Carg07324 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTTACTTGGGGCGAAAATGCAGATGAGCTTCGTTCTCGGCGTTGGACTTGCTGTGATTGTTGCAGTGATTATGTACTTCGGAGCTGGAATCTTCTCCGGAGATGTAACTGTGCAAGCCCTCATCCACCTCGGAGTGCCGGTATTAACCTTTTAAATATATTTATATCAACTTGAGCATAATTCAATTTATAAATCATATATTTTAAAATATATACGAGATTTATATACCCGACCTTATTCGTTTAGCTCTAAAATAAAGTCTCGAATTTGAACTAACTATTTTTCTTGTCTCAATCTCTCGTAGTTTGTGGCCGCCACACAGCCAATGAACTCCTTAGCATTCGTATTTGACGGAGTCAACTTTGGAGCTTCTGATTTTGCTTACTCTGCCTACTCTTTGGCATGTGCTCTCTTTTCTAGTCAACTACGTTCCGTTCTCAAATCGAAAAATTATTCAATAAGACTGTTACAACGCTGTTACATTTATCCTTAATAATCACGAGATTCATATTTAAAATATTTTTATAATTTATATCTCGTGCTAATAATCCATATTTGTTTCTATCCATAGACTTTGGTTTCCATTGCTACCATTCTCTCTCTCTTCCTTCTCTCCAAAAGCTATGGTTTCCTCGGGATTTGGACTGCTTTGGCCATCTACATGGCCCTTCGTACTCTCGTAGGATTGTTGAGGTATCTTTTATTCTCGAGATGATCGGTTCTTAATTTTTTTAAGATGAAATCGTGAATTAAAACATATTTTGGATTATTATGTTTTTTACGTGCTTTTATTGAGTACTAATTGTTTTAATGATAACTACAGTTGAATTCCCTAATTCAACTGTTAAAAAAATTGTTGGAATTGAGTCTCTAAATATTTTAAACGATTTATCTGATGGTTGTAGGATGGGAAGTGGAACAGGACCCTGGCGTTACCTAAGAGGGTCGTTGTTGCCCTAATTACGACGTTCTTACATCAGAAAAGAAAGTTATATCGGCGAAGCTTTATAACAACGATAATCTTGTCGGGTTTTTTTTTAAATGTTGTTATTATTATTATTGTTATTTTCTATAGTACAAAGTTGGGGAAGAGCTTCTTTCATACAACATATGTTATTGTTATAGA ATGAATTTACTTGGGGCGAAAATGCAGATGAGCTTCGTTCTCGGCGTTGGACTTGCTGTGATTGTTGCAGTGATTATGTACTTCGGAGCTGGAATCTTCTCCGGAGATGTAACTGTGCAAGCCCTCATCCACCTCGGAGTGCCGACTTTGGTTTCCATTGCTACCATTCTCTCTCTCTTCCTTCTCTCCAAAAGCTATGGTTTCCTCGGGATTTGGACTGCTTTGGCCATCTACATGGCCCTTCGTACTCTCGTAGGATTGTTGAGGATGGGAAGTGGAACAGGACCCTGGCGTTACCTAAGAGGGTCGTTGTTGCCCTAATTACGACGTTCTTACATCAGAAAAGAAAGTTATATCGGCGAAGCTTTATAACAACGATAATCTTGTCGGGTTTTTTTTTAAATGTTGTTATTATTATTATTGTTATTTTCTATAGTACAAAGTTGGGGAAGAGCTTCTTTCATACAACATATGTTATTGTTATAGA ATGAATTTACTTGGGGCGAAAATGCAGATGAGCTTCGTTCTCGGCGTTGGACTTGCTGTGATTGTTGCAGTGATTATGTACTTCGGAGCTGGAATCTTCTCCGGAGATGTAACTGTGCAAGCCCTCATCCACCTCGGAGTGCCGACTTTGGTTTCCATTGCTACCATTCTCTCTCTCTTCCTTCTCTCCAAAAGCTATGGTTTCCTCGGGATTTGGACTGCTTTGGCCATCTACATGGCCCTTCGTACTCTCGTAGGATTGTTGAGGATGGGAAGTGGAACAGGACCCTGGCGTTACCTAAGAGGGTCGTTGTTGCCCTAA MNLLGAKMQMSFVLGVGLAVIVAVIMYFGAGIFSGDVTVQALIHLGVPTLVSIATILSLFLLSKSYGFLGIWTALAIYMALRTLVGLLRMGSGTGPWRYLRGSLLP Homology
BLAST of Carg07324 vs. NCBI nr
Match: KAG7036585.1 (Protein DETOXIFICATION 43, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: KAG6606877.1 (Protein DETOXIFICATION 43, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.5 bits (415), Expect = 5.1e-37 Identity = 97/131 (74.05%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: XP_023523461.1 (protein DETOXIFICATION 43-like [Cucurbita pepo subsp. pepo] >XP_023523462.1 protein DETOXIFICATION 43-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.5 bits (415), Expect = 5.1e-37 Identity = 97/131 (74.05%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: XP_022948300.1 (protein DETOXIFICATION 43-like [Cucurbita moschata]) HSP 1 Score: 164.5 bits (415), Expect = 5.1e-37 Identity = 97/131 (74.05%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Carg07324 vs. NCBI nr
Match: XP_022998417.1 (protein DETOXIFICATION 43-like [Cucurbita maxima]) HSP 1 Score: 158.7 bits (400), Expect = 2.8e-35 Identity = 94/131 (71.76%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy Swiss-Prot
Match: Q9SFB0 (Protein DETOXIFICATION 43 OS=Arabidopsis thaliana OX=3702 GN=DTX43 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.7e-16 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy Swiss-Prot
Match: Q9SYD6 (Protein DETOXIFICATION 42 OS=Arabidopsis thaliana OX=3702 GN=DTX42 PE=2 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 5.9e-12 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy Swiss-Prot
Match: Q84K71 (Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 9.1e-05 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy TrEMBL
Match: A0A6J1G9F7 (Protein DETOXIFICATION OS=Cucurbita moschata OX=3662 GN=LOC111452015 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.5e-37 Identity = 97/131 (74.05%), Postives = 99/131 (75.57%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy TrEMBL
Match: A0A6J1K7Y7 (Protein DETOXIFICATION OS=Cucurbita maxima OX=3661 GN=LOC111493054 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.4e-35 Identity = 94/131 (71.76%), Postives = 97/131 (74.05%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy TrEMBL
Match: A0A6J1DGM6 (Protein DETOXIFICATION OS=Momordica charantia OX=3673 GN=LOC111020311 PE=3 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.6e-34 Identity = 90/131 (68.70%), Postives = 96/131 (73.28%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy TrEMBL
Match: A0A0A0LEV2 (Protein DETOXIFICATION OS=Cucumis sativus OX=3659 GN=Csa_3G696860 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.7e-33 Identity = 89/134 (66.42%), Postives = 94/134 (70.15%), Query Frame = 0
BLAST of Carg07324 vs. ExPASy TrEMBL
Match: A0A1S3CG02 (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103500313 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 7.0e-32 Identity = 86/131 (65.65%), Postives = 92/131 (70.23%), Query Frame = 0
BLAST of Carg07324 vs. TAIR 10
Match: AT3G08040.1 (MATE efflux family protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.8e-17 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Carg07324 vs. TAIR 10
Match: AT3G08040.2 (MATE efflux family protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.8e-17 Identity = 50/127 (39.37%), Postives = 72/127 (56.69%), Query Frame = 0
BLAST of Carg07324 vs. TAIR 10
Match: AT1G51340.2 (MATE efflux family protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.2e-13 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of Carg07324 vs. TAIR 10
Match: AT1G51340.1 (MATE efflux family protein ) HSP 1 Score: 71.6 bits (174), Expect = 4.2e-13 Identity = 46/126 (36.51%), Postives = 66/126 (52.38%), Query Frame = 0
BLAST of Carg07324 vs. TAIR 10
Match: AT2G38330.1 (MATE efflux family protein ) HSP 1 Score: 47.8 bits (112), Expect = 6.5e-06 Identity = 24/54 (44.44%), Postives = 37/54 (68.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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