Carg08885 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08885
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	GRAM domain-containing protein
Location	Carg_Chr02: 9314014 .. 9314514 (+)
RNA-Seq Expression	Carg08885
Synteny	Carg08885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGGCTTCATCAATGGGCGAAGTTACTTACAGAAGGTGACTATGAAAAAGTGTTCCAGCAGACGTTTGGTTTTACTGATGGAGACAAATACTTGGGCCTTTGCTTGTGTCTGAACACTTCCTCTGGGCCTGTAAATGGGACTCTATACATATCCACAAAAATGGTGGCCATCTATAGTAAGTTTCCTCTTCGTCACTCTTCGTCTCCTGGCCAGCCACAGTGGATCCATGACAGGGTATGTCTGACCCTATTATTCTTGAAAATATTTTTCTCTGATGAATCTGAAACAGAATTGGATATGGAATTTAGGCCATATTTGGTAACGTAAAACAAAATGGTGTAAGAGTACTAATAGGAGTTATGTTAGGAATGTTAGTAGAATAGTAGCAAGGGCATAGCAATAATTAATTAGGGGTGTCTTGGCTGTAAATAGAGGGAGTTAGGGACCGTAGAAGAGGGATCATTCCGGGACTTAGGAGGGAGATTACCCTCTTAA

mRNA sequence

ATGGTCAGGCTTCATCAATGGGCGAAGTTACTTACAGAAGGTGACTATGAAAAAGTGTTCCAGCAGACGTTTGGTTTTACTGATGGAGACAAATACTTGGGCCTTTGCTTGTGTCTGAACACTTCCTCTGGGCCTGTAAATGGGACTCTATACATATCCACAAAAATGGTGGCCATCTATAGTAAGTTTCCTCTTCGTCACTCTTCGTCTCCTGGCCAGCCACAGTGGATCCATGACAGGAGGGAGTTAGGGACCGTAGAAGAGGGATCATTCCGGGACTTAGGAGGGAGATTACCCTCTTAA

Coding sequence (CDS)

ATGGTCAGGCTTCATCAATGGGCGAAGTTACTTACAGAAGGTGACTATGAAAAAGTGTTCCAGCAGACGTTTGGTTTTACTGATGGAGACAAATACTTGGGCCTTTGCTTGTGTCTGAACACTTCCTCTGGGCCTGTAAATGGGACTCTATACATATCCACAAAAATGGTGGCCATCTATAGTAAGTTTCCTCTTCGTCACTCTTCGTCTCCTGGCCAGCCACAGTGGATCCATGACAGGAGGGAGTTAGGGACCGTAGAAGAGGGATCATTCCGGGACTTAGGAGGGAGATTACCCTCTTAA

Protein sequence

MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIYSKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS

Homology

[Close]

BLAST of Carg08885 vs. NCBI nr
Match: KAG7036238.1 (GEM-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.9 bits (546), Expect = 3.1e-52
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIY 60
           MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIY
Sbjct: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIY 60

Query: 61  SKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS 101
           SKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS
Sbjct: 61  SKFPLRHSSSPGQPQWIHDRRELGTVEEGSFRDLGGRLPS 100

[Close]

BLAST of Carg08885 vs. NCBI nr
Match: XP_023532950.1 (GLABRA2 expression modulator-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 77/80 (96.25%), Postives = 77/80 (96.25%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLCLNTSSGPVNGTLYISTKMVAIY 60
           MVRLHQWAKLLTE DYEKVFQQTFGFTDGDKYLGLCL LNTSSGPVNGTLYISTKMVA Y
Sbjct: 75  MVRLHQWAKLLTERDYEKVFQQTFGFTDGDKYLGLCLRLNTSSGPVNGTLYISTKMVAFY 134

Query: 61  SKFPLRHSSSPGQPQWIHDR 81
           SKFPLRHSSSPGQPQWIHDR
Sbjct: 135 SKFPLRHSSSPGQPQWIHDR 154

[Close]

BLAST of Carg08885 vs. NCBI nr
Match: XP_008460396.1 (PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 58/78 (74.36%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA 
Sbjct: 104 MARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNGTLYISTKRVAF 163

Query: 61  YSKFPLRHSSSPGQPQWI 78
            S FPL +  SPGQPQWI
Sbjct: 164 CSAFPLCYYPSPGQPQWI 181

[Close]

BLAST of Carg08885 vs. NCBI nr
Match: XP_008460399.1 (PREDICTED: GEM-like protein 2 isoform X3 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 58/78 (74.36%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA 
Sbjct: 50  MARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNGTLYISTKRVAF 109

Query: 61  YSKFPLRHSSSPGQPQWI 78
            S FPL +  SPGQPQWI
Sbjct: 110 CSAFPLCYYPSPGQPQWI 127

[Close]

BLAST of Carg08885 vs. NCBI nr
Match: XP_008460398.1 (PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 58/78 (74.36%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA 
Sbjct: 74  MARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNGTLYISTKRVAF 133

Query: 61  YSKFPLRHSSSPGQPQWI 78
            S FPL +  SPGQPQWI
Sbjct: 134 CSAFPLCYYPSPGQPQWI 151

[Close]

BLAST of Carg08885 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RL Q  K++ EG  E+VFQ+ FG    +K L   +C ++T+SGPV G +YIS + +A 
Sbjct: 89  MARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAF 148

Query: 61  YSKFPLRHSSSPG 73
            S + +R  SS G
Sbjct: 149 CSDYAIRLPSSAG 161

[Close]

BLAST of Carg08885 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 6.4e-08
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 3   RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYS 62
           R+ Q  K+L EG YEKVF+QTF     +K L    C L+TS+GPV G +Y+ST  +A  S
Sbjct: 123 RIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSS 182

Query: 63  KFPLRH 68
             PL +
Sbjct: 183 DNPLSY 188

[Close]

BLAST of Carg08885 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-07
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M R+ Q  K+  EG YEK+F+QTF     ++ L    C L+TS+GPV G LYIS+  +A 
Sbjct: 158 MGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAY 217

Query: 61  YSKFPLRHSSSPGQPQW 77
            S  PL + +   Q +W
Sbjct: 218 CSDNPLSYKNG-DQTEW 233

[Close]

BLAST of Carg08885 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.2e-07
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0


Query: 8   AKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYSKFPLR 67
           AK +T+G +E +F+Q FG    +       C L+T++GPV GT+Y+S   VA  S  PL 
Sbjct: 133 AKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLY 192

Query: 68  HSSSPGQPQWIHDR 81
            ++  GQ  W + R
Sbjct: 193 FTAPSGQESWSYYR 206

[Close]

BLAST of Carg08885 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 4.6e-06
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M R+ Q  K+L EG YEK+F+QTF     ++      C L+TS+GPV G LY+ST  +A 
Sbjct: 111 MGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAY 170

Query: 61  YS 62
            S
Sbjct: 171 CS 172

[Close]

BLAST of Carg08885 vs. ExPASy TrEMBL
Match: A0A1S3CCH4 (GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.3e-23
Identity = 58/78 (74.36%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA 
Sbjct: 104 MARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNGTLYISTKRVAF 163

Query: 61  YSKFPLRHSSSPGQPQWI 78
            S FPL +  SPGQPQWI
Sbjct: 164 CSAFPLCYYPSPGQPQWI 181

[Close]

BLAST of Carg08885 vs. ExPASy TrEMBL
Match: A0A1S3CCV4 (GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.3e-23
Identity = 58/78 (74.36%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA 
Sbjct: 50  MARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNGTLYISTKRVAF 109

Query: 61  YSKFPLRHSSSPGQPQWI 78
            S FPL +  SPGQPQWI
Sbjct: 110 CSAFPLCYYPSPGQPQWI 127

[Close]

BLAST of Carg08885 vs. ExPASy TrEMBL
Match: A0A1S3CCD7 (GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.3e-23
Identity = 58/78 (74.36%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG Y+KVFQQTFGF DGDKYL    C L+TSSGPVNGTLYISTK VA 
Sbjct: 74  MARLHQGTKLLTEGGYKKVFQQTFGFVDGDKYLDCFACYLSTSSGPVNGTLYISTKRVAF 133

Query: 61  YSKFPLRHSSSPGQPQWI 78
            S FPL +  SPGQPQWI
Sbjct: 134 CSAFPLCYYPSPGQPQWI 151

[Close]

BLAST of Carg08885 vs. ExPASy TrEMBL
Match: A0A6J1E018 (GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 9.5e-23
Identity = 61/96 (63.54%), Postives = 68/96 (70.83%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RLHQ  KLLTEG YEKVFQQTFGF  GDKY+    C L+TSSGPVNGTLYISTK VA 
Sbjct: 68  MARLHQGTKLLTEGGYEKVFQQTFGFIHGDKYVDSFACYLSTSSGPVNGTLYISTKRVAF 127

Query: 61  YSKFPLRHSSSPGQPQWIHDR-----RELGTVEEGS 91
            S+FPL +  SPGQ QWIH +      +LGT+   S
Sbjct: 128 CSEFPLCYYPSPGQQQWIHYKVVVAVDQLGTINTSS 163

[Close]

BLAST of Carg08885 vs. ExPASy TrEMBL
Match: A0A6J1DUB7 (GEM-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111023171 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.6e-17
Identity = 50/77 (64.94%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 3   RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYS 62
           RL Q  KL+TEG  EK+FQ TFG   GDKYL    C L+TSSGPVNGTLYISTK VA  S
Sbjct: 71  RLIQGTKLVTEGGPEKLFQHTFGVIPGDKYLHSYACYLSTSSGPVNGTLYISTKRVAFGS 130

Query: 63  KFPLRHSSSPGQPQWIH 79
           + PL +SSSPGQP+W++
Sbjct: 131 ESPLCYSSSPGQPEWMY 147

[Close]

BLAST of Carg08885 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein )

HSP 1 Score: 60.5 bits (145), Expect = 9.1e-10
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RL Q  K++ EG  E+VFQ+ FG    +K L   +C ++T+SGPV G +YIS + +A 
Sbjct: 89  MARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAF 148

Query: 61  YSKFPLRHSSSPG 73
            S + +R  SS G
Sbjct: 149 CSDYAIRLPSSAG 161

[Close]

BLAST of Carg08885 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein )

HSP 1 Score: 60.5 bits (145), Expect = 9.1e-10
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M RL Q  K++ EG  E+VFQ+ FG    +K L   +C ++T+SGPV G +YIS + +A 
Sbjct: 84  MARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAF 143

Query: 61  YSKFPLRHSSSPG 73
            S + +R  SS G
Sbjct: 144 CSDYAIRLPSSAG 156

[Close]

BLAST of Carg08885 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 )

HSP 1 Score: 58.2 bits (139), Expect = 4.5e-09
Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 3   RLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAIYS 62
           R+ Q  K+L EG YEKVF+QTF     +K L    C L+TS+GPV G +Y+ST  +A  S
Sbjct: 123 RIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSS 182

Query: 63  KFPLRH 68
             PL +
Sbjct: 183 DNPLSY 188

[Close]

BLAST of Carg08885 vs. TAIR 10
Match: AT2G22475.2 (GRAM domain family protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M R+ Q  K+  EG YEK+F+QTF     ++ L    C L+TS+GPV G LYIS+  +A 
Sbjct: 158 MGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAY 217

Query: 61  YSKFPLRHSSSPGQPQW 77
            S  PL + +   Q +W
Sbjct: 218 CSDNPLSYKNG-DQTEW 233

[Close]

BLAST of Carg08885 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08
Identity = 32/77 (41.56%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 1   MVRLHQWAKLLTEGDYEKVFQQTFGFTDGDKYLGLCLC-LNTSSGPVNGTLYISTKMVAI 60
           M R+ Q  K+  EG YEK+F+QTF     ++ L    C L+TS+GPV G LYIS+  +A 
Sbjct: 158 MGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAY 217

Query: 61  YSKFPLRHSSSPGQPQW 77
            S  PL + +   Q +W
Sbjct: 218 CSDNPLSYKNG-DQTEW 233

The following BLAST results are available for this feature:

BLAST of Carg08885 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036238.1	3.1e-52	100.00	GEM-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023532950.1	2.8e-37	96.25	GLABRA2 expression modulator-like [Cucurbita pepo subsp. pepo]	[more]
XP_008460396.1	1.5e-22	74.36	PREDICTED: GEM-like protein 2 isoform X1 [Cucumis melo] >XP_008460397.1 PREDICTE...	[more]
XP_008460399.1	1.5e-22	74.36	PREDICTED: GEM-like protein 2 isoform X3 [Cucumis melo]	[more]
XP_008460398.1	1.5e-22	74.36	PREDICTED: GEM-like protein 2 isoform X2 [Cucumis melo]	[more]

BLAST of Carg08885 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M122	1.3e-08	42.47	GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1	[more]
Q9SE96	6.4e-08	46.97	GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1	[more]
Q8S8F8	2.4e-07	41.56	GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1	[more]
Q9LYV6	9.2e-07	37.84	GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1	[more]
Q9M063	4.6e-06	45.16	Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV...	[more]

BLAST of Carg08885 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCH4	7.3e-23	74.36	GEM-like protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1	[more]
A0A1S3CCV4	7.3e-23	74.36	GEM-like protein 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1	[more]
A0A1S3CCD7	7.3e-23	74.36	GEM-like protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499226 PE=3 SV=1	[more]
A0A6J1E018	9.5e-23	63.54	GEM-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111026148 PE=3 SV=1	[more]
A0A6J1DUB7	4.6e-17	64.94	GEM-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111023171 PE=3 SV=1	[more]

BLAST of Carg08885 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01600.1	9.1e-10	42.47	GRAM domain family protein	[more]
AT4G01600.2	9.1e-10	42.47	GRAM domain family protein	[more]
AT1G28200.1	4.5e-09	46.97	FH interacting protein 1	[more]
AT2G22475.2	1.7e-08	41.56	GRAM domain family protein	[more]
AT2G22475.1	1.7e-08	41.56	GRAM domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037848	GEM-like protein	PANTHER	PTHR31969	GEM-LIKE PROTEIN 2	coord: 1..77
None	No IPR available	PANTHER	PTHR31969:SF9	GEM-LIKE PROTEIN 2	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08885-RA	Carg08885-RA	mRNA