Carg07541 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg07541
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	15.4 kDa class V heat shock protein
Location	Carg_Chr13: 7715624 .. 7716684 (-)
RNA-Seq Expression	Carg07541
Synteny	Carg07541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCACTTCTGGTCTCATTGGGCCCGCCGAGAGCCCGCGAAACAGAAATCTTCGTTCCCAAAGCTATCAACAATGGAGATTTCAACTTCTCATCCTGCTTCCCTGCACAACTCACTATCTCCTCGTCTCCTCTTTCCTTACTACCATTACGCCGTTCCTCAGAACTACGTGCACTGGGCTCAAACATCCGAGTCTCACGTTTTCTCGGCCGATCTGCCTGGTGCTTCCTCCGATTTGTCCGATTCCTTTCTTGCTGTAGGTTTCTCGTGCCGTTATTTGAATTTCTGAATCGTTTTTTGATTTGTGAATTTGATGCGTAGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTGGAAGATTCGCGATACCTAATTATTCGAACGCAGGCTGTGGATGGAGTTACGGTGCCTGCGAAGAGCTTCTCGAGGAAGTTTCGGCTTCCGGTTTTGGTCGATGTGGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTGCCTAGGTCTTTAAGGACACGCTCTGTCATTCACCAGACTGATTCTTCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGATTTGATCGGCATTCGAAACTCGAACGATTGACGATTTCGATTCCAAGTTTGCTGGTTCTGCCTTCTCTTTTCCTTTCGTTGGAAGTTCGATTAATTTCTCACGAGCAGGAAAAAAAAAACGTTTCGATATCGACATATTGTTAGATTTAGAATCTGTGATTGGAGACGATTGATCCCAATGAATTAGATTCATCGAAGTTACAAAGGATTATGTTACCTTCTAAAATGCCATTGAGGTGATGAAACGCGTCTTTGGGATCATTCATACGGGAAAATTAAGAAATTATTCGCCGTCTGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGACGGCTCTGAACTTTGGCTTGATAAATTTCTTCAAACTCATAAAGAATTACGTTACTTTATGAACCTGGCATTGAAGTGATGAAACGCGTCTTTGGTATCATTCATACGGGAAAATTAAG

mRNA sequence

ATCCACTTCTGGTCTCATTGGGCCCGCCGAGAGCCCGCGAAACAGAAATCTTCGTTCCCAAAGCTATCAACAATGGAGATTTCAACTTCTCATCCTGCTTCCCTGCACAACTCACTATCTCCTCGTCTCCTCTTTCCTTACTACCATTACGCCGTTCCTCAGAACTACGTGCACTGGGCTCAAACATCCGAGTCTCACGTTTTCTCGGCCGATCTGCCTGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTGGAAGATTCGCGATACCTAATTATTCGAACGCAGGCTGTGGATGGAGTTACGGTGCCTGCGAAGAGCTTCTCGAGGAAGTTTCGGCTTCCGGTTTTGGTCGATGTGGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTGCCTAGGTCTTTAAGGACACGCTCTGTCATTCACCAGACTGATTCTTCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGATTTGATCGGCATTCGAAACTCGAACGATTGACGATTTCGATTCCAAGTTTGCTGGTTCTGCCTTCTCTTTTCCTTTCGTTGGAAGTTCGATTAATTTCTCACGAGCAGGAAAAAAAAAACGTTTCGATATCGACATATTGTTAGATTTAGAATCTGTGATTGGAGACGATTGATCCCAATGAATTAGATTCATCGAAGTTACAAAGGATTATGTTACCTTCTAAAATGCCATTGAGGTGATGAAACGCGTCTTTGGGATCATTCATACGGGAAAATTAAGAAATTATTCGCCGTCTGTGGGGATCGAACCCACGACCACGTGGTTAAAAGCCACGCGCTCTACCACTGAGCTAAGACGGCTCTGAACTTTGGCTTGATAAATTTCTTCAAACTCATAAAGAATTACGTTACTTTATGAACCTGGCATTGAAGTGATGAAACGCGTCTTTGGTATCATTCATACGGGAAAATTAAG

Coding sequence (CDS)

ATGGAGATTTCAACTTCTCATCCTGCTTCCCTGCACAACTCACTATCTCCTCGTCTCCTCTTTCCTTACTACCATTACGCCGTTCCTCAGAACTACGTGCACTGGGCTCAAACATCCGAGTCTCACGTTTTCTCGGCCGATCTGCCTGGTGTTCGGAAGGAGGAGATAAAAGTGGAGGTGGAAGATTCGCGATACCTAATTATTCGAACGCAGGCTGTGGATGGAGTTACGGTGCCTGCGAAGAGCTTCTCGAGGAAGTTTCGGCTTCCGGTTTTGGTCGATGTGGATGCGATTTCGGCTGGATTTGAGAATGGAGTTTTGGAGATTACGGTGCCTAGGTCTTTAAGGACACGCTCTGTCATTCACCAGACTGATTCTTCTGATCAACTTCAACTTCTTGCTAGGGCTGCTTGA

Protein sequence

MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSVIHQTDSSDQLQLLARAA

Homology

[Close]

BLAST of Carg07541 vs. NCBI nr
Match: XP_022933175.1 (15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kDa class V heat shock protein [Cucurbita pepo subsp. pepo] >KAG6584081.1 15.4 kDa class V heat shock protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019683.1 15.4 kDa class V heat shock protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IHQTDSSDQLQLLARAA
Sbjct: 121 IHQTDSSDQLQLLARAA 137

[Close]

BLAST of Carg07541 vs. NCBI nr
Match: XP_023001317.1 (15.4 kDa class V heat shock protein [Cucurbita maxima])

HSP 1 Score: 256.9 bits (655), Expect = 9.8e-65
Identity = 133/137 (97.08%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTSH ASLHNSL PRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS RTRSV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRTRSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IHQTDS DQLQLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

[Close]

BLAST of Carg07541 vs. NCBI nr
Match: XP_038894889.1 (15.4 kDa class V heat shock protein [Benincasa hispida])

HSP 1 Score: 230.7 bits (587), Expect = 7.5e-57
Identity = 116/137 (84.67%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTS+P+SLHNS  PRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHNSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVL+DVD ISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLIDVDGISAGFENGVLEITVPRSFRRSSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IH   S DQLQLLARAA
Sbjct: 121 IH---SPDQLQLLARAA 134

[Close]

BLAST of Carg07541 vs. NCBI nr
Match: ADU55781.1 (HSP15 [Citrullus lanatus])

HSP 1 Score: 223.8 bits (569), Expect = 9.2e-55
Identity = 114/137 (83.21%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTS+P+SLH S  PRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IH  D     QLLARAA
Sbjct: 121 IHSPD-----QLLARAA 132

[Close]

BLAST of Carg07541 vs. NCBI nr
Match: XP_022140087.1 (15.4 kDa class V heat shock protein [Momordica charantia])

HSP 1 Score: 211.8 bits (538), Expect = 3.6e-51
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEI  S+  SL N   P LL+PYYHYA+PQNYVHW QT +SH+FSADLPGVRKEEIKVEV
Sbjct: 26  MEI--SNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEV 85

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRT+AVDGV   AKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 86  EDSRYLIIRTEAVDGVEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASV 145

Query: 121 IHQTDSSDQLQLLARAA 138
           I  TDS DQLQLLARAA
Sbjct: 146 ILPTDSPDQLQLLARAA 160

[Close]

BLAST of Carg07541 vs. ExPASy Swiss-Prot
Match: O49710 (15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.2e-27
Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 30  QNYVHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQA--VDGVTVPAKSFSRKF 89
           +N+V W+Q+ +SH FS DLPG+RKEEIKVE+EDS YLIIRT+A  +     P K+F RKF
Sbjct: 25  ENHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKF 84

Query: 90  RLPVLVDVDAISAGFENGVLEITVPRSLRTRSVIHQTDSSDQLQLLARAA 138
           RLP  +D+  ISAG+E+GVL + VP+ + TR +I  +D  + LQLLARAA
Sbjct: 85  RLPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of Carg07541 vs. ExPASy Swiss-Prot
Match: Q7EZ57 (18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.8 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.5e-20
Identity = 51/95 (53.68%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 31  NYVHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQAVDGVTVPA------KSFS 90
           ++V W +T+ +H++SA LPGVRKEEI+VEVED+ YL+IRT+  DG           +SF+
Sbjct: 55  SHVSWEETAAAHLYSASLPGVRKEEIRVEVEDAMYLVIRTELDDGGDGDGGGGGGRRSFA 114

Query: 91  RKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRS 120
           RKFRLP +VD D ISA + +GVL +TVPR L TR+
Sbjct: 115 RKFRLPAMVDADGISAEYTHGVLRVTVPR-LHTRA 148

[Close]

BLAST of Carg07541 vs. ExPASy Swiss-Prot
Match: P27777 (16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9A PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-15
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 33  VHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQAV----------DGVTVPAKS 92
           + W +T ESHVF ADLPGV+KEE+KVEVE+   L+I  Q              V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 93  FSRKFRLPVLVDVDAISAGFENGVLEITVPRS 115
           F R+FRLP    VD + AG ENGVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGLENGVLTVTVPKA 136

[Close]

BLAST of Carg07541 vs. ExPASy Swiss-Prot
Match: Q943E6 (16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HSP16.9B PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-15
Identity = 43/92 (46.74%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 33  VHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQAV----------DGVTVPAKS 92
           + W +T ESHVF ADLPGV+KEE+KVEVE+   L+I  Q              V   +  
Sbjct: 45  IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQ 104

Query: 93  FSRKFRLPVLVDVDAISAGFENGVLEITVPRS 115
           F R+FRLP    VD + AG ENGVL +TVP++
Sbjct: 105 FMRRFRLPENAKVDQVKAGMENGVLTVTVPKA 136

[Close]

BLAST of Carg07541 vs. ExPASy Swiss-Prot
Match: Q05832 (18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.6e-15
Identity = 44/92 (47.83%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 33  VHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQAV----------DGVTVPAKS 92
           + W +T E+HVF ADLPGV+KEE+KVEVED   L I  Q              V   +  
Sbjct: 57  IDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQ 116

Query: 93  FSRKFRLPVLVDVDAISAGFENGVLEITVPRS 115
           F RKFRLP    VD + AG ENGVL +TVP++
Sbjct: 117 FMRKFRLPENAKVDQVKAGMENGVLTVTVPKN 148

[Close]

BLAST of Carg07541 vs. ExPASy TrEMBL
Match: A0A6J1F477 (15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC111440034 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 7.0e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IHQTDSSDQLQLLARAA
Sbjct: 121 IHQTDSSDQLQLLARAA 137

[Close]

BLAST of Carg07541 vs. ExPASy TrEMBL
Match: A0A6J1KG72 (15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.7e-65
Identity = 133/137 (97.08%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTSH ASLHNSL PRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSH-ASLHNSLPPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS RTRSV
Sbjct: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRTRSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IHQTDS DQLQLLARAA
Sbjct: 121 IHQTDSPDQLQLLARAA 136

[Close]

BLAST of Carg07541 vs. ExPASy TrEMBL
Match: H6TB34 (HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.4e-55
Identity = 114/137 (83.21%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTS+P+SLH S  PRLLFPY+HY +P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSNPSSLHYSFPPRLLFPYFHYTIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRT+AVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 61  EDSRYLIIRTEAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRSSV 120

Query: 121 IHQTDSSDQLQLLARAA 138
           IH  D     QLLARAA
Sbjct: 121 IHSPD-----QLLARAA 132

[Close]

BLAST of Carg07541 vs. ExPASy TrEMBL
Match: A0A6J1CFU3 (15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC111010826 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEI  S+  SL N   P LL+PYYHYA+PQNYVHW QT +SH+FSADLPGVRKEEIKVEV
Sbjct: 26  MEI--SNRPSLRNPFPPHLLYPYYHYAIPQNYVHWVQTPDSHIFSADLPGVRKEEIKVEV 85

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSV 120
           EDSRYLIIRT+AVDGV   AKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRS R  SV
Sbjct: 86  EDSRYLIIRTEAVDGVEELAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPRSFRRASV 145

Query: 121 IHQTDSSDQLQLLARAA 138
           I  TDS DQLQLLARAA
Sbjct: 146 ILPTDSPDQLQLLARAA 160

[Close]

BLAST of Carg07541 vs. ExPASy TrEMBL
Match: A0A0A0LUT8 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47
Identity = 108/138 (78.26%), Postives = 115/138 (83.33%), Query Frame = 0


Query: 1   MEISTSHPASLHNSLSPRLLFPYYHYAVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEV 60
           MEISTS P          LLFPYYHY++P NYVHW QTS+SH+FSADLPGVRKEEIKVEV
Sbjct: 1   MEISTSTPHP--------LLFPYYHYSIPHNYVHWVQTSDSHLFSADLPGVRKEEIKVEV 60

Query: 61  EDSRYLIIRTQAVDGVTVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR-SLRTRS 120
           EDSRYLIIRT+AV+GVT PAKSFSRKFRLPVLVDVD ISAGFENGVLEITVPR S R RS
Sbjct: 61  EDSRYLIIRTEAVNGVTSPAKSFSRKFRLPVLVDVDGISAGFENGVLEITVPRSSFRRRS 120

Query: 121 VIHQTDSSDQLQLLARAA 138
           V+H   S DQ QLLARAA
Sbjct: 121 VVH---SPDQHQLLARAA 127

[Close]

BLAST of Carg07541 vs. TAIR 10
Match: AT4G21870.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.6e-28
Identity = 62/110 (56.36%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 30  QNYVHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLIIRTQA--VDGVTVPAKSFSRKF 89
           +N+V W+Q+ +SH FS DLPG+RKEEIKVE+EDS YLIIRT+A  +     P K+F RKF
Sbjct: 25  ENHVRWSQSPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEATPMSPPDQPLKTFKRKF 84

Query: 90  RLPVLVDVDAISAGFENGVLEITVPRSLRTRSVIHQTDSSDQLQLLARAA 138
           RLP  +D+  ISAG+E+GVL + VP+ + TR +I  +D  + LQLLARAA
Sbjct: 85  RLPESIDMIGISAGYEDGVLTVIVPKRIMTRRLIDPSDVPESLQLLARAA 134

[Close]

BLAST of Carg07541 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 80.9 bits (198), Expect = 8.9e-16
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 27  AVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLII----------RTQAVDGV 86
           A+    V W +T+E+HVF ADLPG++KEE+KVE+ED   L I          +      V
Sbjct: 42  AIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 101

Query: 87  TVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR 114
              +  FSRKFRLP  V +D + A  ENGVL +TVP+
Sbjct: 102 ERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPK 138

[Close]

BLAST of Carg07541 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-15
Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 27  AVPQNYVHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLII----------RTQAVDGV 86
           A+    V W +T+E+HVF ADLPG++KEE+KVE+ED   L I          +      V
Sbjct: 44  AITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRV 103

Query: 87  TVPAKSFSRKFRLPVLVDVDAISAGFENGVLEITVPR 114
              +  FSRKF+LP  V +D + A  ENGVL +TVP+
Sbjct: 104 ERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPK 140

[Close]

BLAST of Carg07541 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 43/105 (40.95%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 33  VHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLII----------RTQAVDGVTVPAKS 92
           V W +T E+HVF ADLPG+RKEE+KVEVED   L I          +      V   +  
Sbjct: 52  VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGK 111

Query: 93  FSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSVIHQTDSS 128
           F+R+FRLP    ++ I A  ENGVL +TVP+    +  +   D S
Sbjct: 112 FTRRFRLPENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

[Close]

BLAST of Carg07541 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 33  VHWAQTSESHVFSADLPGVRKEEIKVEVEDSRYLII----------RTQAVDGVTVPAKS 92
           V W +T E+HVF AD+PG++KEE+KVEVED   L I          ++     V   +  
Sbjct: 51  VDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGK 110

Query: 93  FSRKFRLPVLVDVDAISAGFENGVLEITVPRSLRTRSVIHQTDSS 128
           F R+FRLP    V+ + A  ENGVL +TVP+   ++  +   D S
Sbjct: 111 FMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155

The following BLAST results are available for this feature:

BLAST of Carg07541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933175.1	1.5e-68	100.00	15.4 kDa class V heat shock protein [Cucurbita moschata] >XP_023518998.1 15.4 kD...	[more]
XP_023001317.1	9.8e-65	97.08	15.4 kDa class V heat shock protein [Cucurbita maxima]	[more]
XP_038894889.1	7.5e-57	84.67	15.4 kDa class V heat shock protein [Benincasa hispida]	[more]
ADU55781.1	9.2e-55	83.21	HSP15 [Citrullus lanatus]	[more]
XP_022140087.1	3.6e-51	81.02	15.4 kDa class V heat shock protein [Momordica charantia]	[more]

BLAST of Carg07541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49710	2.2e-27	56.36	15.4 kDa class V heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP15.4 P...	[more]
Q7EZ57	4.5e-20	53.68	18.8 kDa class V heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P27777	5.6e-15	46.74	16.9 kDa class I heat shock protein 1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q943E6	5.6e-15	46.74	16.9 kDa class I heat shock protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q05832	5.6e-15	47.83	18.3 kDa class I heat shock protein OS=Oxybasis rubra OX=3560 GN=HSP18 PE=2 SV=1	[more]

BLAST of Carg07541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F477	7.0e-69	100.00	15.4 kDa class V heat shock protein OS=Cucurbita moschata OX=3662 GN=LOC11144003...	[more]
A0A6J1KG72	4.7e-65	97.08	15.4 kDa class V heat shock protein OS=Cucurbita maxima OX=3661 GN=LOC111495481 ...	[more]
H6TB34	4.4e-55	83.21	HSP15 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1CFU3	1.7e-51	81.02	15.4 kDa class V heat shock protein OS=Momordica charantia OX=3673 GN=LOC1110108...	[more]
A0A0A0LUT8	1.2e-47	78.26	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G063560 PE=3 S...	[more]

BLAST of Carg07541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21870.1	1.6e-28	56.36	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	8.9e-16	44.33	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	2.0e-15	43.30	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.3e-14	40.95	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.3e-14	39.05	heat shock protein 17.4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 18..132 e-value: 1.3E-22 score: 81.8
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 17..115
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 35..117 e-value: 1.5E-15 score: 57.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 22..129 score: 19.606552
None	No IPR available	PANTHER	PTHR11527:SF97	15.4 KDA CLASS V HEAT SHOCK PROTEIN	coord: 1..136
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07541-RA	Carg07541-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding