Carg10283 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTACACAGCTGAGTTTTGCTTCTTCTGGCTCAATTCCAAGCTTGTTGAAACTGGTGCTTGTGAGCCACCTTCATAGTATCACGAATATAAATTCAGCTCGATACCTGTATATACATGCCATCAAAATAGTCTCTATGTCGCTTATACAGGAGGCATACCTTTTGTCAAGGATGATCTATTATTTTACAAGTAAGATTTATCATCAAGCAATGATTTAATACATTGCGAGTTCTCCTTCTCCTTTTAAATGAGGTTTTAATTTTATTTTCTTTCATGTATAATTTTTCATTTAGTTGATAACCTCTGTTATCTGGTATTGGAATATTTTGAAACCTGTGGAACACTCCTTATGTACATGTAGGATTACATATTTAACAATTTTCAAGTTATAATGTTATGATGCTTATGCTTGATAATTGCTATGCTCTGTTCTTCTTGTTAAGTTATTTCTTTCATTTTATGAATCTGTTTCTGTGCTTACAAGGTATAACTTCATCCATCACGTATTAAGAAGTTGTCTTTGTTCTAGGCATTCCCATTACCAGCCAGGTACCCCACTTGCATTGGTCTGGAAGGATGAGAATTGCAGTCGATATGTTATTGACACAGATAAAATGGACAAGTTCCAAGCCAACAGCAGGTACTTTATCTCTGCATTTCTTGTTATTAAAAAAAAACTATATGAATGTCTGCAATTATTTTCTTCCTTTCTTTTTCTTTTTTATAAATAATGTTGCCACTATCTTAGTTTCTAGTCAATTGCAGTGGTCAATGATCCATTTTTGTGATACGACATGGATCTGTTCTCTCTCTCTATCTCTCTCGTGCAGTTTATAATGCCAATACTGCCTTATTTGAATGATCAGCTGGTTTTGGAGCTACAAGGTGATGGAAAGGGTGCTACATTAGATGATCCTTCTGTGGACATTGGTTGCTTAGATGGTGACTTGATCGAAAAGGTTTTGTTGATCCAAATTTAACCCTTTCTATGGTTCATTAGTTTTAAAATTCTTTTGTTTATTACATGTTGCTTCCTTCGACTACATTTTTGCTTGCAATGAGGTCTGTGGTTATTATGTCTTCTTTCTGTCCTTGTTGGTTTGTTGTGTAATTTGGCATGGTACCTATGTCACCATATCTTAGTTTTAATGTTGTTATTGGGGATTGTGTTAGCTGAAGAAACTGTTGCTTGATATTGGCATCTCTCTCTCTCTCTCTCTCTCTCTCTTTGCATCTCATATTTTGGTCTCCCTTTCTGTTACATACATCCCTTCTCAATGACTTCATTTCTTTTCACTTATTTGGCTCCCCTGCTATGATATCCCTTGGTCACTCTACTCTCTTTTTATTCTTTGGTTTAGATTCTTACGGATGTTTGTAGTGGTTGTGGTCCTCAGAGTCAGGCTTATCATTCTATGTTGAAGACATTTTGCGTCCTCTTCTTTGACTAGACTTTTATGGTTAACGTGTTTATTTGGTATCTCATGAGACATACTGTTGGGAAGGATCAAGAGGGTGTAGACGATTATGGGAGGGGTTCTGGGAGGAGATTTTTGTTTAACTCACTTCAATAGCCCATTTTTGTCAATGCCACGAGTTTCATGCATGCAGGTTTTCTGTTGTTATTTGTTACCAACATTTGAGGTTTCTTCTTTGTCAGCAAGTAAATACCAGAATTGCTTGAATTTTCAGTTAGGGTTTGTCTTCAGGTAATCTATTTCGATTTATCATTGTTGATGGTGGGTTGACCATTGTGGATGGGAGGATTCAGAGGGTAGATTTACATTACACTGGCAAGGTCAATCGAGCTCGAGGATAGTTACTCCAAGGTTTGTGCTAAATATCATACTTGTAGGGTCAAATCATATTCA ATGATTACACAGCTGAGTTTTGCTTCTTCTGGCTCAATTCCAAGCTTGTTGAAACTGGTGCTTGTGAGCCACCTTCATAGTATCACGAATATAAATTCAGCTCGATACCTGTATATACATGCCATCAAAATAGTCTCTATGTCGCTTATACAGGAGGCATACCTTTTGTCAAGGATGATCTATTATTTTACAAGCATTCCCATTACCAGCCAGGTACCCCACTTGCATTGGTCTGGAAGGATGAGAATTGCAGTCGATATGTTATTGACACAGATAAAATGGACAAGTTCCAAGCCAACAGCAGGTGATGGAAAGGGTGCTACATTAGATGATCCTTCTGTGGACATTGGTTGCTTAGATGGTAATCTATTTCGATTTATCATTGTTGATGGTGGGTTGACCATTGTGGATGGGAGGATTCAGAGGGTAGATTTACATTACACTGGCAAGGTCAATCGAGCTCGAGGATAGTTACTCCAAGGTTTGTGCTAAATATCATACTTGTAGGGTCAAATCATATTCA ATGATTACACAGCTGAGTTTTGCTTCTTCTGGCTCAATTCCAAGCTTGTTGAAACTGGTGCTTGTGAGCCACCTTCATAGTATCACGAATATAAATTCAGCTCGATACCTGTATATACATGCCATCAAAATAGTCTCTATGTCGCTTATACAGGAGGCATACCTTTTGTCAAGGATGATCTATTATTTTACAAGCATTCCCATTACCAGCCAGGTACCCCACTTGCATTGGTCTGGAAGGATGAGAATTGCAGTCGATATGTTATTGACACAGATAAAATGGACAAGTTCCAAGCCAACAGCAGGTGATGGAAAGGGTGCTACATTAGATGATCCTTCTGTGGACATTGGTTGCTTAGATGGTAATCTATTTCGATTTATCATTGTTGATGGTGGGTTGACCATTGTGGATGGGAGGATTCAGAGGGTAGATTTACATTACACTGGCAAGGTCAATCGAGCTCGAGGATAG MITQLSFASSGSIPSLLKLVLVSHLHSITNINSARYLYIHAIKIVSMSLIQEAYLLSRMIYYFTSIPITSQVPHLHWSGRMRIAVDMLLTQIKWTSSKPTAGDGKGATLDDPSVDIGCLDGNLFRFIIVDGGLTIVDGRIQRVDLHYTGKVNRARG Homology
BLAST of Carg10283 vs. NCBI nr
Match: KAG7023065.1 (hypothetical protein SDJN02_14089, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 305.1 bits (780), Expect = 3.6e-79 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Carg10283 vs. NCBI nr
Match: KAG6589387.1 (hypothetical protein SDJN03_14810, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219.9 bits (559), Expect = 1.5e-53 Identity = 118/141 (83.69%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of Carg10283 vs. NCBI nr
Match: XP_022921813.1 (uncharacterized protein LOC111429956 [Cucurbita moschata]) HSP 1 Score: 182.2 bits (461), Expect = 3.5e-42 Identity = 98/105 (93.33%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of Carg10283 vs. NCBI nr
Match: XP_038879771.1 (snurportin-1 [Benincasa hispida]) HSP 1 Score: 80.5 bits (197), Expect = 1.4e-11 Identity = 43/65 (66.15%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Carg10283 vs. NCBI nr
Match: XP_022135463.1 (snurportin-1 [Momordica charantia]) HSP 1 Score: 80.1 bits (196), Expect = 1.9e-11 Identity = 42/65 (64.62%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Carg10283 vs. ExPASy TrEMBL
Match: A0A6J1E4W0 (uncharacterized protein LOC111429956 OS=Cucurbita moschata OX=3662 GN=LOC111429956 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42 Identity = 98/105 (93.33%), Postives = 99/105 (94.29%), Query Frame = 0
BLAST of Carg10283 vs. ExPASy TrEMBL
Match: A0A6J1C4W1 (Snurportin-1 OS=Momordica charantia OX=3673 GN=LOC111007415 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 9.0e-12 Identity = 42/65 (64.62%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Carg10283 vs. ExPASy TrEMBL
Match: A0A0A0LNL4 (Snurportin-1 OS=Cucumis sativus OX=3659 GN=Csa_1G002050 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 2.9e-10 Identity = 41/64 (64.06%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Carg10283 vs. ExPASy TrEMBL
Match: A0A6J1KQC3 (Snurportin-1 OS=Cucurbita maxima OX=3661 GN=LOC111495530 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 6.5e-10 Identity = 40/64 (62.50%), Postives = 40/64 (62.50%), Query Frame = 0
BLAST of Carg10283 vs. ExPASy TrEMBL
Match: A0A5A7URL4 (Snurportin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00570 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 8.4e-10 Identity = 40/64 (62.50%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of Carg10283 vs. TAIR 10
Match: AT4G24880.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 6.0e-08 Identity = 30/64 (46.88%), Postives = 35/64 (54.69%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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