Carg09795 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCATAATTTGGCTGCTGTTTCATTCCACTTTCCACAGCTTATTATAAACCGGAAATGCCATCAGCAAAGGCATTGTTTTAGAAGCTTTGCAGTGAAGAACAACAACAATAATCATCAAAACCCACCAATTTTCTCTCTTAGATTCTCCACTTTTCATCCACTTTTTGAGTCTCCTAATGTAACCAAACAAAACCCTTTCTTTAATTTTCCATCCTTTTGTTCTTCAAATCGTGTTTATCGTCGCAGGCTTCGTTTGATGAATACATTGGAGACGAAGATCGATTGTTGAGAGCTACTTTTTCGGGAAAAAGTGAAAAATTAAACAAGGTTTTTATTTTTTTATTTTTATCGTTGTTGTCGTTGTTTGAATCTCTTCGTGTTTGTAATAATGATATGATATTGTTTGTTTCAATGAAGGGTGAATGGAGAGTCGAAATGCCTTCTTTTCAATTGCTATTCCTCAAGCTTAGCCCTGTCGTTGACGTGAGACTAAGTTGCAAAAGCTCTACCAAAGATTACCCTATTCATATTCCTCGTCATGTCTCTAAATTTCTTGACCTTCAAATGGTATGCAATAATATTAAAATGACAAATATAACAGTTATGGTAGGCAATAATATAAGACAGATATCTAAATATTAACATTTAAATGAAAAATGATTAGATGAGATGGGAGGTGAGGGGAATGGGCAAAGATTTCAAGCCGCAAATGTTCAGAATCAGTGTAAAAGGAGCTATGTATGCGATTAGAACAGAATCAGAATCAAAAAGTATACTGAGAAATCATTTGATTCTCGATCTTCACAGCTTTGATTCGCCGATACCCACTGATTTTCTTCAACCATTTGCAGAAAAGGTACTCACTCGATCCATTAACGCTCATAATTTTCATAAAAGTTAGCTAATTTGTTCGTTATTCGTAGGGATTGGAGGGAATGATGAAGGAAAGTATGAGAGATTTTACACAAAATTTGGTTTTGGATTACACCAAATACAAGAAGGAGAAGCAAAACAAGAATCCCTAATATCTCTTACATTTTTTTTTTTATACCATAATGTTATTATTTATTTTATTTTAGATTTTAATTATTAATGTAATTTAGATATTATTTTCCATAAATAATTAAATGGAAATTATTTTGGTGTTGTATTAAAAGTCAAAGGCTTTATATGAGAGCGTTGACAAATTGGAAACCCCGATCTGTACGCGTAACCAACCAGCTGTCCTATCCTAAAAGGACGAAACGACACCGTATAGTCACGGATAATCCAAATTCCATTTCAGTACTTAAATTCCCAATTTGAGGTCGTTTTTCCTCTCGCAATAGATTCATCCAAAGCAGTTCGTTCCAGATCGACGAGATTTCACGATGCCGTACTACACGAGGGACGATGAGGCGGTGGATGACTTCGACGAGTACGATCCGACGCCTTACGGCGGAGGATTTGACCTATTTCTGACATATGGCCGTCCAATTTCGCCCTGCGAAGATACCTGCTACCCGCACTCTGCTGGCAACGATGACGAGTTTGATTACGAGCGTCCCCAGTTTGAATCCAATGCCCAGCCCTCAGCTTATGGCGACGACGCCCTCCAGGCTGAGTACAGCAGCTACTCCCGCCCTAAGCCTCATTCTTATTGTGCTCCGCCTCGTCCTGTGGAACAAGAATACGGATCTGGTGGCTATGAGTCTGCTAGGCCCCAGCCGGCTTATGGGTACCAGCAAAGTGGATCCGAGTACGGATCTGAAGGATATGGTCGGAAATCGGAGTCCGAGCAACAGGAGTACGGATCTGGTGGGTATAGGCGGAAACAGGAATCGGAGTCTTACGGATCTGAAGAATACGGATCTGGTGGGTATGGGCGGAAACAGGAATCGGAATCTTACGGATCTGGTGGGTATGGGCGGAAACAGGAATCGGAATCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCCGATTCTTACGGATCTGGTGGTGGGTATGGGCGGAAACAGGAATCGGATTCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCGGACTCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCGGATTCTTACGGATCTGGTGGTGGTTATGGGCGGAAACAGGAATCGGATTCTTATGGATCTGGTGGGTATGGGCGGAGACAGGAATCGGAGTCTTACGGATCTGGTGGTGGGTATGGGCGGAGAGAGGAGGGGGAATCGGAGTCCTACGGGTCTGGTGGGTACCGGCGGCAGTCGGAGTCTGAAGAGTACGGATCCGGGCGAAAACAGAGTTATGGGGAAGAAGAGGGGAGTGGGGGGTATGGGAAGCAGGAGTATGAGAGTTCTGGGTATAGAAGGGAGAAGTATGAGAGGCCAAATTATGGGGATGAGGAGCGGATGAGGCCGAGCTATGGGCGGTCGGAGGAGGAGGATTACAGGAAGCCAAGCTACGCGGAGGACGAGGAGCGTGAGTATGCGTATGGGGAAGAGGGATATGGGCGCAAGAAATACGTAAGCTAAGCTCACTTCACTACTCCATTCAAAATGAAAATGATTTGTTTAGTGGTATTAATTTTGTGGGTTTTTGTGATTGCAGGGTGGTGATTCTGACGAGGACAGCCGCCGCCACCATCACCACCGCAGGAACTACGAGGATGAGTGAGTGAGTGAGTGAGTGAGTGAGTGATGGCCGATGGGCGTTCTCAAATTGGCACTAAATAAAAGGTTGGGATGCCCACATTGGCTGCTTCTCCGCTCATCCAACTGTGATGTGTTATGCTTTGTTTGCATGATCAACTGTTGAATGCTTTGTGTGTGTGTGTTTTTTGTTTGCTTGTTTGATGGTTTTGGGACATAACAATATCCATCTACTTCTACACTTCAATCAAGTTTATGATGAAGCTTTGATCAATTTTTCTGTTCTTGCTCTTATTGGGACCCCTTTATCTATCCCCTATTAAAATAAGGTTGCCTTCAATTTTTGTCTCACTTCTTCACTAATGACTCACCTTCCTCTTCTACATTGGATTTGCTACTCATTAAGGAACATCTATAATCCTATCATCCTAGTAATTATTCCGAAATTTTTATTAAAAGAAATGGCGTTGATCTATAGGTGATGAGATAAATAACATGTAAGATTGACTTGTGTTTCTATCTTCAAAAGAACAAATTTATAAACAGATCTATAATGAACAGATCTATAATGAATAAATC ATGGCTCATAATTTGGCTGCTGTTTCATTCCACTTTCCACAGCTTATTATAAACCGGAAATGCCATCAGCAAAGGCATTGTTTTAGAAGCTTTGCAGTGAAGAACAACAACAATAATCATCAAAACCCACCAATTTTCTCTCTTAGATTCTCCACTTTTCATCCACTTTTTGAGTCTCCTAATGCTTCGTTTGATGAATACATTGGAGACGAAGATCGATTGTTGAGAGCTACTTTTTCGGGAAAAAGTGAAAAATTAAACAAGGGTGAATGGAGAGTCGAAATGCCTTCTTTTCAATTGCTATTCCTCAAGCTTAGCCCTGTCGTTGACGTGAGACTAAGTTGCAAAAGCTCTACCAAAGATTACCCTATTCATATTCCTCGTCATGTCTCTAAATTTCTTGACCTTCAAATGATGAGATGGGAGGTGAGGGGAATGGGCAAAGATTTCAAGCCGCAAATGTTCAGAATCAGTGTAAAAGGAGCTATGTATGCGATTAGAACAGAATCAGAATCAAAAAGTATACTGAGAAATCATTTGATTCTCGATCTTCACAGCTTTGATTCGCCGATACCCACTGATTTTCTTCAACCATTTGCAGAAAAGATTCATCCAAAGCAGTTCGTTCCAGATCGACGAGATTTCACGATGCCGTACTACACGAGGGACGATGAGGCGGTGGATGACTTCGACGAGTACGATCCGACGCCTTACGGCGGAGGATTTGACCTATTTCTGACATATGGCCGTCCAATTTCGCCCTGCGAAGATACCTGCTACCCGCACTCTGCTGGCAACGATGACGAGTTTGATTACGAGCGTCCCCAGTTTGAATCCAATGCCCAGCCCTCAGCTTATGGCGACGACGCCCTCCAGGCTGAGTACAGCAGCTACTCCCGCCCTAAGCCTCATTCTTATTGTGCTCCGCCTCGTCCTGTGGAACAAGAATACGGATCTGGTGGCTATGAGTCTGCTAGGCCCCAGCCGGCTTATGGGTACCAGCAAAGTGGATCCGAGTACGGATCTGAAGGATATGGTCGGAAATCGGAGTCCGAGCAACAGGAGTACGGATCTGGTGGGTATAGGCGGAAACAGGAATCGGAGTCTTACGGATCTGAAGAATACGGATCTGGTGGGTATGGGCGGAAACAGGAATCGGAATCTTACGGATCTGGTGGGTATGGGCGGAAACAGGAATCGGAATCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCCGATTCTTACGGATCTGGTGGTGGGTATGGGCGGAAACAGGAATCGGATTCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCGGACTCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCGGATTCTTACGGATCTGGTGGTGGTTATGGGCGGAAACAGGAATCGGATTCTTATGGATCTGGTGGGTATGGGCGGAGACAGGAATCGGAGTCTTACGGATCTGGTGGTGGGTATGGGCGGAGAGAGGAGGGGGAATCGGAGTCCTACGGGTCTGGTGGGTACCGGCGGCAGTCGGAGTCTGAAGAGTACGGATCCGGGCGAAAACAGAGTTATGGGGAAGAAGAGGGGAGTGGGGGGTATGGGAAGCAGGAGTATGAGAGTTCTGGGTATAGAAGGGAGAAGTATGAGAGGCCAAATTATGGGGATGAGGAGCGGATGAGGCCGAGCTATGGGCGGTCGGAGGAGGAGGATTACAGGAAGCCAAGCTACGCGGAGGACGAGGAGCGTGAGTATGCGTATGGGGAAGAGGGATATGGGCGCAAGAAATACGGTGGTGATTCTGACGAGGACAGCCGCCGCCACCATCACCACCGCAGGAACTACGAGGATGAGTGAGTGAGTGAGTGAGTGAGTGAGTGATGGCCGATGGGCGTTCTCAAATTGGCACTAAATAAAAGGTTGGGATGCCCACATTGGCTGCTTCTCCGCTCATCCAACTGTGATGTGTTATGCTTTGTTTGCATGATCAACTGTTGAATGCTTTGTGTGTGTGTGTTTTTTGTTTGCTTGTTTGATGGTTTTGGGACATAACAATATCCATCTACTTCTACACTTCAATCAAGTTTATGATGAAGCTTTGATCAATTTTTCTGTTCTTGCTCTTATTGGGACCCCTTTATCTATCCCCTATTAAAATAAGGTTGCCTTCAATTTTTGTCTCACTTCTTCACTAATGACTCACCTTCCTCTTCTACATTGGATTTGCTACTCATTAAGGAACATCTATAATCCTATCATCCTAGTAATTATTCCGAAATTTTTATTAAAAGAAATGGCGTTGATCTATAGGTGATGAGATAAATAACATGTAAGATTGACTTGTGTTTCTATCTTCAAAAGAACAAATTTATAAACAGATCTATAATGAACAGATCTATAATGAATAAATC ATGGCTCATAATTTGGCTGCTGTTTCATTCCACTTTCCACAGCTTATTATAAACCGGAAATGCCATCAGCAAAGGCATTGTTTTAGAAGCTTTGCAGTGAAGAACAACAACAATAATCATCAAAACCCACCAATTTTCTCTCTTAGATTCTCCACTTTTCATCCACTTTTTGAGTCTCCTAATGCTTCGTTTGATGAATACATTGGAGACGAAGATCGATTGTTGAGAGCTACTTTTTCGGGAAAAAGTGAAAAATTAAACAAGGGTGAATGGAGAGTCGAAATGCCTTCTTTTCAATTGCTATTCCTCAAGCTTAGCCCTGTCGTTGACGTGAGACTAAGTTGCAAAAGCTCTACCAAAGATTACCCTATTCATATTCCTCGTCATGTCTCTAAATTTCTTGACCTTCAAATGATGAGATGGGAGGTGAGGGGAATGGGCAAAGATTTCAAGCCGCAAATGTTCAGAATCAGTGTAAAAGGAGCTATGTATGCGATTAGAACAGAATCAGAATCAAAAAGTATACTGAGAAATCATTTGATTCTCGATCTTCACAGCTTTGATTCGCCGATACCCACTGATTTTCTTCAACCATTTGCAGAAAAGATTCATCCAAAGCAGTTCGTTCCAGATCGACGAGATTTCACGATGCCGTACTACACGAGGGACGATGAGGCGGTGGATGACTTCGACGAGTACGATCCGACGCCTTACGGCGGAGGATTTGACCTATTTCTGACATATGGCCGTCCAATTTCGCCCTGCGAAGATACCTGCTACCCGCACTCTGCTGGCAACGATGACGAGTTTGATTACGAGCGTCCCCAGTTTGAATCCAATGCCCAGCCCTCAGCTTATGGCGACGACGCCCTCCAGGCTGAGTACAGCAGCTACTCCCGCCCTAAGCCTCATTCTTATTGTGCTCCGCCTCGTCCTGTGGAACAAGAATACGGATCTGGTGGCTATGAGTCTGCTAGGCCCCAGCCGGCTTATGGGTACCAGCAAAGTGGATCCGAGTACGGATCTGAAGGATATGGTCGGAAATCGGAGTCCGAGCAACAGGAGTACGGATCTGGTGGGTATAGGCGGAAACAGGAATCGGAGTCTTACGGATCTGAAGAATACGGATCTGGTGGGTATGGGCGGAAACAGGAATCGGAATCTTACGGATCTGGTGGGTATGGGCGGAAACAGGAATCGGAATCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCCGATTCTTACGGATCTGGTGGTGGGTATGGGCGGAAACAGGAATCGGATTCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCGGACTCTTACGGGTCTGGTGGTTATGGGGGGAGACAGGAATCGGATTCTTACGGATCTGGTGGTGGTTATGGGCGGAAACAGGAATCGGATTCTTATGGATCTGGTGGGTATGGGCGGAGACAGGAATCGGAGTCTTACGGATCTGGTGGTGGGTATGGGCGGAGAGAGGAGGGGGAATCGGAGTCCTACGGGTCTGGTGGGTACCGGCGGCAGTCGGAGTCTGAAGAGTACGGATCCGGGCGAAAACAGAGTTATGGGGAAGAAGAGGGGAGTGGGGGGTATGGGAAGCAGGAGTATGAGAGTTCTGGGTATAGAAGGGAGAAGTATGAGAGGCCAAATTATGGGGATGAGGAGCGGATGAGGCCGAGCTATGGGCGGTCGGAGGAGGAGGATTACAGGAAGCCAAGCTACGCGGAGGACGAGGAGCGTGAGTATGCGTATGGGGAAGAGGGATATGGGCGCAAGAAATACGGTGGTGATTCTGACGAGGACAGCCGCCGCCACCATCACCACCGCAGGAACTACGAGGATGAGTGA MAHNLAAVSFHFPQLIINRKCHQQRHCFRSFAVKNNNNNHQNPPIFSLRFSTFHPLFESPNASFDEYIGDEDRLLRATFSGKSEKLNKGEWRVEMPSFQLLFLKLSPVVDVRLSCKSSTKDYPIHIPRHVSKFLDLQMMRWEVRGMGKDFKPQMFRISVKGAMYAIRTESESKSILRNHLILDLHSFDSPIPTDFLQPFAEKIHPKQFVPDRRDFTMPYYTRDDEAVDDFDEYDPTPYGGGFDLFLTYGRPISPCEDTCYPHSAGNDDEFDYERPQFESNAQPSAYGDDALQAEYSSYSRPKPHSYCAPPRPVEQEYGSGGYESARPQPAYGYQQSGSEYGSEGYGRKSESEQQEYGSGGYRRKQESESYGSEEYGSGGYGRKQESESYGSGGYGRKQESESYGSGGYGGRQESDSYGSGGGYGRKQESDSYGSGGYGGRQESDSYGSGGYGGRQESDSYGSGGGYGRKQESDSYGSGGYGRRQESESYGSGGGYGRREEGESESYGSGGYRRQSESEEYGSGRKQSYGEEEGSGGYGKQEYESSGYRREKYERPNYGDEERMRPSYGRSEEEDYRKPSYAEDEEREYAYGEEGYGRKKYGGDSDEDSRRHHHHRRNYEDE Homology
BLAST of Carg09795 vs. NCBI nr
Match: KAG7017696.1 (hypothetical protein SDJN02_19562, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00 Identity = 621/621 (100.00%), Postives = 621/621 (100.00%), Query Frame = 0
BLAST of Carg09795 vs. NCBI nr
Match: KAG6580952.1 (hypothetical protein SDJN03_20954, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 1189.9 bits (3077), Expect = 0.0e+00 Identity = 616/621 (99.19%), Postives = 619/621 (99.68%), Query Frame = 0
BLAST of Carg09795 vs. NCBI nr
Match: XP_023521689.1 (uncharacterized protein At5g39570-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521690.1 uncharacterized protein At5g39570-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023528163.1 uncharacterized protein At5g39570-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 715.3 bits (1845), Expect = 4.5e-202 Identity = 387/405 (95.56%), Postives = 390/405 (96.30%), Query Frame = 0
BLAST of Carg09795 vs. NCBI nr
Match: XP_022983800.1 (uncharacterized protein At5g39570 isoform X1 [Cucurbita maxima]) HSP 1 Score: 683.7 bits (1763), Expect = 1.5e-192 Identity = 375/406 (92.36%), Postives = 380/406 (93.60%), Query Frame = 0
BLAST of Carg09795 vs. NCBI nr
Match: XP_022934705.1 (uncharacterized protein At5g39570 isoform X1 [Cucurbita moschata]) HSP 1 Score: 660.2 bits (1702), Expect = 1.7e-185 Identity = 361/405 (89.14%), Postives = 361/405 (89.14%), Query Frame = 0
BLAST of Carg09795 vs. ExPASy Swiss-Prot
Match: Q9FKA5 (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana OX=3702 GN=At5g39570 PE=1 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 8.1e-53 Identity = 204/438 (46.58%), Postives = 242/438 (55.25%), Query Frame = 0
BLAST of Carg09795 vs. ExPASy TrEMBL
Match: A0A6J1J6Y0 (uncharacterized protein At5g39570 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482310 PE=4 SV=1) HSP 1 Score: 683.7 bits (1763), Expect = 7.1e-193 Identity = 375/406 (92.36%), Postives = 380/406 (93.60%), Query Frame = 0
BLAST of Carg09795 vs. ExPASy TrEMBL
Match: A0A6J1F8H6 (uncharacterized protein At5g39570 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441810 PE=4 SV=1) HSP 1 Score: 660.2 bits (1702), Expect = 8.4e-186 Identity = 361/405 (89.14%), Postives = 361/405 (89.14%), Query Frame = 0
BLAST of Carg09795 vs. ExPASy TrEMBL
Match: A0A6J1F2K1 (uncharacterized protein At5g39570 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441810 PE=4 SV=1) HSP 1 Score: 630.9 bits (1626), Expect = 5.5e-177 Identity = 347/405 (85.68%), Postives = 347/405 (85.68%), Query Frame = 0
BLAST of Carg09795 vs. ExPASy TrEMBL
Match: A0A5A7UCY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001680 PE=4 SV=1) HSP 1 Score: 629.8 bits (1623), Expect = 1.2e-176 Identity = 374/575 (65.04%), Postives = 413/575 (71.83%), Query Frame = 0
BLAST of Carg09795 vs. ExPASy TrEMBL
Match: A0A6J1J3E8 (uncharacterized protein At5g39570 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482310 PE=4 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 9.1e-148 Identity = 301/405 (74.32%), Postives = 303/405 (74.81%), Query Frame = 0
BLAST of Carg09795 vs. TAIR 10
Match: AT5G39570.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 209.9 bits (533), Expect = 5.8e-54 Identity = 204/438 (46.58%), Postives = 242/438 (55.25%), Query Frame = 0
BLAST of Carg09795 vs. TAIR 10
Match: AT5G39530.1 (Protein of unknown function (DUF1997) ) HSP 1 Score: 122.1 bits (305), Expect = 1.6e-27 Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 0
BLAST of Carg09795 vs. TAIR 10
Match: AT5G39520.1 (Protein of unknown function (DUF1997) ) HSP 1 Score: 111.7 bits (278), Expect = 2.1e-24 Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 0
BLAST of Carg09795 vs. TAIR 10
Match: AT3G29075.1 (glycine-rich protein ) HSP 1 Score: 104.4 bits (259), Expect = 3.4e-22 Identity = 86/221 (38.91%), Postives = 112/221 (50.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|