Carg06655 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg06655
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA-binding protein RHL1-like isoform X2
Location	Carg_Chr18: 478740 .. 485382 (+)
RNA-Seq Expression	Carg06655
Synteny	Carg06655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGGCTCGAGGGATCCGAGAATAGACAGTGGTGGGTCTGCAGCCCACTGCCAGCATCAGAAATGGCGCGCGGATCATCGTCTTCGAAGACGAACAAAGCGAACGCAGAGCTCGAACCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTTTCCAATAATCTACTTTCAGGAACTCAGGCAAAGCCCCAGGGATGTCTGTGTCCATCCGCAACCGTTCTGAAGCACAATGGCAAAGACATTGTCAAGAAATCTCACCGAAAGAACAGGTTCCTCTTCTCGTTTTCAGGCTTGCTCGCCCCCGTCAGTGGAGGCAAGATTGGTGAGCTCAAGGATTTGGGATCCAAGAATCCAATTCTCTATCTCGAATTTCCTCAGGTTTGTCTTTTCCCTTTCTGTTTCTATCTGATTTAAAAGGTTTCTACGGTCTTCTTCGCTTTATTTCCATACTGGTTTTCGTTTTTAGTATGATTGGAGGTGCTTATTCAATATAAAATGATGTCGTAGTCTGCGTATTAGGCTGTTGTTTGTAATTTTCTACTACTTCTAATGGGTTTGATCGATGGTCCGAGCCAACACTCAGGTTTCTCCCACGTTTCTTCAATGCGTCCTTATTGCCTTCTGGGTGGCCATGATTAATTGTATTTTTCGTGGGAATAGCTATGATAATCATGGAAGCATGGGTGTCCTGAACTAAGAAAAGACAGAGAGTATAGGAGGTCAAAATTAAAGTTGCATCGAATAGATAATGGCAAATTTATTATGAAAAATGGTTTCTAGGGGACGATCTAGATACTGTTATCACAAATCCAAAGGGTAAGGATAAGCATTGTAGGCCTATTGAGTGAGATCAAACTCTAGTTGGTAAGGTAAAATTATAATTGGAAATGTAGATATTAAGCAAGAAGGAAACATATTTTTTGGCACAACAAATTATAATCCATAATTTAATCTACTAGATTTGTGAGATTCAAGAGAAGGTGGATTATTGGAAGTTGCAAATCCCAGTCAACAATTTTGTTATTCCCCAAGCATTTGAAGACCTAAACGAGTGATAAATCTCTTTATTGTTGAATCGAAGCATAATGGGTTTGGAAACTGCTGAGTAATGTCATTCAATTATTGATCAGTGAAGTATATTTGATTAGTCAACACTGCAAAACCGAAGAGCCAGCTTTCAACCATGACCTTACATGAACAAGATTTGTTCTATAGGTTGTACAACCATGTCTTCGAATTCTAGAGAGACCACATGATTATTTTATTTAAAGTAAATAAAATTATTTGGTTACTTTGAAGTTTGTATTTTAGCGATATTTCGTGATTAATATCACATTATCTATCAGTCGTTCTATAATTATCAGTATTCAATAAAACTAATTTACAATCTAATTAATCATTGTTTTACTTAACTCATATCTCCAATGATATTTTTTCTTCTTGTGTATCGGTTTGAGCTTAATAAGAGAAAATGAGATGCTGGGCTCAGCATTTGAGTCCTAGATAAACTCATTTGACCATTATAGCTTTAAAGCGAGTTAAATTTATGATGGTCGTCGTTGTTGTTATTGGCTTATTATTTACTTTCGCCTTATTTTGAGGTGTAAATTGCTTTCCTATACTTTTCGCAAATATCCATTGATTTATTTCTCGAATGCTGATGTAGATTTTATGTGGTCATTAAGAATCAAGTGGTGGAGTCGTTCTGACTCCTATTTCTTTTGCTTTTCAGGGACGTATGAAGTTGTTTGGAACTATAATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGAGGAAAGAATGTGACATGTGAAGATTATTTTGATAATATGGTTAGTCACTATCAAAAAAAAAAAAAAAAGAAATCCCCAGAAAAAATTCACTGTCAAATGTCTTTTTCTTGGTATTTAAAGAAGCCTTCTATGCATGTTATGAATCAAAGATTCTATTCTCTGACTGCAGATTGTCTTTTCGGATGCATGGTGGATTGGAACAAAAGATGAAAATCAAGAGGAGGCTCGTCTCGATTTTCCGAAAGAATTGTCTATGGTAAGTTTTTGGATAATTTTTAGGTTCTTAAAGTGCAATCTCCTTATGGTTTCTCGAGTACTCCTACTATTCCGGTGTAAAATTATTGCAAGGATCTCTATTGGGTAAAATTTAACCACAGCAAAGGACCAAATTTTGGTATCAACAATCTCGATTCTCAAGATCATTTATGGAGCAGAAGAGTGGAAATGCATCCTCTTCTGAGAGTCACAGAATAATTTATGCTGTGAGAGGACAATAATTTTTGTTGTCTAAACTTTTTAATTTCCTTGATTGACCATTTAGCAAAAAAGTAAGAAACTTAACTGGGCAGAGTCCTTACTGTTAAAAACAGTCGCTGTTTCGTAAAGTTCATGGTTTTTTAACTTGTAACTCTACTTGGGACCTCCGTGAAGCTGATTTTATTGTTTTAAGAAACCTAATTTACTATGTCTAATTTTCTTATTATTTTCTTTATGCTGAAGTTATCCGTTGGGCTGGTCAATATCATTGCTCTAGATTACTGTTTGGTCCATATTTATGTACTTGTTCTTCCAGTCCTGTGGATTTTTCTTATTATATATATTTTTCCTTTAGTCCGCTTTTACGACTTGTAATTAGCTAGAATAATTGTATATATTCTAGTGTCATATCTTTCTATGGAGGATTATAGATGTAACAACCTAAACCCACTGCTAGCAGATAATGTCTGCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTTGTTTAGAGTTACACAGGGGAACTGGTGCTCATCCAGATACTGTCCTCTTTAGGCTTTCCCTTATGGGCTTCCCCATTACGCGTCTACTAGGAAAAGATTTCCACACCCTTATAAAGGGTGTTTCATTATCCTCCCCAACCAATGTGGGATATCACAATCCATTGTTTGGGGAGGAGAACGAAACACCCTTTATAAGGGAGTAGACGCGTTTTAAAAACTTTGAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTGATGGGCCTGGGCCGTTACAATATATGAAGCTTCTTGTATGGTTGCTTTGGTGGGTCTGCACTGTTTTATTTGGTTCAGAAAATTTGCCAACTTCTAGCTCTTATATGTCAGGTACAATGTGGTGAATATGACTTTAATGGTGGTGCTGGTGTTGTCACTACGATTAAGCCAAGTGCTCAAAAGAAGGGAATCAACCGTGTTGAAGATAATTCCCTCAAAGGAGAACATGGAGACGACTTAGTAGACCTCGAAGACAACATGACAACTCCTATAAAGACTACACCAGTTAGACATTCCGAAAGATCTGCTGGGAAAGTATTCAAGTATTACCCGTTGCATATATTGTTACTGTGTGAACATTATGTTATTATCAATAAGGCAGAAAGCAATAGGGTTTCTTGTCAAATAATTTTTTGCATCAAATGTCATTTCATCAGCTGTCCATTCTAGGATTGGTAGAATATTATGCTGCATGACCAAATTATACATGCATGTTTGGTACTTGATTTATGCTTTTAGAAGTTTGAACTTTAAAATCTATTTTTCAAAGAGTTCCACAGGGTTTTAGCTTGTCTTGGATTTTCTTAGGTGTGTTCTATAGGTTTGTGGTGTTTGCTGTTTTGGAGGGGTTTGGTCGGGAAGAAATTGTCTTCAAGAAATGGAAAACTCTTGAGAGGAAGCGAGGGATCTTATTATTTCATAGCCACCTATTAAGCTTCTGATGCTTCCTGAAGCTGAGACTGTGATTGGAAATTAAGAAACTAGCCATTAAAATGTATTACCATATCAAAGGAAAATACATAGGTTTACCAAGAATTCAAGAGGCTTACCGTTCCCTATAAAGCTCGTTAACTAATTATTAATATACCTCTTATAAAAAGAATTAATTATTGATAATACCATTACTAATATTCCTTACAGCTTCTCAGTTTTAAACATTTTTTCAATCATCTTTTCACTTCTATGATCTTAGCTAATTGGGGAGCCTTTTTAACTTTGGCTTTTGGGAGGCTTTTGCCTTGAGTTATGTATTTTGTTAATGAAGAATAACATCAAAATCTGAAAATTTGGTTTTCTACAGTTTCTGCCCAAAAGGTGCAGCTTTCTGGTTCAAAGCGAAAGATTGACCAGGTGATACATCTTATAATTTTTTTTTTTATTCTCCGGGAAATAACCATAATGGATCGTTTTGTATTTTTCAGGACGAAGGATCAAGGAAAAGGAGGGTTGTCCGGGTTCAAGACGATGGTCAATCTCGCATGCTCTCTCTATTTACTTCAGTTATTTCTCAAACAGGCTTATATATTGTCATAATTAGCTTGCTAAGAATTGGTAGTAGATCTAATAGTAGTTTTTCAATTCCACAAGATAGATGTGCATTTTGTATTCCGACTAATTTTCGTTTGCTGTCTAATCGCTACATATAATACATACCTTTATGTTTCCAACCGACTCTCCTAGCGGTAAGTACTTATATTCGGAGTCGGTTCATGCAAATTTGGGTTCTGTAGTTACCTAGTGTAGCATTATAATCGAGCTGATTGAGTTTCTATGTTGTGTTTTACATGGTCAATTGATGTATAGCTGCTCTTTGAATTTGCAGGAGGAAAAGTCACGAGGAAGGATACAGAATATGAGGTATTAGTGCCATTTCTACAAATTGTTCTTTTAAATGATTTGTTGCGTTATTAACTTATGGCTGCAACGACCAGAAGTATCTTAATAGAAATGAACTTAGCTGCTGCTGGTTTCCAAATCAAACTAATCAAAATAGTATTAAGCTTCGGGCCAGTTTCAGATCGGTTCAAGAAAGCTGACTGTGTAGTGAAGAAACCGACTTCTCGAGAGACCAGTAAGCTCTGTCAACTCCTTCTCCCAGCCTAATCAAATCAATCACACAGATCAAACCCAACCAGCTATCAAACTCTATAAAAAATGCTCCAAACCAAGGTCCCGATCATTCTGCTCCGTGTTCCTACACTCGGTGATCGTGGCTTCCTTCTTAAGAGAGATACTGAAAAGGTCTGGAAAGCAAACGTAAACGAATTGTTCCCCACCCACTTGTCACGCAGAACTCGATTCTTTCACCGCAATGAACTTTAAAACTCGCATGGTTGACAAACAGAACACTTTTTTTTAGCAATCTCCACCACCCAATGTCTAGATTTGGAGGCACCTTTAGGAGCAAGGGATAGCCACCCGAGGGGCTCACAGCCTTAAAGACTCGTGATTTCTCTTCTCCACAGAGCGTTTTCTTCTCGAGTGAACCTCCACAGCCATTTTAAGGGCGTTGTTTGTTTGCCTCATGGACCTTATGCCGAGACTCCCTAACAAATTTCTCACTAGAGAGAATCTTAGTGGCCATTCCTTCTTTTGTTTAAGGCTCTAGAAAACTTGCCTCATCATGTTACATGTAAGGGTTCAAAATTTTAATACTCTCTGAATTTGTATCTCTGTAGAATCTACTTCCTTTTGCCATTCACTTGAGTGTGGTATGAAATGGTTAACGGATTAGATCATTGTATACTAAATATGGCTTATCTATATCTCGTAGGTTGAAGATGACATTGAAGAGTTGTCGAGCTCTCAAGAGGTAAGTGTTCACTACCTATTATATAGCCATCTACATACTTCTCCCATGATTTCCAGAATATTGGATTGGAAGTTAGTTGGGCCCTAGGTTTGTACTCATTTTGGAGTCTGATGTAATTATTTGGCTGAACTACTCTTTTGCTAGTAGTAGTACATATAGTCATTTCTCACTTCACTCTTTTAACTACTAATTATTTGGCCTAACCCCTACCCCATGTAATCTTCTTATTATCGTGCCTCGCACCGTGTTTGTCGAAAAGTCGTCATTTCTATATTGGATAATTACCTATTTCATGTAAAGTTAAGAACAAAACATGTTCTCCACATGCCTAAATATAGTTCTCGACCATGATCACCAAAAAGCGTCGACATTATCAATAGATTTCTTGGGTGCAACGCATGTGGTTCGATTGAAGTGTTCGTTATAAGATGAAATCAATCATTCGGGGACTGAATAAATAGTTTTAACTGACCATATTCCTTGAGTTTCTTGTATGAATATTAGATTTGGATCTTGCACAGTTTTACTCACAAGTTTGCTTGTCATTTAGGACACTGATGAAGATTGGACAAGTTGAGGTCGTTACATTACAATGGTAAGCCGCCGCAGCAGCAGCTAGGATGCATTGCAGAGGTTATCATATTCAAAGTAAGAGAATGCTCTACCAGTTTCTTTGAAAAGCTGCTGGCTTACTGAAATTAAAGAAATTTAACCATAAAATAATATTGAAGTCAAGTTTTTACCATGCTGTTAGTCATGTAAAAATTCTGTTTTTGATATACCAGAGAGAAACTGTTACCCTTTTCTTGGGTTTAGAGGAAATTTTCAGCATCGACAAGGTTTGTATGCAATTTATAAACTCTCAATCGTCTGTACTGTATGTATGTATTATGGTATTATGAAATTTTCTATATTTTATGTTAAATTTAGACCTCAACAATATTTACGAGTATTATTAGATATTAAGATATCAAGTAATGAGGTAATT

mRNA sequence

AAGAAGGCTCGAGGGATCCGAGAATAGACAGTGGTGGGTCTGCAGCCCACTGCCAGCATCAGAAATGGCGCGCGGATCATCGTCTTCGAAGACGAACAAAGCGAACGCAGAGCTCGAACCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTTTCCAATAATCTACTTTCAGGAACTCAGGCAAAGCCCCAGGGATGTCTGTGTCCATCCGCAACCGTTCTGAAGCACAATGGCAAAGACATTGTCAAGAAATCTCACCGAAAGAACAGGTTCCTCTTCTCGTTTTCAGGCTTGCTCGCCCCCGTCAGTGGAGGCAAGATTGGTGAGCTCAAGGATTTGGGATCCAAGAATCCAATTCTCTATCTCGAATTTCCTCAGGGACGTATGAAGTTGTTTGGAACTATAATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGAGGAAAGAATGTGACATGTGAAGATTATTTTGATAATATGATTGTCTTTTCGGATGCATGGTGGATTGGAACAAAAGATGAAAATCAAGAGGAGGCTCGTCTCGATTTTCCGAAAGAATTGTCTATGGTACAATGTGGTGAATATGACTTTAATGGTGGTGCTGGTGTTGTCACTACGATTAAGCCAAGTGCTCAAAAGAAGGGAATCAACCGTGTTGAAGATAATTCCCTCAAAGGAGAACATGGAGACGACTTAGTAGACCTCGAAGACAACATGACAACTCCTATAAAGACTACACCAGTTAGACATTCCGAAAGATCTGCTGGGAAAGTATTCAAGTATTACCCGTTGCATATATTGTTACTGTTTGTGGTGTTTGCTGTTTTGGAGGGGTTTGTTTCTGCCCAAAAGGTGCAGCTTTCTGGTTCAAAGCGAAAGATTGACCAGCTGCTCTTTGAATTTGCAGGAGGAAAAGTCACGAGGAAGGATACAGAATATGAGGTTGAAGATGACATTGAAGAGTTGTCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGAGGTCGTTACATTACAATGGTAAGCCGCCGCAGCAGCAGCTAGGATGCATTGCAGAGGTTATCATATTCAAAGTAAGAGAATGCTCTACCAGTTTCTTTGAAAAGCTGCTGGCTTACTGAAATTAAAGAAATTTAACCATAAAATAATATTGAAGTCAAGTTTTTACCATGCTGTTAGTCATGTAAAAATTCTGTTTTTGATATACCAGAGAGAAACTGTTACCCTTTTCTTGGGTTTAGAGGAAATTTTCAGCATCGACAAGGTTTGTATGCAATTTATAAACTCTCAATCGTCTGTACTGTATGTATGTATTATGGTATTATGAAATTTTCTATATTTTATGTTAAATTTAGACCTCAACAATATTTACGAGTATTATTAGATATTAAGATATCAAGTAATGAGGTAATT

Coding sequence (CDS)

ATGGCGCGCGGATCATCGTCTTCGAAGACGAACAAAGCGAACGCAGAGCTCGAACCGGAGATTGCAGCGCGAAAGCGGCTTAAGAAGCTCGCATTTTCCAATAATCTACTTTCAGGAACTCAGGCAAAGCCCCAGGGATGTCTGTGTCCATCCGCAACCGTTCTGAAGCACAATGGCAAAGACATTGTCAAGAAATCTCACCGAAAGAACAGGTTCCTCTTCTCGTTTTCAGGCTTGCTCGCCCCCGTCAGTGGAGGCAAGATTGGTGAGCTCAAGGATTTGGGATCCAAGAATCCAATTCTCTATCTCGAATTTCCTCAGGGACGTATGAAGTTGTTTGGAACTATAATGTATCCGAAGAACAGATATTTGACTTTGCAGTTTTCTAGAGGAGGAAAGAATGTGACATGTGAAGATTATTTTGATAATATGATTGTCTTTTCGGATGCATGGTGGATTGGAACAAAAGATGAAAATCAAGAGGAGGCTCGTCTCGATTTTCCGAAAGAATTGTCTATGGTACAATGTGGTGAATATGACTTTAATGGTGGTGCTGGTGTTGTCACTACGATTAAGCCAAGTGCTCAAAAGAAGGGAATCAACCGTGTTGAAGATAATTCCCTCAAAGGAGAACATGGAGACGACTTAGTAGACCTCGAAGACAACATGACAACTCCTATAAAGACTACACCAGTTAGACATTCCGAAAGATCTGCTGGGAAAGTATTCAAGTATTACCCGTTGCATATATTGTTACTGTTTGTGGTGTTTGCTGTTTTGGAGGGGTTTGTTTCTGCCCAAAAGGTGCAGCTTTCTGGTTCAAAGCGAAAGATTGACCAGCTGCTCTTTGAATTTGCAGGAGGAAAAGTCACGAGGAAGGATACAGAATATGAGGTTGAAGATGACATTGAAGAGTTGTCGAGCTCTCAAGAGGACACTGATGAAGATTGGACAAGTTGA

Protein sequence

MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGKDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPKNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYDFNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAGKVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVEDDIEELSSSQEDTDEDWTS

Homology

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BLAST of Carg06655 vs. NCBI nr
Match: KAG7012176.1 (DNA-binding protein RHL1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637.5 bits (1643), Expect = 6.2e-179
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVE 300
           KVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVE
Sbjct: 241 KVFKYYPLHILLLFVVFAVLEGFVSAQKVQLSGSKRKIDQLLFEFAGGKVTRKDTEYEVE 300

Query: 301 DDIEELSSSQEDTDEDWTS 320
           DDIEELSSSQEDTDEDWTS
Sbjct: 301 DDIEELSSSQEDTDEDWTS 319

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BLAST of Carg06655 vs. NCBI nr
Match: KAG6572993.1 (DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 532.7 bits (1371), Expect = 2.1e-147
Identity = 298/424 (70.28%), Postives = 304/424 (71.70%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVF-----------------------KYYPLH---------------------------- 300
           KVF                       K   +H                            
Sbjct: 241 KVFNFAEASSEDESAGTCDDLSEGEEKNVVIHKPSIGDHASENTEDISVDSKDVDAVEKS 300

Query: 301 -----------------------------ILLLFVVFAVLE----------------GFV 320
                                        IL+   + +  E                  V
Sbjct: 301 PILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSSFEKVEEKRTPRRSKRSSTSKV 360

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BLAST of Carg06655 vs. NCBI nr
Match: XP_022955237.1 (DNA-binding protein RHL1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 531.6 bits (1368), Expect = 4.8e-147
Identity = 299/425 (70.35%), Postives = 306/425 (72.00%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKPSAQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVF------------------------KYYPLH--------------------------- 300
           KVF                        K   +H                           
Sbjct: 241 KVFNFAEASSSEDESAGTCDDLSEGEEKNVVIHEPSIGDHASENTEDISVDSKDVDAVEK 300

Query: 301 ------------------------------ILL---LFVVFAVLE-------------GF 320
                                         IL+   L  +F  +E               
Sbjct: 301 SPILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRRSKRSSTSK 360

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BLAST of Carg06655 vs. NCBI nr
Match: XP_023542520.1 (DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524.6 bits (1350), Expect = 5.8e-145
Identity = 293/424 (69.10%), Postives = 303/424 (71.46%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSATVLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQACLCPSATVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN+EEARLDFPKELSMVQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENREEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKPSAQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVFKYYPLH--------------------------------------------------- 300
           KVF +                                                       
Sbjct: 241 KVFNFAEASSEDESAGTCDDLSEGEEKNVVKHEPSIGDHASENTEEVSLDSKDVDAVEKS 300

Query: 301 -----------------------------ILL---LFVVFAVLE-------------GFV 320
                                        IL+   L  +F  +E               V
Sbjct: 301 PILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRRSKRSSTSKV 360

[Close]

BLAST of Carg06655 vs. NCBI nr
Match: XP_022994237.1 (DNA-binding protein RHL1-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 515.0 bits (1325), Expect = 4.6e-142
Identity = 292/425 (68.71%), Postives = 299/425 (70.35%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQACLCPSAAVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENWEEARLDFPKELSMVHSGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKP AQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPGAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVF------------------------KYYPLH--------------------------- 300
           KVF                        K   +H                           
Sbjct: 241 KVFNFAEASSEEDESAGTCDDLSEGEEKNVVIHEPSIGDHASENTEDISVDSKDVDAVEK 300

Query: 301 ------------------------------ILL---LFVVFAVLE-------------GF 320
                                         IL+   L  +F  +E               
Sbjct: 301 SPILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRRSKRSSTSK 360

[Close]

BLAST of Carg06655 vs. ExPASy Swiss-Prot
Match: O81242 (DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.6e-73
Identity = 145/259 (55.98%), Postives = 178/259 (68.73%), Query Frame = 0


Query: 1   MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNG 60
           M R SSS K  +K   + + E   RKRLK LA  N LLS + AK    L PS  VLKH+G
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYP 120
            DI++KS RKNRFLFSF GLLAP+S   IG+L  L +KNP+LYL FPQGRMKLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEY 180
           KNRYLTLQFSRGGKNV C+DYFDNMIVFS++WWIGTK+EN EEARLDFPKEL+  +  E+
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEF 180

Query: 181 DFNGGAGVVTTIKPSAQKK-GINRVEDNSLK----------GEHGDDLVDLED--NMTTP 240
           DF GGAG   ++K  A  + G    E +S +          GE  DD + +     +T P
Sbjct: 181 DFQGGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPP 240

Query: 241 IKTTPVRHSERSAGKVFKY 246
           ++ TPVR S+R++GK F +
Sbjct: 241 VQVTPVRQSQRNSGKKFNF 259

[Close]

BLAST of Carg06655 vs. ExPASy TrEMBL
Match: A0A6J1GT04 (DNA-binding protein RHL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457259 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.3e-147
Identity = 299/425 (70.35%), Postives = 306/425 (72.00%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKPSAQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVF------------------------KYYPLH--------------------------- 300
           KVF                        K   +H                           
Sbjct: 241 KVFNFAEASSSEDESAGTCDDLSEGEEKNVVIHEPSIGDHASENTEDISVDSKDVDAVEK 300

Query: 301 ------------------------------ILL---LFVVFAVLE-------------GF 320
                                         IL+   L  +F  +E               
Sbjct: 301 SPILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRRSKRSSTSK 360

[Close]

BLAST of Carg06655 vs. ExPASy TrEMBL
Match: A0A6J1JV81 (DNA-binding protein RHL1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111490036 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.2e-142
Identity = 292/425 (68.71%), Postives = 299/425 (70.35%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQACLCPSAAVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENWEEARLDFPKELSMVHSGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKP AQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPGAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVF------------------------KYYPLH--------------------------- 300
           KVF                        K   +H                           
Sbjct: 241 KVFNFAEASSEEDESAGTCDDLSEGEEKNVVIHEPSIGDHASENTEDISVDSKDVDAVEK 300

Query: 301 ------------------------------ILL---LFVVFAVLE-------------GF 320
                                         IL+   L  +F  +E               
Sbjct: 301 SPILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRRSKRSSTSK 360

[Close]

BLAST of Carg06655 vs. ExPASy TrEMBL
Match: A0A6J1K2C7 (DNA-binding protein RHL1-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111490036 PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 6.3e-137
Identity = 280/413 (67.80%), Postives = 287/413 (69.49%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQACLCPSAAVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENWEEARLDFPKELSMVHSGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKP AQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPGAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVF------------------------KYYPLH--------------------------- 300
           KVF                        K   +H                           
Sbjct: 241 KVFNFAEASSEEDESAGTCDDLSEGEEKNVVIHEPSIGDHASENTEDISVDSKDVDAVEK 300

Query: 301 ------------------------------ILL---LFVVFAVLE----------GFVSA 320
                                         IL+   L  +F  +E             S 
Sbjct: 301 SPILQGDQESISKTKRSSRAKGNAQSSNRGILVQPTLHSLFKKVEEKRTPRRSKRSSTSK 360

[Close]

BLAST of Carg06655 vs. ExPASy TrEMBL
Match: A0A6J1GT84 (DNA-binding protein RHL1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457259 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 8.3e-137
Identity = 242/245 (98.78%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKPSAQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPSAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVFKY 246
           KVF +
Sbjct: 241 KVFNF 245

[Close]

BLAST of Carg06655 vs. ExPASy TrEMBL
Match: A0A6J1K0N2 (DNA-binding protein RHL1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490036 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 236/245 (96.33%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNGK 60
           MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQ CLCPSA VLKHNGK
Sbjct: 1   MARGSSSSKTNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQACLCPSAAVLKHNGK 60

Query: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120
           DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK
Sbjct: 61  DIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYPK 120

Query: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEYD 180
           NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDEN EEARLDFPKELSMV  GEYD
Sbjct: 121 NRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENWEEARLDFPKELSMVHSGEYD 180

Query: 181 FNGGAGVVTTIKPSAQKKGINRVEDNSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240
           FNGGAGVVTTIKP AQKKGINRVE+NSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG
Sbjct: 181 FNGGAGVVTTIKPGAQKKGINRVEENSLKGEHGDDLVDLEDNMTTPIKTTPVRHSERSAG 240

Query: 241 KVFKY 246
           KVF +
Sbjct: 241 KVFNF 245

[Close]

BLAST of Carg06655 vs. TAIR 10
Match: AT1G48380.1 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-74
Identity = 145/259 (55.98%), Postives = 178/259 (68.73%), Query Frame = 0


Query: 1   MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNG 60
           M R SSS K  +K   + + E   RKRLK LA  N LLS + AK    L PS  VLKH+G
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYP 120
            DI++KS RKNRFLFSF GLLAP+S   IG+L  L +KNP+LYL FPQGRMKLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMVQCGEY 180
           KNRYLTLQFSRGGKNV C+DYFDNMIVFS++WWIGTK+EN EEARLDFPKEL+  +  E+
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQAENTEF 180

Query: 181 DFNGGAGVVTTIKPSAQKK-GINRVEDNSLK----------GEHGDDLVDLED--NMTTP 240
           DF GGAG   ++K  A  + G    E +S +          GE  DD + +     +T P
Sbjct: 181 DFQGGAGGAASVKKLASPEIGSQPTETDSPEVDNEDVLSEDGEFLDDKIQVTPPVQLTPP 240

Query: 241 IKTTPVRHSERSAGKVFKY 246
           ++ TPVR S+R++GK F +
Sbjct: 241 VQVTPVRQSQRNSGKKFNF 259

[Close]

BLAST of Carg06655 vs. TAIR 10
Match: AT1G48380.2 (root hair initiation protein root hairless 1 (RHL1) )

HSP 1 Score: 261.9 bits (668), Expect = 6.6e-70
Identity = 146/290 (50.34%), Postives = 179/290 (61.72%), Query Frame = 0


Query: 1   MARGSSSSK-TNKANAELEPEIAARKRLKKLAFSNNLLSGTQAKPQGCLCPSATVLKHNG 60
           M R SSS K  +K   + + E   RKRLK LA  N LLS + AK    L PS  VLKH+G
Sbjct: 1   MVRASSSKKGGSKGGDKDDAESKQRKRLKTLALDNQLLSDSPAKSHSSLKPSKQVLKHHG 60

Query: 61  KDIVKKSHRKNRFLFSFSGLLAPVSGGKIGELKDLGSKNPILYLEFPQGRMKLFGTIMYP 120
            DI++KS RKNRFLFSF GLLAP+S   IG+L  L +KNP+LYL FPQGRMKLFGTI+YP
Sbjct: 61  TDIIRKSQRKNRFLFSFPGLLAPISAATIGDLDRLSTKNPVLYLNFPQGRMKLFGTILYP 120

Query: 121 KNRYLTLQFSRGGKNVTCEDYFDNMIVFSDAWWIGTKDENQEEARLDFPKELSMV----- 180
           KNRYLTLQFSRGGKNV C+DYFDNMIVFS++WWIGTK+EN EEARLDFPKEL+ V     
Sbjct: 121 KNRYLTLQFSRGGKNVLCDDYFDNMIVFSESWWIGTKEENPEEARLDFPKELAQVDTFHL 180

Query: 181 --------------------------QCGEYDFNGGAGVVTTIKPSAQKK-GINRVEDNS 240
                                     +  E+DF GGAG   ++K  A  + G    E +S
Sbjct: 181 FLHFLFKTMVATEMFNMIRRILWFQAENTEFDFQGGAGGAASVKKLASPEIGSQPTETDS 240

Query: 241 LK----------GEHGDDLVDLED--NMTTPIKTTPVRHSERSAGKVFKY 246
            +          GE  DD + +     +T P++ TPVR S+R++GK F +
Sbjct: 241 PEVDNEDVLSEDGEFLDDKIQVTPPVQLTPPVQVTPVRQSQRNSGKKFNF 290

The following BLAST results are available for this feature:

BLAST of Carg06655 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012176.1	6.2e-179	100.00	DNA-binding protein RHL1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6572993.1	2.1e-147	70.28	DNA-binding protein RHL1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022955237.1	4.8e-147	70.35	DNA-binding protein RHL1-like isoform X2 [Cucurbita moschata]	[more]
XP_023542520.1	5.8e-145	69.10	DNA-binding protein RHL1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994237.1	4.6e-142	68.71	DNA-binding protein RHL1-like isoform X3 [Cucurbita maxima]	[more]

BLAST of Carg06655 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81242	3.6e-73	55.98	DNA-binding protein RHL1 OS=Arabidopsis thaliana OX=3702 GN=RHL1 PE=1 SV=1	[more]

BLAST of Carg06655 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GT04	2.3e-147	70.35	DNA-binding protein RHL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JV81	2.2e-142	68.71	DNA-binding protein RHL1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1K2C7	6.3e-137	67.80	DNA-binding protein RHL1-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1GT84	8.3e-137	98.78	DNA-binding protein RHL1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1K0N2	1.6e-132	96.33	DNA-binding protein RHL1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Carg06655 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48380.1	2.6e-74	55.98	root hair initiation protein root hairless 1 (RHL1)	[more]
AT1G48380.2	6.6e-70	50.34	root hair initiation protein root hairless 1 (RHL1)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 298..319
IPR038859	DNA-binding protein RHL1	PANTHER	PTHR35698	DNA-BINDING PROTEIN RHL1	coord: 1..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06655-RA	Carg06655-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042023	DNA endoreduplication
molecular_function	GO:0003677	DNA binding