGAGAGAACTATAGCCTTAAGAGGCCAGAGGTAAGATTATCTTTTCTCCGAACTTCCATGTGTCTTATTTAAAGGTTTTTTGCTTTTTAATGTACAAGATAATCTTCTTACAATCTGTTCCTATTCTAGGGTTAGCACTAGGCTTGAGAATAAACACACAAAAAGCTGTGGGATTAATTTTCCAGCTCAATACCATCTGAGGTTGCATTTGAATCTTTGACCTCATGGTTATGATTATATGTTTTAACTAATTGAGCTATGCTAAAGTTAACAAGTTGTTGAGATTATTTAGGACCTAAGATCTATGTGATTTTTGTCCATTGAATTCTAGGGCAAATACTTGTCCTTTCACACTTCACCATCTTGTCATGTTACAGTAACTTTCCACATCTAGTTCATGAATAAGGAAGTAGTGTAGGTAGGATGAACTATCACAAAGCCTCACACATAAAAGAATGAGGTTGAAGTGTGAGCTGCCCGGTCTTACACAGTGTCACTCTGCCCCTTTTTTATTTGGTTATGCTTTCCTCACACATGAAAAAATCTTTACGAGGGTATCTAGAACTTTCCGAAACAATCTTGGTGAAAAAATGTTAAGAGAAAATGTTAGAAGCTTTATTTGGGGTTGTAATGGCCATGAAAGGCAAGTACTCTTCTCATTAATGGGGGGGGGAACTTCTGTGAGCCAAGAGGGGATGTTGTTGCCGCTTATCCTCACTCTTAGGAATGTGGCTTTGGGTGTCTATTAAGGTGTGCCAGCTTTCTTTCCAGAAAAATTCCTCGTGGTACAATATGTTGACTAGGAAGGACAAAAGGTGAACTTCTAGGAGCCTGGACAATTGTGGCAATACGGGGTTACATGTTGGGTTGACCATTAGTTCCTCGAGCTCATTTTTCTATGGCTTGTGATAAATCTTATCTTAACTGGTAGGTATTTTCTTGGCTCGTATATATATCTTGTTGCTTAATGGCTAACAAGGTCCTAGTTCAACTCCTTTCTGGGACGAAGGGAAAAGGCTTGTGGAAGACTACTTATTTTTTCATCTAATGGAATATCTGATTTGAAAGGAAGAATAAAATTTTTAGAGATGTGGATAAGGTATGGGAAAAGGTCTGTTTGTAGCCTGGTCCAAATGGATTCTGCTGGTTTTGCCTTTTCTTTTCTTTTTTTTATGTACATTTTAGAAGTTCAATAAGATTTCATGTTGCTCCTTTTTTGTATGCAATTTTCCCTTCTGAAAAGATTTTTGTCCCTTATATTAAAAATAAAAAGATATAATATCCCATTCTGACACCTTTTACCGGCAATAATTGCCTCTTTGTATCAATTTGGATGAACTTGGTTGTAAGTGGCAGAGATGGTGCATGAGCGTAATGGATTTTACCTCTCTTTCAGGGCTTCGAGTGATCGTGTGAAAGCAAAAGGGACTGTTTACTTGTCAAATGTACGCATGGTGTTTGTGTCAAGTAAACCAGATCCATACTTCACTGCATTTGACATGCCTTTGGTAAGCTTTCACTCTTTATGTTTACTTGCCTTCTTGATGCCTTTTGTCCTTATAATTGTCCATCTTTGGAAACTGAATTGGTGAGAATTCTCCTGCATAAACGAAAGATAGAACTACATTGCAATATCAAAGGAATTACCATATCCATAGGTTTTAAGAAGGTTGTCTCTCCGACAATCCACCCACTATGGACTGGCGCACCAAAATATGACCTCCCCTCCACAAATCCTAGCTCATATTTATAACCAAGTCATCTCTATCTAATTATCACTATATCCTTTATAATATCTCACTAATATTCCCAATATATCTTCTAATAGTACTATTTACACAATCTTCATGAAAATGCCCTAATAAAATCTAATAATTTGTCGAGTTTGCAACTTATTCATAATCCTAGTATGGGCCTCTTATATTTGTGTGTCCATATTTTTAGACCTAAATAGCTGTTGGATTGTGTTATTCTATTCGACATTTTGTTGCATTGCTATCTAATATTTTACTTGTTGCGCTTGCAGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTTGAACCTGTAAGCATGCGAACTATTAGATCACATCTTGTTTAGTGTGTCCGTGTGCTACTTTAGAAAGCCTAGCTAATAGCTTATTACAGGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCATTTAAGATTTTGTTCAAGGAAGGAGGATGTGGTACCTTTGTACCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCTCAAGTTGATCCATTGCAGGCAGCACAAACTCCTGTCGATGAAATGATGAGACATGCGTGAGTAGCGTTGATTCTCATCGAATTCAATCCCATTGTCAAGTTGGAATTTGTCATTTGATTATGTTTTTGATGTTTAACTTGCAGCTATGTGGATCCAAATGACCCGACGAGGATCTTCTTACAACAGCCAACAGCGGAGTCCCAGTTAAGGAGGCGCACATACCAATCCCAACCAGCCGAAAATGCAATGTGAAGTTAGTGGAATTTCGATCTCGTACTATAGATTTGTTCGTTGGTTGGCACTTTGTTGTTACTTGTACAGTTGAAGAATGTGTTGAATTTAAAGTTACATGAGGTAGACTCATTTGTCATTTACAAAAGCTTCGACTCAACTCTTCCAATACGTTATATAGCCCTGTTGGTGCATGATGGCATCGGTTCTGTGATATATGGCTTTTGACTGCTATTGGTCTTTGTGCTTTTGAAGTATGCCATTAATTTGTGGCTCCTTTCTTTGTAGCTGATTGGATTGTCATAAGTTGGTTTGATGACGATCTTCCCAATTGATTAGTACTAAAGATGAAGACAAAACACTATAAGTACGAGAGATATTTTTAGACAAGCACGAGAGAAATTTAAAAAATAAATGTGCGATACTAAAATGATTTTTTTTGGAAAAAAAATATCCGATAAGGCCTTGCAAATTCCCTATTCCTTTGGAATTTTTTCCTTGATAGATGACGATCCATAGGCAACAACTAGGGGTAGGGGCTTCGTGCTTCATCTACTTTGCTCTACATCGTCCTTACGACCCTATGAACTCTTGATACAATGTCGACCAAGAAAACTCCATGCTACAT

mRNA sequence

ATTTCTCGAATGTTCTTCCTGTGCACCAAAGAATTATCCAGAAGGTCGTGGATGTTGGCGGCGATTAGAGTTTTAAACCTCGCGTCTTCCTAACCTGGCTCACTTCTGATCTCCCATGGCTCTCAACCCTAATCTGTTTCCAAATGGCATGCCCGTTCCCTTCACCAACGAGCTTTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGGTTGATAAGATCCCCGGGGCTTCGAGTGATCGTGTGAAAGCAAAAGGGACTGTTTACTTGTCAAATGTACGCATGGTGTTTGTGTCAAGTAAACCAGATCCATACTTCACTGCATTTGACATGCCTTTGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTTGAACCTGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCATTTAAGATTTTGTTCAAGGAAGGAGGATGTGGTACCTTTGTACCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCTCAAGTTGATCCATTGCAGGCAGCACAAACTCCTGTCGATGAAATGATGAGACATGCCTATGTGGATCCAAATGACCCGACGAGGATCTTCTTACAACAGCCAACAGCGGAGTCCCAGTTAAGGAGGCGCACATACCAATCCCAACCAGCCGAAAATGCAATGTGAAGTTAGTGGAATTTCGATCTCGTACTATAGATTTGTTCGTTGGTTGGCACTTTGTTGTTACTTGTACAGTTGAAGAATGTGTTGAATTTAAAGTTACATGAGGTAGACTCATTTGTCATTTACAAAAGCTTCGACTCAACTCTTCCAATACGTTATATAGCCCTGTTGGTGCATGATGGCATCGGTTCTGTGATATATGGCTTTTGACTGCTATTGGTCTTTGTGCTTTTGAAGTATGCCATTAATTTGTGGCTCCTTTCTTTGTAGCTGATTGGATTGTCATAAGTTGGTTTGATGACGATCTTCCCAATTGATTAGTACTAAAGATGAAGACAAAACACTATAAGTACGAGAGATATTTTTAGACAAGCACGAGAGAAATTTAAAAAATAAATGTGCGATACTAAAATGATTTTTTTTGGAAAAAAAATATCCGATAAGGCCTTGCAAATTCCCTATTCCTTTGGAATTTTTTCCTTGATAGATGACGATCCATAGGCAACAACTAGGGGTAGGGGCTTCGTGCTTCATCTACTTTGCTCTACATCGTCCTTACGACCCTATGAACTCTTGATACAATGTCGACCAAGAAAACTCCATGCTACAT

Coding sequence (CDS)

ATGGCTCTCAACCCTAATCTGTTTCCAAATGGCATGCCCGTTCCCTTCACCAACGAGCTTTTCGTATTGGCTAGAGATGGCGTTGAATTTGAGGTTGATAAGATCCCCGGGGCTTCGAGTGATCGTGTGAAAGCAAAAGGGACTGTTTACTTGTCAAATGTACGCATGGTGTTTGTGTCAAGTAAACCAGATCCATACTTCACTGCATTTGACATGCCTTTGCTCTATGTTCATGATGAGAAATTTAACCAGCCAATATTTTTCTGCAACAATATCTCTGGATTAGTTGAACCTGTGGTGCCTGAAGACCAGCACAGGGCTCTCTACTCGACTCACTCATTTAAGATTTTGTTCAAGGAAGGAGGATGTGGTACCTTTGTACCACTCTTCTTCAACTTGCTGTCTTCAGTGAGGCAATACAATCAACATATGAATGCAGGTCCTCAAGTTGATCCATTGCAGGCAGCACAAACTCCTGTCGATGAAATGATGAGACATGCCTATGTGGATCCAAATGACCCGACGAGGATCTTCTTACAACAGCCAACAGCGGAGTCCCAGTTAAGGAGGCGCACATACCAATCCCAACCAGCCGAAAATGCAATGTGA

Protein sequence

MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVSSKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKEGGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQQPTAESQLRRRTYQSQPAENAM

Homology

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BLAST of Carg11282 vs. NCBI nr
Match: KAG7018140.1 (SPAC29B12.11c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS
Sbjct: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPTAESQLRRRTYQSQPAENAM
Sbjct: 181 QPTAESQLRRRTYQSQPAENAM 202

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BLAST of Carg11282 vs. NCBI nr
Match: KAG6581646.1 (hypothetical protein SDJN03_21648, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.4 bits (1069), Expect = 1.4e-112
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLF NGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS
Sbjct: 1   MALNPNLFSNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPTAESQLRRRTYQSQPAENAM
Sbjct: 181 QPTAESQLRRRTYQSQPAENAM 202

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BLAST of Carg11282 vs. NCBI nr
Match: XP_022983649.1 (uncharacterized protein LOC111482201 [Cucurbita maxima] >XP_023526417.1 uncharacterized protein LOC111789925 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.8 bits (1065), Expect = 4.1e-112
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLF NGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFSNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           +KPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  NKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPTAESQLRRRTYQSQPAENAM
Sbjct: 181 QPTAESQLRRRTYQSQPAENAM 202

[Close]

BLAST of Carg11282 vs. NCBI nr
Match: XP_022934071.1 (uncharacterized protein LOC111441354 [Cucurbita moschata])

HSP 1 Score: 414.1 bits (1063), Expect = 7.0e-112
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLF NGMPVPFT+ELFVLARDGVEFEVDKIPGASSDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFSNGMPVPFTHELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPTAESQLRRRTYQSQPAENAM
Sbjct: 181 QPTAESQLRRRTYQSQPAENAM 202

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BLAST of Carg11282 vs. NCBI nr
Match: XP_038903065.1 (uncharacterized protein LOC120089752 [Benincasa hispida])

HSP 1 Score: 408.7 bits (1049), Expect = 3.0e-110
Identity = 194/202 (96.04%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLFPNGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           +KPDP FTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  NKPDPIFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPT ESQLRRRTYQSQP ENAM
Sbjct: 181 QPTTESQLRRRTYQSQPVENAM 202

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BLAST of Carg11282 vs. ExPASy Swiss-Prot
Match: P97765 (WW domain-binding protein 2 OS=Mus musculus OX=10090 GN=Wbp2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.2e-06
Identity = 39/129 (30.23%), Postives = 61/129 (47.29%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEF---EVDKIPGASSDRVKAKGTVYLSNVRMV 60
           MALN N    G  +    E  +++ D VE    ++  +P A   +   KGTVYL+  R++
Sbjct: 1   MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAF--KGTKKGTVYLTPYRVI 60

Query: 61  FVSSKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKIL 120
           F+S   D    +F MP   + D +  QP+F  N I G+V+     +       + S+K+ 
Sbjct: 61  FLSKGKDA-MQSFMMPFYLMKDCEIKQPVFGANFIKGIVK----AEAGGGWEGSASYKLT 120

Query: 121 FKEGGCGTF 127
           F  GG   F
Sbjct: 121 FTAGGAIEF 122

[Close]

BLAST of Carg11282 vs. ExPASy Swiss-Prot
Match: Q969T9 (WW domain-binding protein 2 OS=Homo sapiens OX=9606 GN=WBP2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.4e-06
Identity = 39/129 (30.23%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEF---EVDKIPGASSDRVKAKGTVYLSNVRMV 60
           MALN N    G  +    E  +++ D VE    ++  +P A   +   KGTVYL+  R++
Sbjct: 1   MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAF--KGTKKGTVYLTPYRVI 60

Query: 61  FVSSKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKIL 120
           F+S   D    +F MP   + D +  QP+F  N I G V+     +       + S+K+ 
Sbjct: 61  FLSKGKDA-MQSFMMPFYLMKDCEIKQPVFGANYIKGTVK----AEAGGGWEGSASYKLT 120

Query: 121 FKEGGCGTF 127
           F  GG   F
Sbjct: 121 FTAGGAIEF 122

[Close]

BLAST of Carg11282 vs. ExPASy Swiss-Prot
Match: Q8R478 (WW domain-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Wbp2 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 39/129 (30.23%), Postives = 60/129 (46.51%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEF---EVDKIPGASSDRVKAKGTVYLSNVRMV 60
           MALN N    G  +    E  +++ D VE    ++  +P A   +   KGTVYL+  R++
Sbjct: 1   MALNKNHSEGGGVIVNNTESILMSYDHVELTFNDMKNVPEAF--KGTKKGTVYLTPYRVI 60

Query: 61  FVSSKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKIL 120
           F+S   D    +F MP   + D +  QP+F  N I G V+     +       + S+K+ 
Sbjct: 61  FLSKGKDA-MRSFMMPFYLMKDCEVKQPVFGANFIKGTVK----AEAGGGWEGSASYKLT 120

Query: 121 FKEGGCGTF 127
           F  GG   F
Sbjct: 121 FTAGGAIEF 122

[Close]

BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A6J1J814 (uncharacterized protein LOC111482201 OS=Cucurbita maxima OX=3661 GN=LOC111482201 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.0e-112
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLF NGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFSNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           +KPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  NKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPTAESQLRRRTYQSQPAENAM
Sbjct: 181 QPTAESQLRRRTYQSQPAENAM 202

[Close]

BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A6J1F0U4 (uncharacterized protein LOC111441354 OS=Cucurbita moschata OX=3662 GN=LOC111441354 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.4e-112
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLF NGMPVPFT+ELFVLARDGVEFEVDKIPGASSDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFSNGMPVPFTHELFVLARDGVEFEVDKIPGASSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPTAESQLRRRTYQSQPAENAM
Sbjct: 181 QPTAESQLRRRTYQSQPAENAM 202

[Close]

BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A5A7T2S6 (UPF0664 stress-induced protein C29B12.11c OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1593G00010 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.3e-110
Identity = 193/202 (95.54%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLFPNGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           +KPDP FTAFDMPLLYV DEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  NKPDPVFTAFDMPLLYVRDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDPLQAAQTPVDEMMRHAYVDPNDPT+IFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPT ESQLRRRTYQSQPAENAM
Sbjct: 181 QPTTESQLRRRTYQSQPAENAM 202

[Close]

BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A1S3CPS8 (uncharacterized protein LOC103502837 OS=Cucumis melo OX=3656 GN=LOC103502837 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.3e-110
Identity = 193/202 (95.54%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLFPNGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           +KPDP FTAFDMPLLYV DEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  NKPDPVFTAFDMPLLYVRDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDPLQAAQTPVDEMMRHAYVDPNDPT+IFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QPT ESQLRRRTYQSQPAENAM
Sbjct: 181 QPTTESQLRRRTYQSQPAENAM 202

[Close]

BLAST of Carg11282 vs. ExPASy TrEMBL
Match: A0A0A0LI97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845430 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.5e-109
Identity = 192/202 (95.05%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNPNLFPNGMPVPFTNELFVLARDGVEFE+DKIPGA+SDRVKAKGT+YLSNVRMVFVS
Sbjct: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEIDKIPGANSDRVKAKGTIYLSNVRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           +KPDP FTAFDMPLLYV DEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE
Sbjct: 61  NKPDPVFTAFDMPLLYVRDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPQVDPLQAAQTPVDEMMRHAYVDPNDPTRIFLQ 180
           GGCGTFVPLFFNLLSSVRQYNQHMNAGP+VDPLQAAQTPVDEMMRHAYVDPNDPT+IFLQ
Sbjct: 121 GGCGTFVPLFFNLLSSVRQYNQHMNAGPRVDPLQAAQTPVDEMMRHAYVDPNDPTKIFLQ 180

Query: 181 QPTAESQLRRRTYQSQPAENAM 203
           QP  ESQLRRRTYQSQPAENAM
Sbjct: 181 QPATESQLRRRTYQSQPAENAM 202

[Close]

BLAST of Carg11282 vs. TAIR 10
Match: AT5G11680.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: WW-domain-binding protein (InterPro:IPR018826); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 333.2 bits (853), Expect = 1.5e-91
Identity = 161/207 (77.78%), Postives = 173/207 (83.57%), Query Frame = 0


Query: 1   MALNPNLFPNGMPVPFTNELFVLARDGVEFEVDKIPGASSDRVKAKGTVYLSNVRMVFVS 60
           MALNP L PNGMPVPF NE+FVL RDGVEFEVDKIPG     VKAKG +YLSN+RMVFVS
Sbjct: 1   MALNPQLLPNGMPVPFVNEMFVLVRDGVEFEVDKIPGGHGGHVKAKGVIYLSNIRMVFVS 60

Query: 61  SKPDPYFTAFDMPLLYVHDEKFNQPIFFCNNISGLVEPVVPEDQHRALYSTHSFKILFKE 120
           SKP   F AFDMPLLY+H EKFNQPIF CNNI+G VEPVVPE++HRALYSTHSFKILFKE
Sbjct: 61  SKPVDNFVAFDMPLLYIHAEKFNQPIFHCNNIAGQVEPVVPENEHRALYSTHSFKILFKE 120

Query: 121 GGCGTFVPLFFNLLSSVRQYNQHMN-------AGPQVDPLQAAQTPVDEMMRHAYVDPND 180
           GGCGTFVPLF NL+SSVRQYN+ M        A P VDPLQAAQTPVDEMMRHAYVDPND
Sbjct: 121 GGCGTFVPLFLNLISSVRQYNRQMQQAAEAAAAAPHVDPLQAAQTPVDEMMRHAYVDPND 180

Query: 181 PTRIFLQQPTAESQLRRRTYQSQPAEN 201
           PTRI+LQQP+ ESQLRRR Y S  AE+
Sbjct: 181 PTRIYLQQPSGESQLRRRAYHSGAAEH 207

The following BLAST results are available for this feature:

BLAST of Carg11282 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018140.1	1.7e-113	100.00	SPAC29B12.11c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6581646.1	1.4e-112	99.50	hypothetical protein SDJN03_21648, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022983649.1	4.1e-112	98.51	uncharacterized protein LOC111482201 [Cucurbita maxima] >XP_023526417.1 uncharac...	[more]
XP_022934071.1	7.0e-112	98.51	uncharacterized protein LOC111441354 [Cucurbita moschata]	[more]
XP_038903065.1	3.0e-110	96.04	uncharacterized protein LOC120089752 [Benincasa hispida]	[more]

BLAST of Carg11282 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P97765	3.2e-06	30.23	WW domain-binding protein 2 OS=Mus musculus OX=10090 GN=Wbp2 PE=1 SV=1	[more]
Q969T9	5.4e-06	30.23	WW domain-binding protein 2 OS=Homo sapiens OX=9606 GN=WBP2 PE=1 SV=1	[more]
Q8R478	9.2e-06	30.23	WW domain-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Wbp2 PE=1 SV=1	[more]

BLAST of Carg11282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J814	2.0e-112	98.51	uncharacterized protein LOC111482201 OS=Cucurbita maxima OX=3661 GN=LOC111482201...	[more]
A0A6J1F0U4	3.4e-112	98.51	uncharacterized protein LOC111441354 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A5A7T2S6	9.3e-110	95.54	UPF0664 stress-induced protein C29B12.11c OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CPS8	9.3e-110	95.54	uncharacterized protein LOC103502837 OS=Cucumis melo OX=3656 GN=LOC103502837 PE=...	[more]
A0A0A0LI97	3.5e-109	95.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G845430 PE=4 SV=1	[more]

BLAST of Carg11282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11680.1	1.5e-91	77.78	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31606:SF11	WW DOMAIN-BINDING PROTEIN 2-LIKE	coord: 1..198
None	No IPR available	CDD	cd13214	PH-GRAM_WBP2	coord: 29..135 e-value: 4.29652E-43 score: 138.076
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 1..130
IPR044852	WW domain-binding protein 2-like	PANTHER	PTHR31606	WW DOMAIN BINDING PROTEIN 2, ISOFORM E	coord: 1..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11282-RA	Carg11282-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0031490	chromatin DNA binding
molecular_function	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity
molecular_function	GO:0003713	transcription coactivator activity