Carg07044 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAACAAAATTAGATTCATTCTTCCATTGCAATTGAATCTCTGGAAGCCATGGATTCTCCGCCCAAACTCTGTTCAATCGCTTACATTTCTTATCTGCTGCTACTCTTGCTTTGCTCGTTGTTGTTTCCTGTTTCATCTACTACATACTCCATAGCCACAACCTCCAATTATGGCACCGGAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGACGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGCCGCAACGATTCCATCACTTGTCAGGTCCTCCGTTTAATTCGTTCATTAGATTCGTTGTTTTCTTTCTTGACGATTTCTGTTTCGGTTAATTACTAAATAAATGGCGTATTTCGTTTGTTTGCATGCTTGATTTGACTTCAGTGTTCTGTTGATTTAGGTATTTGGTTATGGTTATGGTTTGTTCAGGGATGAGAAATTGGTAGTTGTTCGGAATTTTAGGTTTAAAATTGAATATGCAATTATGCGCAATTCTTCCGAATCTGATATGCTTTTGTTTATTGTATATTGTTCAACATAATAACTTCTGCCTTGTTTACCATATTGTTTCTCCGGGCTTATAATACAAATCTCGTTGTTTACTCTTGCAGTTCCAATTTTATCATCAGTAAATCTCTTTATATTTCCACTTCTTCGCTATTTCGAGATTGATATTCCTCCTTTATCTGATAGCTTAAGCTGTTTGATGTCCATGTTAGAGTTCTTTTCTGTTCCGTTTTTTTAAGTTGGTGTTCATGATTTTATACTCTTTCTACACAGTTTAACTTGCCTATGGATGGCTGGATGTGCTTGCATCCGTATAAACTGTCTAATAAACTTGTACTTTGTGGTTGTAATTTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGTAAGACTTCTGATGGGAGCATGAGACTAGTCAGTTTCTTACAAAACCCTTTCCTTGTTTAATACATAGTTTCCAGCATGTAACTACGTGTCATTATGATCATTGATGATGGGTTTTTTCCATTTGCTTCGATCTGTACAAAGTTCTCCTTACTAATATTATTTTGCTACCCAATAATCTAATGGAATTGGTGGTGGATTGTCTGTTTATATATTTTTCTCTAATAGTCATCTTGGAATTAAATGCTGAAACTCATTTCTTATATTACATACCTTTCAAAGTGAGTGAGTTGGAATTATGGGGATAAAAGTTCTCATGTACTTATACTGCAGGATGGTCATTTTCCTTTCATTTACTGCATCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGAATGCTACCATACTGAGCTTGGGAAAATGGTGAGTTGTTTTAAATTACTCGGTTCAGATTTTTGTGTTAGTTCAAGTTTCATATATTGATAAGATATAACATTGTATAGAATACAAAGACTATGTAATGGCACCTACTCAACTAATCCTGTACTGCTGTAACGGGTTCTTTCCAACATATCTAGCTGTTATGATTTTCGACTGACTGAAGATTTCACAGATTTCATTGACTGAGCATTAGGTTCATAATCAGTTCCCGGTCTCTAGGTTGTGATTGGGTAAACAAACATAGAGATTATGGACAATTCGATATGGAATCAAATTTTCTATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACTCTTTATAAGAGTGTGGAAACCTCCCCTTGCAGACGCGTTTTAAAAACCTTGAGGGAAAGCTCGAAAGGGAAAGCCCAAAGAGAACAATATCTACTAGCGGTAGGCATGCGTCATATAATTTGATTTTTATCATCTTCGTGCAGCTTGAACTGAAATATGCGGCTGAAACCGACAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGTTTGTTTCCTTCTTTCTGTTATGCTCACTCGTCTGCTCACGTACAAATTAACTGCATAAAGGTCTAGGCATGGGTCATACAAACATGGAAACGGTTTATTTATCTACTTATAAGGATTATTATAACATTCCCTTGCTATAGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTCAGGCTTCGTCCATTAGTGCCATTTGAAGATGAAAAGCCAAGTCCAGCCTCCCAAATAGTGCAAGAAGACAGAGATGATGATAACGTTGATAAAACAAGAATACAATCGAGGTGATAAGTGTTATTTATTATACTGCTTGAATGATGTCACCTTGTATGTACCCCCACACTCTGAAATTGTTCGGTTTAATTTATGGATAAAATGCACTTTTAGTAGTGAGATATGAATCGTTATCTATTTGGTCCATGAAATTTCAATAGAGACACTTTAGCCTCTTGAGTTTGCGAAGTAATTTTAAATGGTCCTGACATGTCATTTGCTTGGATGACTTGGTAAATAAAATATGACACGTCATTCA TTTAACAAAATTAGATTCATTCTTCCATTGCAATTGAATCTCTGGAAGCCATGGATTCTCCGCCCAAACTCTGTTCAATCGCTTACATTTCTTATCTGCTGCTACTCTTGCTTTGCTCGTTGTTGTTTCCTGTTTCATCTACTACATACTCCATAGCCACAACCTCCAATTATGGCACCGGAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGACGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGCCGCAACGATTCCATCACTTGTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGATGGTCATTTTCCTTTCATTTACTGCATCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGAATGCTACCATACTGAGCTTGGGAAAATGCTTGAACTGAAATATGCGGCTGAAACCGACAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTCAGGCTTCGTCCATTAGTGCCATTTGAAGATGAAAAGCCAAGTCCAGCCTCCCAAATAGTGCAAGAAGACAGAGATGATGATAACGTTGATAAAACAAGAATACAATCGAGGTGATAAGTGTTATTTATTATACTGCTTGAATGATGTCACCTTGTATGTACCCCCACACTCTGAAATTGTTCGGTTTAATTTATGGATAAAATGCACTTTTAGTAGTGAGATATGAATCGTTATCTATTTGGTCCATGAAATTTCAATAGAGACACTTTAGCCTCTTGAGTTTGCGAAGTAATTTTAAATGGTCCTGACATGTCATTTGCTTGGATGACTTGGTAAATAAAATATGACACGTCATTCA ATGGATTCTCCGCCCAAACTCTGTTCAATCGCTTACATTTCTTATCTGCTGCTACTCTTGCTTTGCTCGTTGTTGTTTCCTGTTTCATCTACTACATACTCCATAGCCACAACCTCCAATTATGGCACCGGAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGACGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGCCGCAACGATTCCATCACTTGTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGATGGTCATTTTCCTTTCATTTACTGCATCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAATGAATGCTACCATACTGAGCTTGGGAAAATGCTTGAACTGAAATATGCGGCTGAAACCGACAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTCAGGCTTCGTCCATTAGTGCCATTTGA MDSPPKLCSIAYISYLLLLLLCSLLFPVSSTTYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDLISIVDLRLVPYGNARVGRNDSITCQHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPKPINECYHTELGKMLELKYAAETDNLEPPHKYVPWVVVDGKPLYEDYENFINYICEAYKGPVLPSACQASSISAI Homology
BLAST of Carg07044 vs. NCBI nr
Match: KAG7037013.1 (Gamma-interferon-inducible lysosomal thiol reductase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 485.7 bits (1249), Expect = 2.2e-133 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Carg07044 vs. NCBI nr
Match: KAG6607336.1 (Gamma-interferon-responsive lysosomal thiol protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 484.2 bits (1245), Expect = 6.3e-133 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0
BLAST of Carg07044 vs. NCBI nr
Match: XP_022948291.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata]) HSP 1 Score: 482.3 bits (1240), Expect = 2.4e-132 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0
BLAST of Carg07044 vs. NCBI nr
Match: XP_023523171.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 477.2 bits (1227), Expect = 7.7e-131 Identity = 225/230 (97.83%), Postives = 227/230 (98.70%), Query Frame = 0
BLAST of Carg07044 vs. NCBI nr
Match: XP_022998561.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 473.8 bits (1218), Expect = 8.5e-130 Identity = 224/230 (97.39%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy Swiss-Prot
Match: Q9SV73 (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.6e-46 Identity = 91/188 (48.40%), Postives = 121/188 (64.36%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy Swiss-Prot
Match: P13284 (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 114.4 bits (285), Expect = 1.7e-24 Identity = 72/190 (37.89%), Postives = 98/190 (51.58%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy Swiss-Prot
Match: B3SP85 (Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa OX=9823 GN=IFI30 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24 Identity = 74/185 (40.00%), Postives = 100/185 (54.05%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy Swiss-Prot
Match: Q499T2 (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 8.5e-24 Identity = 70/185 (37.84%), Postives = 100/185 (54.05%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy Swiss-Prot
Match: O17861 (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.2e-23 Identity = 62/190 (32.63%), Postives = 103/190 (54.21%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy TrEMBL
Match: A0A6J1G8V6 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111452006 PE=3 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy TrEMBL
Match: A0A6J1KAH6 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111493159 PE=3 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 4.1e-130 Identity = 224/230 (97.39%), Postives = 228/230 (99.13%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy TrEMBL
Match: A0A5D3BE41 (Gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00630 PE=3 SV=1) HSP 1 Score: 410.2 bits (1053), Expect = 5.6e-111 Identity = 195/230 (84.78%), Postives = 207/230 (90.00%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy TrEMBL
Match: A0A0A0LXR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533560 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 6.4e-107 Identity = 190/230 (82.61%), Postives = 206/230 (89.57%), Query Frame = 0
BLAST of Carg07044 vs. ExPASy TrEMBL
Match: A0A1S3C735 (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497224 PE=3 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 1.0e-104 Identity = 180/204 (88.24%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of Carg07044 vs. TAIR 10
Match: AT1G07080.1 (Thioredoxin superfamily protein ) HSP 1 Score: 266.9 bits (681), Expect = 1.5e-71 Identity = 127/212 (59.91%), Postives = 165/212 (77.83%), Query Frame = 0
BLAST of Carg07044 vs. TAIR 10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 208.0 bits (528), Expect = 8.1e-54 Identity = 94/196 (47.96%), Postives = 129/196 (65.82%), Query Frame = 0
BLAST of Carg07044 vs. TAIR 10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 201.4 bits (511), Expect = 7.6e-52 Identity = 99/208 (47.60%), Postives = 132/208 (63.46%), Query Frame = 0
BLAST of Carg07044 vs. TAIR 10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 196.8 bits (499), Expect = 1.9e-50 Identity = 101/213 (47.42%), Postives = 137/213 (64.32%), Query Frame = 0
BLAST of Carg07044 vs. TAIR 10
Match: AT4G12960.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein ) HSP 1 Score: 186.4 bits (472), Expect = 2.5e-47 Identity = 91/188 (48.40%), Postives = 121/188 (64.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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