Carg06982 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06982
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	17.8 kDa class I heat shock protein-like
Location	Carg_Chr01: 4154193 .. 4154989 (+)
RNA-Seq Expression	Carg06982
Synteny	Carg06982

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACATCTTCTTCTTCTTCTTGATCAAGTCAGGATTATCCATTTCAATAAGAAACCACATTACTTCTGATATGCATTTACAAAACGCATATTCCTTCTCAAGAACAACAACAACAAAACCATAAGAAATCTCTGCGATTCAAAATTTCCTCGTATAAAACCCTCACCCTCCCACAATTATCTCCATTCAACAATGGCGGAACAGGCACCATCAGATTTGCCCAACGAAGAATTCAAACCTTTCTGCGAATGGAAAAGGCTCGAAGACTCCGATGTTCTTCAGGTTCATCTCGCAGGTACATTATCAACTCACGCTTTCCTTCGCTTTCTCATAAACACATTCATAGCGATTCGAATTTCATAAACAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAAGAACAACTCCGTCCTTACACTTACCGGCGAGCGCCTAGCAGCCGGAGACTGGAAGAAGATCCGTTTCAACAGTGAAATCAAACTCCCAAAGGATACACCTCCAGATCAAATCCGTGCCAAATTCGGCGACTCTGTTCTTTCGATTACGATGCCGAAGAAGAAAGCCTCACCAGCCTCCATTGATAATGCTTGCCCTAGAAACTTCATATCCGGAGTAAAGTCTTCATTAGCAAGGTTGAAATTTAGCAAGGAATCGGCTGTGGCTATGGCGGTTGCGGGACTCATTCTGGCCTCGGGAGCTTACTACTTGATAGAAAACCCTAATCCGCATTGATTTCTGTAATTCCTGTTATTACTTTTTAAGGCTAAATTAATAAATTAATTCTTTTAACTTA

mRNA sequence

CTTACATCTTCTTCTTCTTCTTGATCAAGTCAGGATTATCCATTTCAATAAGAAACCACATTACTTCTGATATGCATTTACAAAACGCATATTCCTTCTCAAGAACAACAACAACAAAACCATAAGAAATCTCTGCGATTCAAAATTTCCTCGTATAAAACCCTCACCCTCCCACAATTATCTCCATTCAACAATGGCGGAACAGGCACCATCAGATTTGCCCAACGAAGAATTCAAACCTTTCTGCGAATGGAAAAGGCTCGAAGACTCCGATGTTCTTCAGGTTCATCTCGCAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAAGAACAACTCCGTCCTTACACTTACCGGCGAGCGCCTAGCAGCCGGAGACTGGAAGAAGATCCGTTTCAACAGTGAAATCAAACTCCCAAAGGATACACCTCCAGATCAAATCCGTGCCAAATTCGGCGACTCTGTTCTTTCGATTACGATGCCGAAGAAGAAAGCCTCACCAGCCTCCATTGATAATGCTTGCCCTAGAAACTTCATATCCGGAGTAAAGTCTTCATTAGCAAGGTTGAAATTTAGCAAGGAATCGGCTGTGGCTATGGCGGTTGCGGGACTCATTCTGGCCTCGGGAGCTTACTACTTGATAGAAAACCCTAATCCGCATTGATTTCTGTAATTCCTGTTATTACTTTTTAAGGCTAAATTAATAAATTAATTCTTTTAACTTA

Coding sequence (CDS)

ATGGCGGAACAGGCACCATCAGATTTGCCCAACGAAGAATTCAAACCTTTCTGCGAATGGAAAAGGCTCGAAGACTCCGATGTTCTTCAGGTTCATCTCGCAGAATTCAAGAAGGAAGAATTGAGGGTTCGGATCAAGAACAACTCCGTCCTTACACTTACCGGCGAGCGCCTAGCAGCCGGAGACTGGAAGAAGATCCGTTTCAACAGTGAAATCAAACTCCCAAAGGATACACCTCCAGATCAAATCCGTGCCAAATTCGGCGACTCTGTTCTTTCGATTACGATGCCGAAGAAGAAAGCCTCACCAGCCTCCATTGATAATGCTTGCCCTAGAAACTTCATATCCGGAGTAAAGTCTTCATTAGCAAGGTTGAAATTTAGCAAGGAATCGGCTGTGGCTATGGCGGTTGCGGGACTCATTCTGGCCTCGGGAGCTTACTACTTGATAGAAAACCCTAATCCGCATTGA

Protein sequence

MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAAGDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH

Homology

[Close]

BLAST of Carg06982 vs. NCBI nr
Match: XP_022949141.1 (17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6607408.1 17.8 kDa class I heat shock protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037074.1 17.8 kDa class I heat shock protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 311.6 bits (797), Expect = 3.8e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA
Sbjct: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120
           GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS
Sbjct: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120

Query: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH 157
           SLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH
Sbjct: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH 156

[Close]

BLAST of Carg06982 vs. NCBI nr
Match: XP_023525578.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.3 bits (734), Expect = 7.7e-74
Identity = 147/152 (96.71%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           MAEQAPSDLP EEF+PFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTL+GERLAA
Sbjct: 1   MAEQAPSDLPYEEFEPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLSGERLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120
            DWKKIRFNSEIKLPKDT PDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS
Sbjct: 61  EDWKKIRFNSEIKLPKDTLPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120

Query: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
           SLARLKFSKESAVAMAVAGLILASGAYYLIEN
Sbjct: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIEN 152

[Close]

BLAST of Carg06982 vs. NCBI nr
Match: XP_023522013.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 3.2e-72
Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           MAEQAPSDLP EEF+PFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTL+GERLAA
Sbjct: 1   MAEQAPSDLPYEEFEPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLSGERLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120
            DWKKIRFNSEIKLPKDT  DQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS
Sbjct: 61  EDWKKIRFNSEIKLPKDTLTDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120

Query: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
           SLA LKFSKESAVAMAVAGLILASGAYYLIEN
Sbjct: 121 SLASLKFSKESAVAMAVAGLILASGAYYLIEN 152

[Close]

BLAST of Carg06982 vs. NCBI nr
Match: XP_022998052.1 (17.4 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61
Identity = 134/162 (82.72%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           MAEQAPSDLP EEF+PFC+WKRLED DVLQVHLA FKKEELRVRIKNNSVLT++GERLAA
Sbjct: 1   MAEQAPSDLPYEEFEPFCQWKRLEDCDVLQVHLAAFKKEELRVRIKNNSVLTVSGERLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASP----------ASIDNAC 120
            D KKIRFN EIKLPKDT P +I AKF DSVLSIT+P KKASP          ASIDNAC
Sbjct: 61  KDGKKIRFNREIKLPKDTFPGKICAKFDDSVLSITIP-KKASPKTDASETKLTASIDNAC 120

Query: 121 PRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
           PRNFISGVKSSLARLKFSKESAVAMAVAGL+LASGAYYLIEN
Sbjct: 121 PRNFISGVKSSLARLKFSKESAVAMAVAGLMLASGAYYLIEN 161

[Close]

BLAST of Carg06982 vs. NCBI nr
Match: XP_008465577.1 (PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa] >TYJ98853.1 16.9 kDa class I heat shock protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 194.5 bits (493), Expect = 6.8e-46
Identity = 107/168 (63.69%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           M +  PS +  EEF+PFC+WK+LEDSDVL+VHL EFKKEELRVRIKNNS+LTL+GE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASP---------ASID---- 120
            D KK+ FN EIKLPKD  PD+IRAKFG +VLSITMPKK + P         AS D    
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 ---NACPRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
              N  P+NFIS +KS L+RLKFSKE+A AMAVA +ILA G YYLI+N
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Carg06982 vs. ExPASy Swiss-Prot
Match: Q9LNW0 (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 19  EWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAAGD-----WKKI-----RF 78
           +WK   ++ V +  L   KKEE++V I+++SVL ++GER    +     W ++     +F
Sbjct: 51  DWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQF 110

Query: 79  NSEIKLPKDTPPDQIRAKFGDSVLSITMP-----KKKASPASID 108
           + + KLP++   DQ++A   + VL++T+P     KKKA   SID
Sbjct: 111 SRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSID 154

[Close]

BLAST of Carg06982 vs. ExPASy Swiss-Prot
Match: Q9XIE3 (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 4   QAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAAGD- 63
           Q PS   +       +WK   ++ V +  L   KKEE++V I+++SVL ++GER    + 
Sbjct: 34  QFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEE 93

Query: 64  ----WKKIR-----FNSEIKLPKDTPPDQIRAKFGDSVLSITMP-----KKKASPASID 108
               W ++      F+ + +LP++   DQ++A   + VL++T+P     KKKA   SID
Sbjct: 94  KQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSID 152

[Close]

BLAST of Carg06982 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 12  EEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVR-IKNNSVLTLTGER-LAAGDWKKIRFN 71
           E+F P  EWK   ++ +L + L  F KE+++V  + ++ ++ +TGER LA   W   RFN
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWN--RFN 76

Query: 72  SEIKLPKDTPPDQIRAKFGDSVLSITMPKK 100
               +P++   D+I   F ++VL+ITMPK+
Sbjct: 77  EVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of Carg06982 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 12  EEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVR-IKNNSVLTLTGER-LAAGDWKKIRFN 71
           E+F P  EWK   ++ +L + L  F KE+++V  + ++ ++ +TGER LA   W   RFN
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWS--RFN 76

Query: 72  SEIKLPKDTPPDQIRAKFGDSVLSITMPKK 100
               +P++   D+I   F ++VL+ITMPK+
Sbjct: 77  EVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of Carg06982 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-08
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 12  EEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVR-IKNNSVLTLTGER-LAAGDWKKIRFN 71
           E+F P  EWK   ++ +L + L  F KE+++V  + ++ ++ +TGER LA   W   RFN
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWS--RFN 76

Query: 72  SEIKLPKDTPPDQIRAKFGDSVLSITMPKK 100
               +P++   D+I   F ++VL+ITMPK+
Sbjct: 77  EVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of Carg06982 vs. ExPASy TrEMBL
Match: A0A6J1GB70 (17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111452581 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA
Sbjct: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120
           GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS
Sbjct: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASPASIDNACPRNFISGVKS 120

Query: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH 157
           SLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH
Sbjct: 121 SLARLKFSKESAVAMAVAGLILASGAYYLIENPNPH 156

[Close]

BLAST of Carg06982 vs. ExPASy TrEMBL
Match: A0A6J1K6T1 (17.4 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111492817 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 9.5e-62
Identity = 134/162 (82.72%), Postives = 141/162 (87.04%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           MAEQAPSDLP EEF+PFC+WKRLED DVLQVHLA FKKEELRVRIKNNSVLT++GERLAA
Sbjct: 1   MAEQAPSDLPYEEFEPFCQWKRLEDCDVLQVHLAAFKKEELRVRIKNNSVLTVSGERLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASP----------ASIDNAC 120
            D KKIRFN EIKLPKDT P +I AKF DSVLSIT+P KKASP          ASIDNAC
Sbjct: 61  KDGKKIRFNREIKLPKDTFPGKICAKFDDSVLSITIP-KKASPKTDASETKLTASIDNAC 120

Query: 121 PRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
           PRNFISGVKSSLARLKFSKESAVAMAVAGL+LASGAYYLIEN
Sbjct: 121 PRNFISGVKSSLARLKFSKESAVAMAVAGLMLASGAYYLIEN 161

[Close]

BLAST of Carg06982 vs. ExPASy TrEMBL
Match: A0A5D3BHU7 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00480 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.3e-46
Identity = 107/168 (63.69%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           M +  PS +  EEF+PFC+WK+LEDSDVL+VHL EFKKEELRVRIKNNS+LTL+GE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASP---------ASID---- 120
            D KK+ FN EIKLPKD  PD+IRAKFG +VLSITMPKK + P         AS D    
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 ---NACPRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
              N  P+NFIS +KS L+RLKFSKE+A AMAVA +ILA G YYLI+N
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Carg06982 vs. ExPASy TrEMBL
Match: A0A1S3CP71 (16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.3e-46
Identity = 107/168 (63.69%), Postives = 125/168 (74.40%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           M +  PS +  EEF+PFC+WK+LEDSDVL+VHL EFKKEELRVRIKNNS+LTL+GE L A
Sbjct: 1   MEKGEPSGVLYEEFEPFCKWKKLEDSDVLEVHLPEFKKEELRVRIKNNSILTLSGEHLTA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASP---------ASID---- 120
            D KK+ FN EIKLPKD  PD+IRAKFG +VLSITMPKK + P         AS D    
Sbjct: 61  KDGKKMHFNREIKLPKDIYPDEIRAKFGGNVLSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 ---NACPRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
              N  P+NFIS +KS L+RLKFSKE+A AMAVA +ILA G YYLI+N
Sbjct: 121 SNGNGKPKNFISRLKSPLSRLKFSKETATAMAVAVVILAVGVYYLIKN 168

[Close]

BLAST of Carg06982 vs. ExPASy TrEMBL
Match: A0A0A0LT66 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 4.4e-43
Identity = 99/168 (58.93%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           M +  PSD+   +F+P+C+WK++EDSDVL+V L EFKKEELRVRIKNNS+LT++GE+LAA
Sbjct: 1   MEKGEPSDVLYVKFEPYCQWKKIEDSDVLEVQLPEFKKEELRVRIKNNSILTISGEQLAA 60

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPKKKASP---------ASID---- 120
            D KK+ FN +IKLPKD  PD+IRAKFG ++LSITMPKK + P         AS D    
Sbjct: 61  KDGKKMHFNRDIKLPKDVFPDEIRAKFGGNILSITMPKKASPPEISKPNPDNASEDKLTQ 120

Query: 121 ---NACPRNFISGVKSSLARLKFSKESAVAMAVAGLILASGAYYLIEN 153
              N  P+NFIS +KS L+RLKFSK +A AMA A +ILA G YYLI+N
Sbjct: 121 SNGNGKPKNFISKLKSPLSRLKFSKATATAMATAVVILAVGVYYLIKN 168

[Close]

BLAST of Carg06982 vs. TAIR 10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 42/88 (47.73%), Postives = 58/88 (65.91%), Query Frame = 0


Query: 12  EEFKPFCEWKRLEDSDVLQVHL-AEFKKEELRVRIKNNSVLTLTGERLAAGDWKKIRFNS 71
           +E +PFC W+R ED D+L++HL +  KKE L+++I N+ VLT+TG        K IRF  
Sbjct: 14  DEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITG-GCPVDQTKTIRFMK 73

Query: 72  EIKLPKDTPPDQIRAKFGDSVLSITMPK 99
           E K+ KD   ++IRAKF   VL +TMPK
Sbjct: 74  ETKVAKDCKRNEIRAKFSKGVLYVTMPK 100

[Close]

BLAST of Carg06982 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 8.3e-10
Identity = 35/104 (33.65%), Postives = 60/104 (57.69%), Query Frame = 0


Query: 19  EWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAAGD-----WKKI-----RF 78
           +WK   ++ V +  L   KKEE++V I+++SVL ++GER    +     W ++     +F
Sbjct: 51  DWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQF 110

Query: 79  NSEIKLPKDTPPDQIRAKFGDSVLSITMP-----KKKASPASID 108
           + + KLP++   DQ++A   + VL++T+P     KKKA   SID
Sbjct: 111 SRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSID 154

[Close]

BLAST of Carg06982 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 37/119 (31.09%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 4   QAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAAGD- 63
           Q PS   +       +WK   ++ V +  L   KKEE++V I+++SVL ++GER    + 
Sbjct: 34  QFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEE 93

Query: 64  ----WKKIR-----FNSEIKLPKDTPPDQIRAKFGDSVLSITMP-----KKKASPASID 108
               W ++      F+ + +LP++   DQ++A   + VL++T+P     KKKA   SID
Sbjct: 94  KQDTWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSID 152

[Close]

BLAST of Carg06982 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 12  EEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVR-IKNNSVLTLTGER-LAAGDWKKIRFN 71
           E+F P  EWK   ++ +L + L  F KE+++V  + ++ ++ +TGER LA   W   RFN
Sbjct: 17  EDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVTGERPLANRKWS--RFN 76

Query: 72  SEIKLPKDTPPDQIRAKFGDSVLSITMPKK 100
               +P++   D+I   F ++VL+ITMPK+
Sbjct: 77  EVFTVPQNCLVDKIHGSFKNNVLTITMPKE 104

[Close]

BLAST of Carg06982 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 30/98 (30.61%), Postives = 55/98 (56.12%), Query Frame = 0


Query: 1   MAEQAPSDLPNEEFKPFCEWKRLEDSDVLQVHLAEFKKEELRVRIKNNSVLTLTGERLAA 60
           +++ A ++   +EF+P   WK  +  + L ++L  F+KE+L+V++     L + G+R  A
Sbjct: 4   ISDHANANRIYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDR-PA 63

Query: 61  GDWKKIRFNSEIKLPKDTPPDQIRAKFGDSVLSITMPK 99
           G  K IRF  E  +P +   D + AKF  + L + +P+
Sbjct: 64  GANKWIRFRKEFPIPPNIDVDSVSAKFEGANLVVRLPR 100

The following BLAST results are available for this feature:

BLAST of Carg06982 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949141.1	3.8e-81	100.00	17.8 kDa class I heat shock protein-like [Cucurbita moschata] >KAG6607408.1 17.8...	[more]
XP_023525578.1	7.7e-74	96.71	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_023522013.1	3.2e-72	95.39	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998052.1	2.0e-61	82.72	17.4 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_008465577.1	6.8e-46	63.69	PREDICTED: 16.9 kDa class I heat shock protein 1 [Cucumis melo] >KAA0036046.1 16...	[more]

BLAST of Carg06982 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNW0	1.2e-08	33.65	17.8 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.8 P...	[more]
Q9XIE3	2.6e-08	31.09	17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
D5K211	3.4e-08	36.67	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX6	3.4e-08	36.67	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX4	3.4e-08	36.67	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of Carg06982 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB70	1.8e-81	100.00	17.8 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1K6T1	9.5e-62	82.72	17.4 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A5D3BHU7	3.3e-46	63.69	16.9 kDa class I heat shock protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CP71	3.3e-46	63.69	16.9 kDa class I heat shock protein 1 OS=Cucumis melo OX=3656 GN=LOC103502934 PE...	[more]
A0A0A0LT66	4.4e-43	58.93	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G031780 PE=3 S...	[more]

BLAST of Carg06982 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54400.1	1.6e-16	47.73	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	8.3e-10	33.65	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	1.9e-09	31.09	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	2.4e-09	36.67	HSP20-like chaperones superfamily protein	[more]
AT2G27140.1	5.4e-09	30.61	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 20..102 e-value: 2.5E-10 score: 40.4
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 8..121 score: 16.746616
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 2..107 e-value: 6.9E-17 score: 63.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 11..102
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 11..149
None	No IPR available	PANTHER	PTHR43670:SF10	HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN	coord: 11..149
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 19..98 e-value: 2.01251E-14 score: 62.5716

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06982-RA	Carg06982-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane