Carg08258 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg08258
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein DOG1-like 4
Location	Carg_Chr05: 2999822 .. 3000502 (+)
RNA-Seq Expression	Carg08258
Synteny	Carg08258

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACACCCACAACCTGTCCTTCCCAATTTCCACAATTTCCACGAATCCTGGCTCAGCACCCAACAATCCTTCCTCCAACAGCTTCTCGATTCCGCAGCCTTACAGAGCAACGACAAGGAAGACGCCCAATTGCGCTTAATCGCCCAAGTCCTCGCCCACTACCAGCAATACTACGACGAGCTCTCCAAGGCCGCCGCCGAAGACATCTTCCAAGTCCTCTCCGCCCCATGGCTCACTTCTTTTGAGCGCACCTTTCTTTGGATTTCTGGCTTCAAGCCTTCCCTCCTCATCCGCCTCCTCTTCGCCGCCGTCAACGACTTGACCCCAGCGCAATCGGCTAGACTGAACGAGGTCAGAGCTGAGGTCAAGTGGAAGGAGAGGGAGTTGACTGATGCTATGGCTAGTTTGCAGGAGACAATAGCGGCGCCGCCGATGTTGGAGCTGGCGCGGCGGGTCGGAGCTGGGAGGCTTGTGGATGGAGAGATTTGTGAAATGGAAAATGCGATAGAGGAGCTGAAGATGGGAATGTTGAGGGTTGCGGATAGAGCGGATTTGCTGCGTGGGTCGACGGTGATGACGGTGGTGGAGATTCTGAATTCCGATCAGATGGTGAGGGTTTTAGTGGCGGTGGTCGGGTTTCAATTGCGGATTAGAAGATGGGGCCTTCAGAGAGATTGA

mRNA sequence

ATGGCACACCCACAACCTGTCCTTCCCAATTTCCACAATTTCCACGAATCCTGGCTCAGCACCCAACAATCCTTCCTCCAACAGCTTCTCGATTCCGCAGCCTTACAGAGCAACGACAAGGAAGACGCCCAATTGCGCTTAATCGCCCAAGTCCTCGCCCACTACCAGCAATACTACGACGAGCTCTCCAAGGCCGCCGCCGAAGACATCTTCCAAGTCCTCTCCGCCCCATGGCTCACTTCTTTTGAGCGCACCTTTCTTTGGATTTCTGGCTTCAAGCCTTCCCTCCTCATCCGCCTCCTCTTCGCCGCCGTCAACGACTTGACCCCAGCGCAATCGGCTAGACTGAACGAGGTCAGAGCTGAGGTCAAGTGGAAGGAGAGGGAGTTGACTGATGCTATGGCTAGTTTGCAGGAGACAATAGCGGCGCCGCCGATGTTGGAGCTGGCGCGGCGGGTCGGAGCTGGGAGGCTTGTGGATGGAGAGATTTGTGAAATGGAAAATGCGATAGAGGAGCTGAAGATGGGAATGTTGAGGGTTGCGGATAGAGCGGATTTGCTGCGTGGGTCGACGGTGATGACGGTGGTGGAGATTCTGAATTCCGATCAGATGGTGAGGGTTTTAGTGGCGGTGGTCGGGTTTCAATTGCGGATTAGAAGATGGGGCCTTCAGAGAGATTGA

Coding sequence (CDS)

ATGGCACACCCACAACCTGTCCTTCCCAATTTCCACAATTTCCACGAATCCTGGCTCAGCACCCAACAATCCTTCCTCCAACAGCTTCTCGATTCCGCAGCCTTACAGAGCAACGACAAGGAAGACGCCCAATTGCGCTTAATCGCCCAAGTCCTCGCCCACTACCAGCAATACTACGACGAGCTCTCCAAGGCCGCCGCCGAAGACATCTTCCAAGTCCTCTCCGCCCCATGGCTCACTTCTTTTGAGCGCACCTTTCTTTGGATTTCTGGCTTCAAGCCTTCCCTCCTCATCCGCCTCCTCTTCGCCGCCGTCAACGACTTGACCCCAGCGCAATCGGCTAGACTGAACGAGGTCAGAGCTGAGGTCAAGTGGAAGGAGAGGGAGTTGACTGATGCTATGGCTAGTTTGCAGGAGACAATAGCGGCGCCGCCGATGTTGGAGCTGGCGCGGCGGGTCGGAGCTGGGAGGCTTGTGGATGGAGAGATTTGTGAAATGGAAAATGCGATAGAGGAGCTGAAGATGGGAATGTTGAGGGTTGCGGATAGAGCGGATTTGCTGCGTGGGTCGACGGTGATGACGGTGGTGGAGATTCTGAATTCCGATCAGATGGTGAGGGTTTTAGTGGCGGTGGTCGGGTTTCAATTGCGGATTAGAAGATGGGGCCTTCAGAGAGATTGA

Protein sequence

MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYDELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD

Homology

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BLAST of Carg08258 vs. NCBI nr
Match: KAG7029696.1 (Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.0 bits (1120), Expect = 1.9e-118
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV
Sbjct: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD
Sbjct: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 226

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BLAST of Carg08258 vs. NCBI nr
Match: KAG6598755.1 (Protein ZW2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.1 bits (1115), Expect = 7.4e-118
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEME+AIEELKMGMLRV
Sbjct: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMESAIEELKMGMLRV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD
Sbjct: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 226

[Close]

BLAST of Carg08258 vs. NCBI nr
Match: XP_022962261.1 (protein DOG1-like 4 [Cucurbita moschata])

HSP 1 Score: 432.6 bits (1111), Expect = 2.1e-117
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEME+AIEELKMGMLRV
Sbjct: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMESAIEELKMGMLRV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           ADRADLLRGSTVMTVVEILNSDQMVRVL AVVGFQLRIRRWGLQRD
Sbjct: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLAAVVGFQLRIRRWGLQRD 226

[Close]

BLAST of Carg08258 vs. NCBI nr
Match: XP_023547060.1 (protein DOG1-like 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 430.6 bits (1106), Expect = 8.1e-117
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKW ERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEME+AIEELKMGMLRV
Sbjct: 121 AEVKWNERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMESAIEELKMGMLRV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           ADRADLLRGSTVMTVVEILNSDQMVRVL AVVGFQLRIRRWGLQRD
Sbjct: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLAAVVGFQLRIRRWGLQRD 226

[Close]

BLAST of Carg08258 vs. NCBI nr
Match: XP_022997259.1 (protein DOG1-like 4 [Cucurbita maxima])

HSP 1 Score: 422.2 bits (1084), Expect = 2.9e-114
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVD EICEME+AIE+LKMGML V
Sbjct: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDREICEMESAIEDLKMGMLGV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           AD+ADLLRGSTVMTVVE LNSDQMVRVL AVVGFQLR+RRWGLQRD
Sbjct: 181 ADKADLLRGSTVMTVVECLNSDQMVRVLAAVVGFQLRVRRWGLQRD 226

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BLAST of Carg08258 vs. ExPASy Swiss-Prot
Match: Q9SLV1 (Protein ZW2 OS=Arabidopsis thaliana OX=3702 GN=ZW2 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 88/219 (40.18%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 11  FHNFHESWLSTQQSFLQQ---LLDSAALQSNDKEDAQLRLIAQVLAHYQQYYDELSKA-- 70
           F +F   WL   + F+QQ   L D   + +  +E++   L++  L+HY QYY+E S A  
Sbjct: 10  FASFFNDWLCRHRQFVQQLAHLADETTIVTPIEEES---LVSNFLSHYLQYYEEKSVAMS 69

Query: 71  -AAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVK 130
            A +DI+   S PWL+S+E+  LWI GFKP ++ +L+  +VNDLT  Q  +L  +R E K
Sbjct: 70  VAGDDIYDFFSPPWLSSYEKLILWIGGFKPGMVFKLITTSVNDLTSHQIDQLESIRLETK 129

Query: 131 WKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVADRA 190
            +ER+L    A LQ+++  P ++   RR+G  RL +GE  EME+A+E LK+ M++    A
Sbjct: 130 RRERDLMRRFALLQQSVGDPLLMVPFRRIGVLRLGEGEQPEMEDAMEVLKVEMIKAMKNA 189

Query: 191 DLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGL 224
           D LR  TV  VVE+LN  Q +++L A   F LR+R  G+
Sbjct: 190 DQLRCVTVGKVVEVLNPRQSIKLLRAAGEFYLRLRDLGV 225

[Close]

BLAST of Carg08258 vs. ExPASy Swiss-Prot
Match: O04515 (Protein RESPONSE TO ABA AND SALT 1 OS=Arabidopsis thaliana OX=3702 GN=RAS1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.9e-32
Identity = 82/215 (38.14%), Postives = 128/215 (59.53%), Query Frame = 0


Query: 10  NFHNFHESWLSTQQSFLQQLLDSAALQSNDK--EDAQLRLIAQVLAHYQQYYDELSKA-- 69
           +F  F + WL   + F++QL+ +++L   ++   + Q  L+AQ L+H  QYY E   +  
Sbjct: 9   SFTIFVDGWLIRHRYFVEQLMCASSLDETNRISLEEQQSLVAQFLSHCLQYYQEKFASVS 68

Query: 70  -AAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVK 129
            A +++F     PW  S+ +  LW+  FKPSL+ +L   +V DLT  Q  R++ +++E +
Sbjct: 69  LAGDNVFTFFCPPWFNSYAKLILWVGDFKPSLVFKLTEVSVADLTRHQKDRISSLKSETR 128

Query: 130 WKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVADRA 189
            KERE+    A +Q+++A PP++  ARRVGA  +VDGE  ++E A+E LK GM    + A
Sbjct: 129 RKEREVMRDFALVQQSVADPPVMLAARRVGAVGMVDGEETDLEEAMEVLKAGMAAAMNNA 188

Query: 190 DLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIR 220
           D LR STV  VVEIL   Q ++VL  +    LR+R
Sbjct: 189 DQLRCSTVGKVVEILTPPQAIKVLRTIGQLHLRLR 223

[Close]

BLAST of Carg08258 vs. ExPASy Swiss-Prot
Match: Q39163 (Transcription factor TGA5 OS=Arabidopsis thaliana OX=3702 GN=TGA5 PE=1 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 63/212 (29.72%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 15  HESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQ-VLAHYQQYYDELSKAAAEDIFQV 74
           +  W   +   +++L  S+A+ S+   D++LR+I   V+AHY++ Y     AA  D+F +
Sbjct: 118 YRRWQEDKNRQMKEL--SSAIDSH-ATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHL 177

Query: 75  LSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDA 134
           LS  W T  ER FLW+ GF+ S L++L+ + +  LT  QS  +N ++   +  E  L+  
Sbjct: 178 LSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQG 237

Query: 135 MASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVAD------RADLL 194
           M +LQ++        LA  + +G L       + + + ++ M M ++        +AD L
Sbjct: 238 MDNLQQS--------LADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNL 297

Query: 195 RGSTVMTVVEILNSDQMVRVLVAVVGFQLRIR 220
           R  T   +V +L + Q  R L+AV  + LR+R
Sbjct: 298 RLQTYQQMVRLLTTRQSARALLAVHNYTLRLR 318

[Close]

BLAST of Carg08258 vs. ExPASy Swiss-Prot
Match: Q39162 (Transcription factor TGA4 OS=Arabidopsis thaliana OX=3702 GN=TGA4 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 67/204 (32.84%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 18  WLSTQQSFLQQLLDSAALQSNDKEDAQLR-LIAQVLAHYQQYYDELSKAAAEDIFQVLSA 77
           W+  Q    +Q+ +   +      D +LR L+   + HY Q +   S AA  D+F V+S 
Sbjct: 159 WVEEQN---RQICELRTVLHGQVSDIELRSLVENAMKHYFQLFRMKSAAAKIDVFYVMSG 218

Query: 78  PWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDAMAS 137
            W TS ER FLWI GF+PS L+++L    + LT  Q   +  +R   +  E  L+  M  
Sbjct: 219 MWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLRQSCQQAEDALSQGMEK 278

Query: 138 LQETIAAPPMLELARRVGAGRLVDGE-ICEMENAIEELKMGMLRVADRADLLRGSTVMTV 197
           LQ T        LA  V AG+L +G  I +M  A+E L+  ++   ++AD LR  T+  +
Sbjct: 279 LQHT--------LAESVAAGKLGEGSYIPQMTCAMERLE-ALVSFVNQADHLRHETLQQM 338

Query: 198 VEILNSDQMVRVLVAVVGFQLRIR 220
             IL + Q  R L+A+  +  R+R
Sbjct: 339 HRILTTRQAARGLLALGEYFQRLR 350

[Close]

BLAST of Carg08258 vs. ExPASy Swiss-Prot
Match: P43273 (Transcription factor TGA2 OS=Arabidopsis thaliana OX=3702 GN=TGA2 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 60/212 (28.30%), Postives = 104/212 (49.06%), Query Frame = 0


Query: 15  HESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQ-VLAHYQQYYDELSKAAAEDIFQV 74
           H  WL  +   + +L  +    + D E   LR+I   V+AHY++ +   S AA  D+F +
Sbjct: 118 HSRWLEEKNKQMNELRSALNAHAGDSE---LRIIVDGVMAHYEELFRIKSNAAKNDVFHL 177

Query: 75  LSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDA 134
           LS  W T  ER FLW+ GF+ S L++LL   +  +T  Q   +N ++   +  E  L+  
Sbjct: 178 LSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQG 237

Query: 135 MASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVAD------RADLL 194
           M SLQ++        LA  + +G L       + + + ++ M M ++        +AD L
Sbjct: 238 MESLQQS--------LADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNL 297

Query: 195 RGSTVMTVVEILNSDQMVRVLVAVVGFQLRIR 220
           R  T+  ++ +L + Q  R L+A+  +  R+R
Sbjct: 298 RLQTLQQMIRVLTTRQSARALLAIHDYFSRLR 318

[Close]

BLAST of Carg08258 vs. ExPASy TrEMBL
Match: A0A6J1HCM0 (protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111462763 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEME+AIEELKMGMLRV
Sbjct: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMESAIEELKMGMLRV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           ADRADLLRGSTVMTVVEILNSDQMVRVL AVVGFQLRIRRWGLQRD
Sbjct: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLAAVVGFQLRIRRWGLQRD 226

[Close]

BLAST of Carg08258 vs. ExPASy TrEMBL
Match: A0A6J1KAY7 (protein DOG1-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111492218 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD
Sbjct: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR
Sbjct: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVD EICEME+AIE+LKMGML V
Sbjct: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDREICEMESAIEDLKMGMLGV 180

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           AD+ADLLRGSTVMTVVE LNSDQMVRVL AVVGFQLR+RRWGLQRD
Sbjct: 181 ADKADLLRGSTVMTVVECLNSDQMVRVLAAVVGFQLRVRRWGLQRD 226

[Close]

BLAST of Carg08258 vs. ExPASy TrEMBL
Match: A0A6J1BV60 (protein DOG1-like 4 OS=Momordica charantia OX=3673 GN=LOC111005009 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 8.3e-75
Identity = 150/223 (67.26%), Postives = 180/223 (80.72%), Query Frame = 0


Query: 4   PQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYDELS 63
           P PV+ NF NF++SWL+ QQSFLQQLL SAAL +NDKE+AQLRLI Q+LAHYQ YY+ELS
Sbjct: 5   PHPVIDNFGNFYQSWLAGQQSFLQQLLQSAALPANDKEEAQLRLINQILAHYQHYYEELS 64

Query: 64  KAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEV 123
           KAA ED+F+  SAPWLT FERT LWI GFKPS+++RLL AAV DL P Q ARL EV+AEV
Sbjct: 65  KAAGEDVFRAFSAPWLTPFERTLLWIGGFKPSIVLRLLDAAVKDLAPPQRARLEEVKAEV 124

Query: 124 KWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVADR 183
           +  ER+LT+AMASLQE +AAPP+  LARR  AGR++D EICEME AIEELK  M+ V +R
Sbjct: 125 RRNERDLTEAMASLQEMVAAPPIEALARR--AGRVMDREICEMEGAIEELKTAMVMVLNR 184

Query: 184 ADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
           AD +RGS VM V+E+L+ DQ VR+L A   FQLRIRRWG+ R+
Sbjct: 185 ADGVRGSAVMKVMELLDPDQRVRLLAAAAEFQLRIRRWGVHRE 225

[Close]

BLAST of Carg08258 vs. ExPASy TrEMBL
Match: A0A5A7VGN9 (Transcription factor HBP-1b(C38) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003940 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.5e-71
Identity = 146/224 (65.18%), Postives = 183/224 (81.70%), Query Frame = 0


Query: 3   HPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYDEL 62
           H   V+ NF +F+ESWL+TQ+S L+QLL  + + ++ KE+ QL LI QVLAHYQ Y++E+
Sbjct: 10  HSVSVIENFADFYESWLTTQRSLLEQLLHVSQI-TDYKEERQLGLIKQVLAHYQLYHEEI 69

Query: 63  SKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAE 122
           SKA +ED+F+  SAPWLTS+ERT LWISGFKPS++ RL+  AV DLTPAQ+A L E++A+
Sbjct: 70  SKAVSEDVFRAFSAPWLTSYERTLLWISGFKPSIVFRLVDCAVKDLTPAQAASLEELKAD 129

Query: 123 VKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVAD 182
           VK KER+LT+AMASLQET+AAPP++ LARR  AGRLVDGEICEMENAIEELK+GML V D
Sbjct: 130 VKRKERDLTEAMASLQETVAAPPLVGLARR--AGRLVDGEICEMENAIEELKIGMLGVFD 189

Query: 183 RADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
            ADLLRGST+  V+EIL +DQ +R+L A   FQ RIRRWG+QRD
Sbjct: 190 SADLLRGSTMKRVMEILKTDQTLRLLAAATEFQQRIRRWGIQRD 230

[Close]

BLAST of Carg08258 vs. ExPASy TrEMBL
Match: A0A6J1HE23 (protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111462712 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.7e-70
Identity = 143/226 (63.27%), Postives = 180/226 (79.65%), Query Frame = 0


Query: 1   MAHPQPVLPNFHNFHESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQVLAHYQQYYD 60
           MAH    + NF NF+E WL+ Q+ FL++LL    ++ ++ E+ QL +I QVLAHYQ Y++
Sbjct: 8   MAHSASAIENFGNFYEIWLTRQREFLKELLHVLQIEEHE-EEKQLGVINQVLAHYQNYHE 67

Query: 61  ELSKAAAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVR 120
           E+SKAA ED+F+V SAPWL+S+ERT LWISGFKPS++ RL+  AV DLT  Q  R+ E++
Sbjct: 68  EISKAAGEDVFRVFSAPWLSSYERTLLWISGFKPSIVFRLVDGAVKDLTAVQVIRVEELK 127

Query: 121 AEVKWKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRV 180
           AEV+ KER+LT+A+ASLQET+AAPP++ LARR  AGRLVDGEICEMENAIEELK+GML V
Sbjct: 128 AEVRRKERDLTEALASLQETVAAPPIVGLARR--AGRLVDGEICEMENAIEELKIGMLGV 187

Query: 181 ADRADLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGLQRD 227
            D ADLLRGST+  V+EIL +DQ VR+L A   FQLRIRRWGLQRD
Sbjct: 188 FDSADLLRGSTMKRVMEILRTDQTVRLLAAATEFQLRIRRWGLQRD 230

[Close]

BLAST of Carg08258 vs. TAIR 10
Match: AT1G58330.1 (transcription factor-related )

HSP 1 Score: 148.3 bits (373), Expect = 7.5e-36
Identity = 88/219 (40.18%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 11  FHNFHESWLSTQQSFLQQ---LLDSAALQSNDKEDAQLRLIAQVLAHYQQYYDELSKA-- 70
           F +F   WL   + F+QQ   L D   + +  +E++   L++  L+HY QYY+E S A  
Sbjct: 10  FASFFNDWLCRHRQFVQQLAHLADETTIVTPIEEES---LVSNFLSHYLQYYEEKSVAMS 69

Query: 71  -AAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVK 130
            A +DI+   S PWL+S+E+  LWI GFKP ++ +L+  +VNDLT  Q  +L  +R E K
Sbjct: 70  VAGDDIYDFFSPPWLSSYEKLILWIGGFKPGMVFKLITTSVNDLTSHQIDQLESIRLETK 129

Query: 131 WKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVADRA 190
            +ER+L    A LQ+++  P ++   RR+G  RL +GE  EME+A+E LK+ M++    A
Sbjct: 130 RRERDLMRRFALLQQSVGDPLLMVPFRRIGVLRLGEGEQPEMEDAMEVLKVEMIKAMKNA 189

Query: 191 DLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIRRWGL 224
           D LR  TV  VVE+LN  Q +++L A   F LR+R  G+
Sbjct: 190 DQLRCVTVGKVVEVLNPRQSIKLLRAAGEFYLRLRDLGV 225

[Close]

BLAST of Carg08258 vs. TAIR 10
Match: AT1G09950.1 (RESPONSE TO ABA AND SALT 1 )

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 82/215 (38.14%), Postives = 128/215 (59.53%), Query Frame = 0


Query: 10  NFHNFHESWLSTQQSFLQQLLDSAALQSNDK--EDAQLRLIAQVLAHYQQYYDELSKA-- 69
           +F  F + WL   + F++QL+ +++L   ++   + Q  L+AQ L+H  QYY E   +  
Sbjct: 9   SFTIFVDGWLIRHRYFVEQLMCASSLDETNRISLEEQQSLVAQFLSHCLQYYQEKFASVS 68

Query: 70  -AAEDIFQVLSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVK 129
            A +++F     PW  S+ +  LW+  FKPSL+ +L   +V DLT  Q  R++ +++E +
Sbjct: 69  LAGDNVFTFFCPPWFNSYAKLILWVGDFKPSLVFKLTEVSVADLTRHQKDRISSLKSETR 128

Query: 130 WKERELTDAMASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVADRA 189
            KERE+    A +Q+++A PP++  ARRVGA  +VDGE  ++E A+E LK GM    + A
Sbjct: 129 RKEREVMRDFALVQQSVADPPVMLAARRVGAVGMVDGEETDLEEAMEVLKAGMAAAMNNA 188

Query: 190 DLLRGSTVMTVVEILNSDQMVRVLVAVVGFQLRIR 220
           D LR STV  VVEIL   Q ++VL  +    LR+R
Sbjct: 189 DQLRCSTVGKVVEILTPPQAIKVLRTIGQLHLRLR 223

[Close]

BLAST of Carg08258 vs. TAIR 10
Match: AT5G06960.1 (OCS-element binding factor 5 )

HSP 1 Score: 85.1 bits (209), Expect = 7.8e-17
Identity = 63/212 (29.72%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 15  HESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQ-VLAHYQQYYDELSKAAAEDIFQV 74
           +  W   +   +++L  S+A+ S+   D++LR+I   V+AHY++ Y     AA  D+F +
Sbjct: 118 YRRWQEDKNRQMKEL--SSAIDSH-ATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHL 177

Query: 75  LSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDA 134
           LS  W T  ER FLW+ GF+ S L++L+ + +  LT  QS  +N ++   +  E  L+  
Sbjct: 178 LSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQG 237

Query: 135 MASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVAD------RADLL 194
           M +LQ++        LA  + +G L       + + + ++ M M ++        +AD L
Sbjct: 238 MDNLQQS--------LADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNL 297

Query: 195 RGSTVMTVVEILNSDQMVRVLVAVVGFQLRIR 220
           R  T   +V +L + Q  R L+AV  + LR+R
Sbjct: 298 RLQTYQQMVRLLTTRQSARALLAVHNYTLRLR 318

[Close]

BLAST of Carg08258 vs. TAIR 10
Match: AT5G06960.2 (OCS-element binding factor 5 )

HSP 1 Score: 85.1 bits (209), Expect = 7.8e-17
Identity = 63/212 (29.72%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 15  HESWLSTQQSFLQQLLDSAALQSNDKEDAQLRLIAQ-VLAHYQQYYDELSKAAAEDIFQV 74
           +  W   +   +++L  S+A+ S+   D++LR+I   V+AHY++ Y     AA  D+F +
Sbjct: 118 YRRWQEDKNRQMKEL--SSAIDSH-ATDSELRIIVDGVIAHYEELYRIKGNAAKSDVFHL 177

Query: 75  LSAPWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDA 134
           LS  W T  ER FLW+ GF+ S L++L+ + +  LT  QS  +N ++   +  E  L+  
Sbjct: 178 LSGMWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQG 237

Query: 135 MASLQETIAAPPMLELARRVGAGRLVDGEICEMENAIEELKMGMLRVAD------RADLL 194
           M +LQ++        LA  + +G L       + + + ++ M M ++        +AD L
Sbjct: 238 MDNLQQS--------LADTLSSGTLGSSSSGNVASYMGQMAMAMGKLGTLEGFIRQADNL 297

Query: 195 RGSTVMTVVEILNSDQMVRVLVAVVGFQLRIR 220
           R  T   +V +L + Q  R L+AV  + LR+R
Sbjct: 298 RLQTYQQMVRLLTTRQSARALLAVHNYTLRLR 318

[Close]

BLAST of Carg08258 vs. TAIR 10
Match: AT5G10030.1 (TGACG motif-binding factor 4 )

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-16
Identity = 67/204 (32.84%), Postives = 103/204 (50.49%), Query Frame = 0


Query: 18  WLSTQQSFLQQLLDSAALQSNDKEDAQLR-LIAQVLAHYQQYYDELSKAAAEDIFQVLSA 77
           W+  Q    +Q+ +   +      D +LR L+   + HY Q +   S AA  D+F V+S 
Sbjct: 159 WVEEQN---RQICELRTVLHGQVSDIELRSLVENAMKHYFQLFRMKSAAAKIDVFYVMSG 218

Query: 78  PWLTSFERTFLWISGFKPSLLIRLLFAAVNDLTPAQSARLNEVRAEVKWKERELTDAMAS 137
            W TS ER FLWI GF+PS L+++L    + LT  Q   +  +R   +  E  L+  M  
Sbjct: 219 MWKTSAERFFLWIGGFRPSELLKVLLPHFDPLTDQQLLDVCNLRQSCQQAEDALSQGMEK 278

Query: 138 LQETIAAPPMLELARRVGAGRLVDGE-ICEMENAIEELKMGMLRVADRADLLRGSTVMTV 197
           LQ T        LA  V AG+L +G  I +M  A+E L+  ++   ++AD LR  T+  +
Sbjct: 279 LQHT--------LAESVAAGKLGEGSYIPQMTCAMERLE-ALVSFVNQADHLRHETLQQM 338

Query: 198 VEILNSDQMVRVLVAVVGFQLRIR 220
             IL + Q  R L+A+  +  R+R
Sbjct: 339 HRILTTRQAARGLLALGEYFQRLR 350

The following BLAST results are available for this feature:

BLAST of Carg08258 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029696.1	1.9e-118	100.00	Protein DOG1-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6598755.1	7.4e-118	99.56	Protein ZW2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962261.1	2.1e-117	99.12	protein DOG1-like 4 [Cucurbita moschata]	[more]
XP_023547060.1	8.1e-117	98.67	protein DOG1-like 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022997259.1	2.9e-114	96.46	protein DOG1-like 4 [Cucurbita maxima]	[more]

BLAST of Carg08258 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLV1	1.1e-34	40.18	Protein ZW2 OS=Arabidopsis thaliana OX=3702 GN=ZW2 PE=2 SV=1	[more]
O04515	4.9e-32	38.14	Protein RESPONSE TO ABA AND SALT 1 OS=Arabidopsis thaliana OX=3702 GN=RAS1 PE=2 ...	[more]
Q39163	1.1e-15	29.72	Transcription factor TGA5 OS=Arabidopsis thaliana OX=3702 GN=TGA5 PE=1 SV=2	[more]
Q39162	1.4e-15	32.84	Transcription factor TGA4 OS=Arabidopsis thaliana OX=3702 GN=TGA4 PE=1 SV=2	[more]
P43273	5.5e-15	28.30	Transcription factor TGA2 OS=Arabidopsis thaliana OX=3702 GN=TGA2 PE=1 SV=1	[more]

BLAST of Carg08258 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCM0	1.0e-117	99.12	protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111462763 PE=4 SV=1	[more]
A0A6J1KAY7	1.4e-114	96.46	protein DOG1-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111492218 PE=4 SV=1	[more]
A0A6J1BV60	8.3e-75	67.26	protein DOG1-like 4 OS=Momordica charantia OX=3673 GN=LOC111005009 PE=4 SV=1	[more]
A0A5A7VGN9	1.5e-71	65.18	Transcription factor HBP-1b(C38) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A6J1HE23	4.7e-70	63.27	protein DOG1-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111462712 PE=4 SV=1	[more]

BLAST of Carg08258 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58330.1	7.5e-36	40.18	transcription factor-related	[more]
AT1G09950.1	3.5e-33	38.14	RESPONSE TO ABA AND SALT 1	[more]
AT5G06960.1	7.8e-17	29.72	OCS-element binding factor 5	[more]
AT5G06960.2	7.8e-17	29.72	OCS-element binding factor 5	[more]
AT5G10030.1	1.0e-16	32.84	TGACG motif-binding factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025422	Transcription factor TGA like domain	PFAM	PF14144	DOG1	coord: 33..102 e-value: 1.8E-23 score: 82.5
IPR025422	Transcription factor TGA like domain	PROSITE	PS51806	DOG1	coord: 8..226 score: 30.931841
None	No IPR available	PANTHER	PTHR46354	FAMILY NOT NAMED	coord: 7..226
None	No IPR available	PANTHER	PTHR46354:SF1	TRANSCRIPTION FACTOR HBP-1B	coord: 7..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08258-RA	Carg08258-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding