Carg08997 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08997
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	calmodulin-like
Location	Carg_Chr02: 9830847 .. 9831972 (+)
RNA-Seq Expression	Carg08997
Synteny	Carg08997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTGAAGCTCTTACTGAAGATCAGATTGCTGATTTCCGGGAAGCCTTCTGTTTAATTGACAAGGATGCGGATGGTGGGTTCATTCTTCTCTCTTCCCCTTTGCTTTTGCTTTTGCTTTAGCTTTTGCCCACTTCCTGTTTGATGTTTTTCCTGAATTAAACATGATGCTGAAACTTACATTTTATTCATTACACTTTTTTGGTTCTGCGAAAGGATATACTTGAGGATGGATGTTCTGTTTTTAATCAGTACTGGGTTGTAATAATCTTAACTTTTACAAGTCAAAATTAGATTTAAAGATTCTTTGTGAGAAAGAAGTAGTTATATTTTTGAGTTTAGAAAGAGTGAAGGCTTAAACTGATTGTTAAAATATGTTCGTGGGGATATTTGCAGGATTCATCACTGTGGAGGAGCTAGCGGCAGTGATTCAGTCATTGGATGGACATCCCACCAAGAATGAAGTTAGAGATATGTTATGCGAAGTGGATGTGGATGCTAATGGGACGATAGATTTTGATGAGTTCCTGAATGTGATGGCAAGGAAAGTGCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAACGCAAAGGGTAGAAATGAATTGTGATAGGGATTTTAGTGTGCATGGAGGCTGAGGAGGAGTTGGGTTTTGCAGGGCAATGTGACGGAGGAGCTAAAAGAGGCCTTCAAAGTGTTTGATAGGGACCAAGATGGTTATATCTCAGCTTTTGAGGTAAGATTTCAATCCATTTGTCTCTGAATACTGAATAGGGTCTGATAAATGCTTTAAAATCTCCATTGATTCATTCATTGTGTGAAATTAATTAGCTTAACGTCTTACCGAGAAAGTGAATGTGCAGCTGAGAAATGTAATGATAAATTTGGGAGAGAGATTGACAGATGAGGAGGCTGAACAAATGATTCGAGAGGCGGATTTGGATGGCGATGGCAGAGTGAGTTACGAAGAGTTTGCCAACATTATGACAATCACTTGATCCCATTTCAACATTACTAACAACAATCTTTCATTCATGTTTGTTCATACCATTTGCCCTCATTGTGTACCAATAAAGTTCAATAATAATAATAATTTATTATCGTCTTAATTTTTTTTT

mRNA sequence

ATGGCGGTTGAAGCTCTTACTGAAGATCAGATTGCTGATTTCCGGGAAGCCTTCTGTTTAATTGACAAGGATGCGGATGGATTCATCACTGTGGAGGAGCTAGCGGCAGTGATTCAGTCATTGGATGGACATCCCACCAAGAATGAAGTTAGAGATATGTTATGCGAAGTGGATGTGGATGCTAATGGGACGATAGATTTTGATGAGTTCCTGAATGTGATGGCAAGGAAAGTGCAGGGCAATGTGACGGAGGAGCTAAAAGAGGCCTTCAAAGTGTTTGATAGGGACCAAGATGGTTATATCTCAGCTTTTGAGCTGAGAAATGTAATGATAAATTTGGGAGAGAGATTGACAGATGAGGAGGCTGAACAAATGATTCGAGAGGCGGATTTGGATGGCGATGGCAGAGTGAGTTACGAAGAGTTTGCCAACATTATGACAATCACTTGATCCCATTTCAACATTACTAACAACAATCTTTCATTCATGTTTGTTCATACCATTTGCCCTCATTGTGTACCAATAAAGTTCAATAATAATAATAATTTATTATCGTCTTAATTTTTTTTT

Coding sequence (CDS)

ATGGCGGTTGAAGCTCTTACTGAAGATCAGATTGCTGATTTCCGGGAAGCCTTCTGTTTAATTGACAAGGATGCGGATGGATTCATCACTGTGGAGGAGCTAGCGGCAGTGATTCAGTCATTGGATGGACATCCCACCAAGAATGAAGTTAGAGATATGTTATGCGAAGTGGATGTGGATGCTAATGGGACGATAGATTTTGATGAGTTCCTGAATGTGATGGCAAGGAAAGTGCAGGGCAATGTGACGGAGGAGCTAAAAGAGGCCTTCAAAGTGTTTGATAGGGACCAAGATGGTTATATCTCAGCTTTTGAGCTGAGAAATGTAATGATAAATTTGGGAGAGAGATTGACAGATGAGGAGGCTGAACAAATGATTCGAGAGGCGGATTTGGATGGCGATGGCAGAGTGAGTTACGAAGAGTTTGCCAACATTATGACAATCACTTGA

Protein sequence

MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEAEQMIREADLDGDGRVSYEEFANIMTIT

Homology

[Close]

BLAST of Carg08997 vs. NCBI nr
Match: KAG6606405.1 (Calmodulin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036347.1 Calmodulin-like protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD
Sbjct: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFANIMTIT
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 149

[Close]

BLAST of Carg08997 vs. NCBI nr
Match: XP_023534262.1 (calmodulin-like protein 8 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 5.1e-75
Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDM+CEVDVD
Sbjct: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMICEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           ANGTIDFDEFLNVMARKV+GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  ANGTIDFDEFLNVMARKVKGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFANIMTIT
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 149

[Close]

BLAST of Carg08997 vs. NCBI nr
Match: XP_022931143.1 (calmodulin-like protein 8 [Cucurbita moschata])

HSP 1 Score: 290.8 bits (743), Expect = 6.6e-75
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNE+RDM+CEVDVD
Sbjct: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEIRDMICEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           ANGTIDFDEFLNVMARKV+GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  ANGTIDFDEFLNVMARKVKGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFANIMTIT
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 149

[Close]

BLAST of Carg08997 vs. NCBI nr
Match: XP_022995507.1 (calmodulin-like protein 8 [Cucurbita maxima])

HSP 1 Score: 288.5 bits (737), Expect = 3.3e-74
Identity = 145/149 (97.32%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MAVEALTEDQIADFREAFCLIDKDADGFI+VEELAAVIQSLDGHPTKNEVRDM+CEVDVD
Sbjct: 1   MAVEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMICEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           ANGTIDFDEFLNVMARK++GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  ANGTIDFDEFLNVMARKLKGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFANIMTIT
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 149

[Close]

BLAST of Carg08997 vs. NCBI nr
Match: XP_038888336.1 (calmodulin-like [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 8.4e-70
Identity = 137/149 (91.95%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MA EALTEDQ+ADFREAFCLIDKDADGFITVEEL AVIQSLDGHPTKNEVRDM+ EVDVD
Sbjct: 1   MAAEALTEDQVADFREAFCLIDKDADGFITVEELGAVIQSLDGHPTKNEVRDMISEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           +NGTIDFDEFLNVMARK++ NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD+
Sbjct: 61  SNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFA IMTI+
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Carg08997 vs. ExPASy Swiss-Prot
Match: O23320 (Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-50
Identity = 99/147 (67.35%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           M   ALT+DQI +F+EAFCL DKD DG ITVEELA VI+SLD +PT+ E+ D++ E+D D
Sbjct: 1   MEETALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSD 60

Query: 61  ANGTIDFDEFLNVMARKVQ-GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD 120
           +NGTI+F EFLN+MA+K+Q  +  EELKEAFKVFD+DQ+GYISA EL +VMINLGE+LTD
Sbjct: 61  SNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTD 120

Query: 121 EEAEQMIREADLDGDGRVSYEEFANIM 147
           EE EQMI+EADLDGDG+V+Y+EF  +M
Sbjct: 121 EEVEQMIKEADLDGDGQVNYDEFVKMM 147

[Close]

BLAST of Carg08997 vs. ExPASy Swiss-Prot
Match: Q9LIK5 (Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-49
Identity = 95/146 (65.07%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           + LT++QI +F+EAFCL DKD DG IT +ELA VI+SLD +PT+ E++DM+ E+D D NG
Sbjct: 26  QELTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNG 85

Query: 64  TIDFDEFLNVMARKVQ-GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TI+F EFLN+MA ++Q  +  EELKEAFKVFD+DQ+GYISA ELR+VMINLGE+LTDEE 
Sbjct: 86  TIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 145

Query: 124 EQMIREADLDGDGRVSYEEFANIMTI 149
           +QMI+EADLDGDG+V+Y+EF  +M I
Sbjct: 146 DQMIKEADLDGDGQVNYDEFVRMMMI 171

[Close]

BLAST of Carg08997 vs. ExPASy Swiss-Prot
Match: P27161 (Calmodulin OS=Solanum lycopersicum OX=4081 GN=CALM1 PE=2 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 4.7e-47
Identity = 94/144 (65.28%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           E LTE+QIA+F+EAF L DKD DG IT +EL  V++SL  +PT+ E++DM+ EVD D NG
Sbjct: 3   EQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNG 62

Query: 64  TIDFDEFLNVMARKVQG-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TIDF EFLN+MARK++  +  EELKEAFKVFD+DQ+G+ISA ELR+VM NLGE+LTDEE 
Sbjct: 63  TIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122

Query: 124 EQMIREADLDGDGRVSYEEFANIM 147
           ++MIREAD+DGDG+V+YEEF  +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVRMM 146

[Close]

BLAST of Carg08997 vs. ExPASy Swiss-Prot
Match: P27163 (Calmodulin-2 OS=Petunia hybrida OX=4102 GN=CAM72 PE=2 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 7.9e-47
Identity = 93/144 (64.58%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           E LTE+QIA+F+EAF L DKD DG IT +EL  V++SL  +PT+ E++DM+ EVD D NG
Sbjct: 3   EQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNG 62

Query: 64  TIDFDEFLNVMARKVQG-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TIDF EFLN+MARK++  +  EELKEAFKVFD+DQ+GYISA ++R+VM NLGE+LTDEE 
Sbjct: 63  TIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEV 122

Query: 124 EQMIREADLDGDGRVSYEEFANIM 147
           ++MIREAD+DGDG+V+YEEF  +M
Sbjct: 123 DEMIREADMDGDGQVNYEEFVRMM 146

[Close]

BLAST of Carg08997 vs. ExPASy Swiss-Prot
Match: P13868 (Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-46
Identity = 93/144 (64.58%), Postives = 119/144 (82.64%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           E LTE+QIA+F+EAF L DKD DG IT +EL  V++SL  +PT+ E++DM+ E D D NG
Sbjct: 3   EQLTEEQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQNG 62

Query: 64  TIDFDEFLNVMARKVQG-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TIDF EFLN+MARK++  +  EELKEAFKVFD+DQ+G+ISA ELR+VM NLGE+LTDEE 
Sbjct: 63  TIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122

Query: 124 EQMIREADLDGDGRVSYEEFANIM 147
           ++MIREAD+DGDG+V+YEEF  +M
Sbjct: 123 DEMIREADIDGDGQVNYEEFVRMM 146

[Close]

BLAST of Carg08997 vs. ExPASy TrEMBL
Match: A0A6J1EXK1 (calmodulin-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111437411 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.2e-75
Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNE+RDM+CEVDVD
Sbjct: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEIRDMICEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           ANGTIDFDEFLNVMARKV+GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  ANGTIDFDEFLNVMARKVKGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFANIMTIT
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 149

[Close]

BLAST of Carg08997 vs. ExPASy TrEMBL
Match: A0A6J1JZ40 (calmodulin-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111491022 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.6e-74
Identity = 145/149 (97.32%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MAVEALTEDQIADFREAFCLIDKDADGFI+VEELAAVIQSLDGHPTKNEVRDM+CEVDVD
Sbjct: 1   MAVEALTEDQIADFREAFCLIDKDADGFISVEELAAVIQSLDGHPTKNEVRDMICEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
           ANGTIDFDEFLNVMARK++GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  ANGTIDFDEFLNVMARKLKGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFANIMTIT
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 149

[Close]

BLAST of Carg08997 vs. ExPASy TrEMBL
Match: A0A6J1CY26 (calmodulin-like OS=Momordica charantia OX=3673 GN=LOC111015270 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.9e-69
Identity = 135/149 (90.60%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MA EALTE+QIADFREAFCLIDKDADGFIT+EELA V+QSLDGHPTKNEVRDM+ EVDVD
Sbjct: 1   MAAEALTEEQIADFREAFCLIDKDADGFITMEELAGVLQSLDGHPTKNEVRDMISEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
            NGTIDFDEFLNVMARK++ NV+EELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE
Sbjct: 61  GNGTIDFDEFLNVMARKMKDNVSEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFA IMTI+
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Carg08997 vs. ExPASy TrEMBL
Match: A0A1S3BL89 (calmodulin-like OS=Cucumis melo OX=3656 GN=LOC103491266 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 136/149 (91.28%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MA EALTEDQIADFREAFCLIDKDADGFITVEEL AVIQSLD HPTKNE+RDM+ EVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
            NGTIDFDEFLNVMARK++ NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD+
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTIT 150
           EAEQMIREADLDGDGRVSYEEFA IMTI+
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTIS 149

[Close]

BLAST of Carg08997 vs. ExPASy TrEMBL
Match: A0A5A7UTD2 (Calmodulin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00850 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           MA EALTEDQIADFREAFCLIDKDADGFITVEEL AVIQSLD HPTKNE+RDM+ EVDVD
Sbjct: 1   MAAEALTEDQIADFREAFCLIDKDADGFITVEELGAVIQSLDVHPTKNEIRDMISEVDVD 60

Query: 61  ANGTIDFDEFLNVMARKVQGNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDE 120
            NGTIDFDEFLNVMARK++ NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD+
Sbjct: 61  NNGTIDFDEFLNVMARKMKDNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDD 120

Query: 121 EAEQMIREADLDGDGRVSYEEFANIMTI 149
           EAEQMIREADLDGDGRVSYEEFA IMTI
Sbjct: 121 EAEQMIREADLDGDGRVSYEEFARIMTI 148

[Close]

BLAST of Carg08997 vs. TAIR 10
Match: AT4G14640.1 (calmodulin 8 )

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-51
Identity = 99/147 (67.35%), Postives = 124/147 (84.35%), Query Frame = 0


Query: 1   MAVEALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVD 60
           M   ALT+DQI +F+EAFCL DKD DG ITVEELA VI+SLD +PT+ E+ D++ E+D D
Sbjct: 1   MEETALTKDQITEFKEAFCLFDKDGDGCITVEELATVIRSLDQNPTEQELHDIITEIDSD 60

Query: 61  ANGTIDFDEFLNVMARKVQ-GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTD 120
           +NGTI+F EFLN+MA+K+Q  +  EELKEAFKVFD+DQ+GYISA EL +VMINLGE+LTD
Sbjct: 61  SNGTIEFAEFLNLMAKKLQESDAEEELKEAFKVFDKDQNGYISASELSHVMINLGEKLTD 120

Query: 121 EEAEQMIREADLDGDGRVSYEEFANIM 147
           EE EQMI+EADLDGDG+V+Y+EF  +M
Sbjct: 121 EEVEQMIKEADLDGDGQVNYDEFVKMM 147

[Close]

BLAST of Carg08997 vs. TAIR 10
Match: AT3G22930.1 (calmodulin-like 11 )

HSP 1 Score: 196.1 bits (497), Expect = 2.1e-50
Identity = 95/146 (65.07%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           + LT++QI +F+EAFCL DKD DG IT +ELA VI+SLD +PT+ E++DM+ E+D D NG
Sbjct: 26  QELTQEQIMEFKEAFCLFDKDGDGCITADELATVIRSLDQNPTEQELQDMITEIDSDGNG 85

Query: 64  TIDFDEFLNVMARKVQ-GNVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TI+F EFLN+MA ++Q  +  EELKEAFKVFD+DQ+GYISA ELR+VMINLGE+LTDEE 
Sbjct: 86  TIEFSEFLNLMANQLQETDADEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 145

Query: 124 EQMIREADLDGDGRVSYEEFANIMTI 149
           +QMI+EADLDGDG+V+Y+EF  +M I
Sbjct: 146 DQMIKEADLDGDGQVNYDEFVRMMMI 171

[Close]

BLAST of Carg08997 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 )

HSP 1 Score: 185.3 bits (469), Expect = 3.7e-47
Identity = 90/144 (62.50%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           + LT+DQI++F+EAF L DKD DG IT +EL  V++SL  +PT+ E++DM+ EVD D NG
Sbjct: 3   DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62

Query: 64  TIDFDEFLNVMARKVQG-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TIDF EFLN+MARK++  +  EELKEAF+VFD+DQ+G+ISA ELR+VM NLGE+LTDEE 
Sbjct: 63  TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122

Query: 124 EQMIREADLDGDGRVSYEEFANIM 147
           ++MIREAD+DGDG+++YEEF  +M
Sbjct: 123 DEMIREADVDGDGQINYEEFVKVM 146

[Close]

BLAST of Carg08997 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 )

HSP 1 Score: 184.1 bits (466), Expect = 8.1e-47
Identity = 90/144 (62.50%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           + LT++QI++F+EAF L DKD DG IT +EL  V++SL  +PT+ E++DM+ EVD D NG
Sbjct: 3   DQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62

Query: 64  TIDFDEFLNVMARKVQG-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TIDF EFLN+MA+K++  +  EELKEAF+VFD+DQ+G+ISA ELR+VM NLGE+LTDEE 
Sbjct: 63  TIDFPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122

Query: 124 EQMIREADLDGDGRVSYEEFANIM 147
           E+MIREAD+DGDG+++YEEF  IM
Sbjct: 123 EEMIREADVDGDGQINYEEFVKIM 146

[Close]

BLAST of Carg08997 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 )

HSP 1 Score: 184.1 bits (466), Expect = 8.1e-47
Identity = 89/144 (61.81%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 4   EALTEDQIADFREAFCLIDKDADGFITVEELAAVIQSLDGHPTKNEVRDMLCEVDVDANG 63
           + LT+DQI++F+EAF L DKD DG IT +EL  V++SL  +PT+ E++DM+ EVD D NG
Sbjct: 3   DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 62

Query: 64  TIDFDEFLNVMARKVQG-NVTEELKEAFKVFDRDQDGYISAFELRNVMINLGERLTDEEA 123
           TIDF EFLN+MARK++  +  EELKEAF+VFD+DQ+G+ISA ELR+VM NLGE+LTDEE 
Sbjct: 63  TIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEV 122

Query: 124 EQMIREADLDGDGRVSYEEFANIM 147
           ++MI+EAD+DGDG+++YEEF  +M
Sbjct: 123 DEMIKEADVDGDGQINYEEFVKVM 146

The following BLAST results are available for this feature:

BLAST of Carg08997 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606405.1	1.0e-75	100.00	Calmodulin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_023534262.1	5.1e-75	98.66	calmodulin-like protein 8 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022931143.1	6.6e-75	97.99	calmodulin-like protein 8 [Cucurbita moschata]	[more]
XP_022995507.1	3.3e-74	97.32	calmodulin-like protein 8 [Cucurbita maxima]	[more]
XP_038888336.1	8.4e-70	91.95	calmodulin-like [Benincasa hispida]	[more]

BLAST of Carg08997 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23320	2.0e-50	67.35	Calmodulin-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=CML8 PE=1 SV=1	[more]
Q9LIK5	2.9e-49	65.07	Calmodulin-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=CML11 PE=2 SV=1	[more]
P27161	4.7e-47	65.28	Calmodulin OS=Solanum lycopersicum OX=4081 GN=CALM1 PE=2 SV=2	[more]
P27163	7.9e-47	64.58	Calmodulin-2 OS=Petunia hybrida OX=4102 GN=CAM72 PE=2 SV=2	[more]
P13868	1.4e-46	64.58	Calmodulin-1 OS=Solanum tuberosum OX=4113 GN=PCM1 PE=1 SV=2	[more]

BLAST of Carg08997 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXK1	3.2e-75	97.99	calmodulin-like protein 8 OS=Cucurbita moschata OX=3662 GN=LOC111437411 PE=4 SV=...	[more]
A0A6J1JZ40	1.6e-74	97.32	calmodulin-like protein 8 OS=Cucurbita maxima OX=3661 GN=LOC111491022 PE=4 SV=1	[more]
A0A6J1CY26	5.9e-69	90.60	calmodulin-like OS=Momordica charantia OX=3673 GN=LOC111015270 PE=4 SV=1	[more]
A0A1S3BL89	1.0e-68	91.28	calmodulin-like OS=Cucumis melo OX=3656 GN=LOC103491266 PE=4 SV=1	[more]
A0A5A7UTD2	1.3e-68	91.89	Calmodulin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G0085...	[more]

BLAST of Carg08997 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14640.1	1.4e-51	67.35	calmodulin 8	[more]
AT3G22930.1	2.1e-50	65.07	calmodulin-like 11	[more]
AT3G43810.1	3.7e-47	62.50	calmodulin 7	[more]
AT1G66410.1	8.1e-47	62.50	calmodulin 4	[more]
AT2G41110.1	8.1e-47	61.81	calmodulin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00450	RECOVERIN	coord: 53..74 score: 33.22 coord: 99..117 score: 21.86 coord: 77..96 score: 34.04
None	No IPR available	GENE3D	1.10.238.10		coord: 1..80 e-value: 6.7E-26 score: 92.5
None	No IPR available	GENE3D	1.10.238.10		coord: 81..149 e-value: 2.5E-27 score: 97.1
None	No IPR available	PANTHER	PTHR23050:SF211	CALMODULIN-LIKE PROTEIN 9	coord: 4..147
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 4..147
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 13..41 e-value: 6.4E-6 score: 35.7 coord: 121..149 e-value: 2.7E-6 score: 36.9 coord: 49..77 e-value: 7.2E-6 score: 35.5 coord: 85..113 e-value: 4.3E-7 score: 39.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 14..74 e-value: 1.9E-13 score: 50.6 coord: 84..146 e-value: 4.6E-17 score: 62.2
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 117..149 score: 14.931837
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 45..80 score: 12.616518
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 9..44 score: 14.820255
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 81..116 score: 15.601326
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 85..147 e-value: 2.60419E-21 score: 79.5141
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 22..34
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 58..70
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 94..106
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 130..142
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 4..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08997-RA	Carg08997-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)+] activity
molecular_function	GO:0005509	calcium ion binding