Carg07248 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGTTACCCCTAAAATTTTATTACATTATTTATCTCTCGCCCATTTGCTTTCTAGAGAGAGAAAGATAGTGAGAGAAGTTCCTGTTCTTGTGAATGTGTGAAGAATTCCCATGTGAAGAGGGAGAGAATCCTTGAACCCAATTTGTATCTAAAAAAGCAAAAGATTGAGCACAAAAGCAAGGGAGAAGGAAGGAACATGGAAGATAGAGCAGAGAACAAGCTTCATAACGCATTGTTTATCCTTCTTCCATCTCATTTAGATTCTCTTCTCCTTTCCCCTCTCATGTAGCGCTCGAACTAGATCCCATTGCTATCTCCTCCGTTTTTCCTCTTCTGTAAGTATGTTCTTCCTCGAATCTCTTCATGGATTGCTTCTTTTGTTCTTATCTTATCAGATTTTATTTTGATTTTATAGTTGAAATTGTTGGATTCGTTGTTGTTTCTGTTTATAGGATCTGGATTTTGCGTGAATTGAATTTATTTCAACTTTTTAGGGCTGAAGTTACTCTGTGAAACTTGGATTTGGTTTTGGATTAGACTGTTCTGTTTTGGCCTGTTGAGTTGTGTGTTGATTCTTGTTAACTTCATGAATTTGAGTTGATTCGTAATTGAAGCTTTTCTAGTACGAGAAACTACACTGGAGATGATCTTGTTCCCTAATTTTTTTTCTTCTTGTTCTTGAAGATGAAAGTTGAACTGGACCTGCCTATGTGTGTTTTTGAATTGAACTTAAGAAAAAGGAGCTTGGAACCTCTAGGTTGAAACCTTAATAACTTAATATTAAGGTCATCCACTTAGTTCCTTCAATCTGCAGGGTTTTCTTGTGATTCTAGATAATTTGCTCTCGTTTTAACTTAGTTACGTTGTTTGATTAGTTTTGAGTTACCGGTCCTCTCGTACTAGGGAAAGGTCCTCTCCATGCTCCAATGCCCTCACCGGATATGGACCGAATTGTCTCACGATATTCTGAATCCAGCTCATGTGCTTGAATGGGCTAACAACCCAACCCTTGGAACATATTGTTATAAATTACTTACCTCCATAATAGTATGATATTGTCCACTTTGAGTATAAGCTCTTATGGCTTTACTTTTGGTTTTTCCAAAAGGCCTCGTACCAATGGAGACGTATTTCTTAATTATAAACTCATGATCAACTTCTTAATTGGTTGATGTGGGACTCCTCTCCCAACCGTTCTCAACACATACTACAGCCCCAAGTGGCGAAGAGCCGACTTCGAGGTGCTAAACCTTCACGTCGATGTGAACTCTTGGGGAAGATCAAATATGTTATCCCTAGAGTAACCTTTATCCGTTGAGCAACAGATCATCCACTAGGCACTGTCGGATCACTAAGGCCGACTTTTGTCCCTGCTTGATGGGTGGATCTTGCAGTCAAGCTCCCTCCTACCTTTGCACTCGTAGCCGGGGGAAACCTTTGCATGCCTATGGTGAAAACCGAAAATTCTCGTCCCTGTCCTTGATTTCAAAGTGTTTCCTCTGTTTATGATTGTTCAAATATATATCAGTGAACTCTCTCCTGCATTGCTGTCTTGACTTACTTCAATCACTGAATTTATCAGAGTTTTACCTTTCTCTTACAATATGTTACTATGCAGCTTGGAGATGGCAGCTTCAGAACCCGGAACCGAAGACATTTGTTCAGATATTTACGTTAATCTCGGGCTCAAGTCATTGCGCAAAGGAATCCGAAGAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTATTGGAACGCTCTGTTAAAAAAAATGAATTGCTAATGGAGGCCACACAAGTCAAAGACGCTCGTACGATGTTTCATGGTCTTCGAGCTCCCACCCTGAGTATTCGGTGCTATATCGATCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTCGTCATTGCAAATATCTATGTCGATCGATTTCTCAAGTGCACGGAGATTCAGTTAACTTCTCTTAACGTTCATCGGCTGCTGATAACGAGCATAATGCTGGCTGCTAAGTTCATCGACGACTCGTAAGCACCACCCTATAAATGACTCTATTTTGTGATATACGTGCAACTCAATTACTCGATTTGCAGATTCTTCAACAATGCATACTATGCGAAAGTTGGGGGCGTAAGCACGACGGAGTTAAACAAACTGGAGATGAAGTTCTTGTTTAGTATAGACTTTAGACTTCAGGTGAATATACAGACGTTCGGTCGATACTGTTATCAACTGGAAAAAGAAGGCACCGGAACACGTCAAATCGAACGCTCGATTCGAGCTTGTAGCATCAAGGAGAGCTGGTCAAATAAAGATGAGAAATCCCATGCTTCTTCCACAACAGCCAGATGATTTTTTTTTACCACAAACCACTGTATGTAAAATCACTACCTTTTCTTTTTACATTGCTTCATTTATGATTCGTTTAGAAATTATTTCCAATCTATCCTTTATGTTCTTGTGACTTCCTTGTCTTCATTTAAGCATTGGCGAGACTCCATTGTTGCAGTAGAAGAGCACTGATTGAATTATGTTCTATATATGTTTATAAATTGAATGCTAGTTTTGTGAGTAATAGCGGGTTTTTTTTTTATTACATACAAATGAGAATGATGAGATCTGAACATATGATTCGGTGACGTATCAGTGGCTAACCACTTGAACTATGTTCTAGTCGTAATAATTCTTCTAAGATTAAGAAAATACTGTGAGATTCCACATCGGTTGAAGAAGGGAACAAACCATTTTTCTAGCAGGTGAATTTTTATAATCGTGAAGCTAACGGTGATACGTAACGAGCTAAAACGAACAATATCTACTAGTGGTGGATCTGGACTATTACACGTAAGATATCGAACTAACTGAAGCGACATACAAACCGAATCCAACTGGGCCATACCAAACTAAACCAAGTAAAGCAATTTGGTTT AATGTTACCCCTAAAATTTTATTACATTATTTATCTCTCGCCCATTTGCTTTCTAGAGAGAGAAAGATAGTGAGAGAAGTTCCTGTTCTTGTGAATGTGTGAAGAATTCCCATGTGAAGAGGGAGAGAATCCTTGAACCCAATTTGTATCTAAAAAAGCAAAAGATTGAGCACAAAAGCAAGGGAGAAGGAAGGAACATGGAAGATAGAGCAGAGAACAAGCTTCATAACGCATTGTTTATCCTTCTTCCATCTCATTTAGATTCTCTTCTCCTTTCCCCTCTCATGTAGCGCTCGAACTAGATCCCATTGCTATCTCCTCCGTTTTTCCTCTTCTCTTGGAGATGGCAGCTTCAGAACCCGGAACCGAAGACATTTGTTCAGATATTTACGTTAATCTCGGGCTCAAGTCATTGCGCAAAGGAATCCGAAGAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTATTGGAACGCTCTGTTAAAAAAAATGAATTGCTAATGGAGGCCACACAAGTCAAAGACGCTCGTACGATGTTTCATGGTCTTCGAGCTCCCACCCTGAGTATTCGGTGCTATATCGATCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTCGTCATTGCAAATATCTATGTCGATCGATTTCTCAAGTGCACGGAGATTCAGTTAACTTCTCTTAACGTTCATCGGCTGCTGATAACGAGCATAATGCTGGCTGCTAAGTTCATCGACGACTCATTCTTCAACAATGCATACTATGCGAAAGTTGGGGGCGTAAGCACGACGGAGTTAAACAAACTGGAGATGAAGTTCTTGTTTAGTATAGACTTTAGACTTCAGGTGAATATACAGACGTTCGGTCGATACTGTTATCAACTGGAAAAAGAAGGCACCGGAACACGTCAAATCGAACGCTCGATTCGAGCTTGTAGCATCAAGGAGAGCTGGTCAAATAAAGATGAGAAATCCCATGCTTCTTCCACAACAGCCAGATGATTTTTTTTTACCACAAACCACTGTATGTAAAATCACTACCTTTTCTTTTTACATTGCTTCATTTATGATTCGTTTAGAAATTATTTCCAATCTATCCTTTATGTTCTTGTGACTTCCTTGTCTTCATTTAAGCATTGGCGAGACTCCATTGTTGCAGTAGAAGAGCACTGATTGAATTATGTTCTATATATGTTTATAAATTGAATGCTAGTTTTGTGAGTAATAGCGGGTTTTTTTTTTATTACATACAAATGAGAATGATGAGATCTGAACATATGATTCGGTGACGTATCAGTGGCTAACCACTTGAACTATGTTCTAGTCGTAATAATTCTTCTAAGATTAAGAAAATACTGTGAGATTCCACATCGGTTGAAGAAGGGAACAAACCATTTTTCTAGCAGGTGAATTTTTATAATCGTGAAGCTAACGGTGATACGTAACGAGCTAAAACGAACAATATCTACTAGTGGTGGATCTGGACTATTACACGTAAGATATCGAACTAACTGAAGCGACATACAAACCGAATCCAACTGGGCCATACCAAACTAAACCAAGTAAAGCAATTTGGTTT ATGGCAGCTTCAGAACCCGGAACCGAAGACATTTGTTCAGATATTTACGTTAATCTCGGGCTCAAGTCATTGCGCAAAGGAATCCGAAGAAATCCTCGGGTTCTCACGCTTCTTTCTTCACTATTGGAACGCTCTGTTAAAAAAAATGAATTGCTAATGGAGGCCACACAAGTCAAAGACGCTCGTACGATGTTTCATGGTCTTCGAGCTCCCACCCTGAGTATTCGGTGCTATATCGATCGCATCTTCAAGTACTTCGGCTGCAGCCCATCATGCTTCGTCATTGCAAATATCTATGTCGATCGATTTCTCAAGTGCACGGAGATTCAGTTAACTTCTCTTAACGTTCATCGGCTGCTGATAACGAGCATAATGCTGGCTGCTAAGTTCATCGACGACTCATTCTTCAACAATGCATACTATGCGAAAGTTGGGGGCGTAAGCACGACGGAGTTAAACAAACTGGAGATGAAGTTCTTGTTTAGTATAGACTTTAGACTTCAGGTGAATATACAGACGTTCGGTCGATACTGTTATCAACTGGAAAAAGAAGGCACCGGAACACGTCAAATCGAACGCTCGATTCGAGCTTGTAGCATCAAGGAGAGCTGGTCAAATAAAGATGAGAAATCCCATGCTTCTTCCACAACAGCCAGATGA MAASEPGTEDICSDIYVNLGLKSLRKGIRRNPRVLTLLSSLLERSVKKNELLMEATQVKDARTMFHGLRAPTLSIRCYIDRIFKYFGCSPSCFVIANIYVDRFLKCTEIQLTSLNVHRLLITSIMLAAKFIDDSFFNNAYYAKVGGVSTTELNKLEMKFLFSIDFRLQVNIQTFGRYCYQLEKEGTGTRQIERSIRACSIKESWSNKDEKSHASSTTAR Homology
BLAST of Carg07248 vs. NCBI nr
Match: KAG6575905.1 (Cyclin-P3-1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 430.6 bits (1106), Expect = 7.9e-117 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Carg07248 vs. NCBI nr
Match: KAG7014439.1 (Cyclin-P3-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 430.6 bits (1106), Expect = 7.9e-117 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Carg07248 vs. NCBI nr
Match: XP_022954187.1 (cyclin-P3-1 [Cucurbita moschata] >XP_022954188.1 cyclin-P3-1 [Cucurbita moschata]) HSP 1 Score: 428.7 bits (1101), Expect = 3.0e-116 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Carg07248 vs. NCBI nr
Match: XP_022992552.1 (cyclin-P3-1-like [Cucurbita maxima] >XP_022992553.1 cyclin-P3-1-like [Cucurbita maxima]) HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113 Identity = 214/219 (97.72%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of Carg07248 vs. NCBI nr
Match: XP_008451358.1 (PREDICTED: cyclin-P3-1 [Cucumis melo]) HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107 Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy Swiss-Prot
Match: Q75HV0 (Cyclin-P3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCP3-1 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 4.1e-52 Identity = 102/183 (55.74%), Postives = 145/183 (79.23%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy Swiss-Prot
Match: Q8LB60 (Cyclin-U3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU3-1 PE=1 SV=2) HSP 1 Score: 195.3 bits (495), Expect = 7.3e-49 Identity = 114/219 (52.05%), Postives = 147/219 (67.12%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy Swiss-Prot
Match: O80513 (Cyclin-U4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-1 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39 Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy Swiss-Prot
Match: Q9LJ45 (Cyclin-U1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCU1-1 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.2e-37 Identity = 76/155 (49.03%), Postives = 112/155 (72.26%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy Swiss-Prot
Match: Q9LY16 (Cyclin-U4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCU4-2 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 6.0e-35 Identity = 73/154 (47.40%), Postives = 109/154 (70.78%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy TrEMBL
Match: A0A6J1GQB2 (Cyclin OS=Cucurbita moschata OX=3662 GN=LOC111456524 PE=3 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.5e-116 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy TrEMBL
Match: A0A6J1JZK0 (Cyclin OS=Cucurbita maxima OX=3661 GN=LOC111488841 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 8.8e-114 Identity = 214/219 (97.72%), Postives = 215/219 (98.17%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy TrEMBL
Match: A0A1S3BRA2 (Cyclin OS=Cucumis melo OX=3656 GN=LOC103492671 PE=3 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 7.2e-108 Identity = 206/219 (94.06%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy TrEMBL
Match: A0A5D3D4N5 (Cyclin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2032G00210 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107 Identity = 205/219 (93.61%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of Carg07248 vs. ExPASy TrEMBL
Match: A0A0A0K7D6 (Cyclin OS=Cucumis sativus OX=3659 GN=Csa_7G389460 PE=3 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106 Identity = 203/219 (92.69%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of Carg07248 vs. TAIR 10
Match: AT3G63120.1 (cyclin p1;1 ) HSP 1 Score: 195.3 bits (495), Expect = 5.2e-50 Identity = 114/219 (52.05%), Postives = 147/219 (67.12%), Query Frame = 0
BLAST of Carg07248 vs. TAIR 10
Match: AT2G44740.1 (cyclin p4;1 ) HSP 1 Score: 164.9 bits (416), Expect = 7.5e-41 Identity = 86/181 (47.51%), Postives = 117/181 (64.64%), Query Frame = 0
BLAST of Carg07248 vs. TAIR 10
Match: AT3G05327.1 (Cyclin family protein ) HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39 Identity = 83/159 (52.20%), Postives = 112/159 (70.44%), Query Frame = 0
BLAST of Carg07248 vs. TAIR 10
Match: AT3G21870.1 (cyclin p2;1 ) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-38 Identity = 76/155 (49.03%), Postives = 112/155 (72.26%), Query Frame = 0
BLAST of Carg07248 vs. TAIR 10
Match: AT5G07450.1 (cyclin p4;3 ) HSP 1 Score: 149.1 bits (375), Expect = 4.3e-36 Identity = 73/154 (47.40%), Postives = 109/154 (70.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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