Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACAAGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGTACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCCGGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTATTTTGACCTAAAACGATCTCAAAACGTCCCTGGTCTAAAAGACACATGGATTATCTTTCTCTAACCTTCGTCGTTATGATTAATTAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGCCCCATTCAACGGCTGGCTGTCATCCAGCATCGGTAAGCAAGTATCTCCAACAATTACCCCCTAATTTGTCATCGTTTTAAAGCAATTCTTTAAATGGGAGTTTCACAAATTACAGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACCTACCTCAAGAATGGACATACTGATGAAGAACGAAGCAGAGAACACTGAATCCATTTGTTTTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAATATTAATTTATGCAGAAGGGTGATCTTGGACGAAGAGAATGAAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGTATAGGTTTAGAATAAAGAAGGAAGGGTTGCAGTGGGTGAAGGAAGAAGATGAAGAGGTTGAGAAGAAAAGGACAGGACAGAGATATGTTGTGTCCTACTAATAATAAATCTGTAATTTTGTGCCATAGTGATTTTAGATTTATGTTTTTTTTTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTGTTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTCAA
mRNA sequence
ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACAAGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGTACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCCGGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGCCCCATTCAACGGCTGGCTGTCATCCAGCATCGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACCTACCTCAAGAATGGACATACTGATGAAGAACGAAGCAGAGAACACTGAATCCATTTGTTTTTGCAGGTGTTGGATAAAGAATCCATTAAAGTAGCCAGAACAATATTAATTTATGCAGAAGGGTGATCTTGGACGAAGAGAATGAAAAGGGTGTTCTTAGTTAGATTGAAAATGGCAGTATAGGTTTAGAATAAAGAAGGAAGGGTTGCAGTGGGTGAAGGAAGAAGATGAAGAGGTTGAGAAGAAAAGGACAGGACAGAGATATGTTGTGTCCTACTAATAATAAATCTGTAATTTTGTGCCATAGTGATTTTAGATTTATGTTTTTTTTTTGGGTGAGGGCAAAATTATAAAAAATCCCTCTCTGCCTTGTAATTTTGTTCAATTGTTAATCATATGCTTTAATAAATAATAACATATATTTGATGTGTTCAA
Coding sequence (CDS)
ATGGCCTGCCTTACATATCTGAGATTATTGAGATTTCTGGTTCCACAGGTTCAGAAAGTGGGACAGGATCTAGTACTACAGGCTCTTCGTGCCTCCGCTTGGGAAAGACAAGCCATGGTCGGTTGGTCAGCCCAGCCTCACCGGAAGCCGGACATTCAAAACAGAGAGAGAAACATCGTTAATGTTACCAGCCGGTGCGTTGGAGGCACCGGTAGTTTGTACCACTCTCCATGGATTCCGCCGCATCAAAATCAGCATCCACCACCCAATGCCTCCGCCATGCGTTGTATTCAACCCGCCGGCGGATCTGCCATCAAAAGGGCTTCCTCCGGAACCGGCGTTTTCCTCCCTCGCAGACATGTAAACCCTTCCGACTGCCGCCATAAACAAGGTAGCCCAGCCATTAATTTTACAGAGGAAATGAAAAGCTCCATTCAAGCCCCATTCAACGGCTGGCTGTCATCCAGCATCGATTCCAGAAAGAATCCCCTTCTGCCACTGCCGCCAAGGAGCATCCGAGCAGAGGGAGCCGTAAAACAAGAACTTCACCTACCTCAAGAATGGACATACTGA
Protein sequence
MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
Homology
BLAST of Carg06001 vs. NCBI nr
Match:
KAG7033322.1 (hypothetical protein SDJN02_07377, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 395.6 bits (1015), Expect = 2.4e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
Query: 1 MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIV 60
MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIV
Sbjct: 1 MACLTYLRLLRFLVPQVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIV 60
Query: 61 NVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRH 120
NVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRH
Sbjct: 61 NVTSRCVGGTGSLYHSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRH 120
Query: 121 VNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQ 180
VNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQ
Sbjct: 121 VNPSDCRHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQ 180
Query: 181 ELHLPQEWTY 191
ELHLPQEWTY
Sbjct: 181 ELHLPQEWTY 190
BLAST of Carg06001 vs. NCBI nr
Match:
KAG6602637.1 (hypothetical protein SDJN03_07870, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 367.9 bits (943), Expect = 5.4e-98
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 266
Query: 76 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI
Sbjct: 267 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 326
Query: 136 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY
Sbjct: 327 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 381
BLAST of Carg06001 vs. NCBI nr
Match:
XP_022957513.1 (uncharacterized protein LOC111458886 [Cucurbita moschata])
HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92
Identity = 169/175 (96.57%), Postives = 170/175 (97.14%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQA VGW AQPHRKPDIQ+RERNIVNVTSRCVGGTGSLYH
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWLAQPHRKPDIQSRERNIVNVTSRCVGGTGSLYH 266
Query: 76 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI
Sbjct: 267 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 326
Query: 136 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
NFTEEMKSSIQAPFN WLSSS DSRKNPLLPL PRSIRAEGAVKQELHLPQEWTY
Sbjct: 327 NFTEEMKSSIQAPFNAWLSSSFDSRKNPLLPL-PRSIRAEGAVKQELHLPQEWTY 380
BLAST of Carg06001 vs. NCBI nr
Match:
XP_023515357.1 (uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 340.5 bits (872), Expect = 9.3e-90
Identity = 164/175 (93.71%), Postives = 167/175 (95.43%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQA VGWSAQPHRKP+IQNRERNIV+VTSRC GGTGSLYH
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKPEIQNRERNIVDVTSRCSGGTGSLYH 266
Query: 76 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
S WIPPHQNQHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI
Sbjct: 267 SAWIPPHQNQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 326
Query: 136 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
NFTEEMKSSIQAPFNGWLSSS DSRKNPLLP PR+IRAEGAVK ELHLPQEWTY
Sbjct: 327 NFTEEMKSSIQAPFNGWLSSSFDSRKNPLLP-QPRTIRAEGAVKHELHLPQEWTY 380
BLAST of Carg06001 vs. NCBI nr
Match:
XP_022990001.1 (uncharacterized protein LOC111487028 isoform X1 [Cucurbita maxima])
HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86
Identity = 161/176 (91.48%), Postives = 165/176 (93.75%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR GGTGSL H
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKSEIQNRERNIVNVTSRSGGGTGSLNH 266
Query: 76 SPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPS+CRHKQGSPA
Sbjct: 267 CPWIPPPHQSQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSECRHKQGSPA 326
Query: 136 INFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
INFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP SIRAEGAVKQELHLPQEWTY
Sbjct: 327 INFTEEMKSSNQAPFNGWLSSSVDSRKNPLLPLPRSSIRAEGAVKQELHLPQEWTY 382
BLAST of Carg06001 vs. ExPASy TrEMBL
Match:
A0A6J1H0F4 (uncharacterized protein LOC111458886 OS=Cucurbita moschata OX=3662 GN=LOC111458886 PE=4 SV=1)
HSP 1 Score: 350.1 bits (897), Expect = 5.7e-93
Identity = 169/175 (96.57%), Postives = 170/175 (97.14%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQA VGW AQPHRKPDIQ+RERNIVNVTSRCVGGTGSLYH
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWLAQPHRKPDIQSRERNIVNVTSRCVGGTGSLYH 266
Query: 76 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI
Sbjct: 267 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 326
Query: 136 NFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
NFTEEMKSSIQAPFN WLSSS DSRKNPLLPL PRSIRAEGAVKQELHLPQEWTY
Sbjct: 327 NFTEEMKSSIQAPFNAWLSSSFDSRKNPLLPL-PRSIRAEGAVKQELHLPQEWTY 380
BLAST of Carg06001 vs. ExPASy TrEMBL
Match:
A0A6J1JLQ9 (uncharacterized protein LOC111487028 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 6.1e-87
Identity = 161/176 (91.48%), Postives = 165/176 (93.75%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR GGTGSL H
Sbjct: 207 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKSEIQNRERNIVNVTSRSGGGTGSLNH 266
Query: 76 SPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPS+CRHKQGSPA
Sbjct: 267 CPWIPPPHQSQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSECRHKQGSPA 326
Query: 136 INFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
INFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP SIRAEGAVKQELHLPQEWTY
Sbjct: 327 INFTEEMKSSNQAPFNGWLSSSVDSRKNPLLPLPRSSIRAEGAVKQELHLPQEWTY 382
BLAST of Carg06001 vs. ExPASy TrEMBL
Match:
A0A6J1JS02 (uncharacterized protein LOC111487028 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487028 PE=4 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 6.1e-87
Identity = 161/176 (91.48%), Postives = 165/176 (93.75%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQKVGQDLVLQALRASAWERQA VGWSAQPHRK +IQNRERNIVNVTSR GGTGSL H
Sbjct: 206 QVQKVGQDLVLQALRASAWERQAKVGWSAQPHRKSEIQNRERNIVNVTSRSGGGTGSLNH 265
Query: 76 SPWI-PPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
PWI PPHQ+QHPPPNASAMRCI PAGGSAIKRASSGTGVFLPRRHVNPS+CRHKQGSPA
Sbjct: 266 CPWIPPPHQSQHPPPNASAMRCIHPAGGSAIKRASSGTGVFLPRRHVNPSECRHKQGSPA 325
Query: 136 INFTEEMKSSIQAPFNGWLSSSIDSRKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
INFTEEMKSS QAPFNGWLSSS+DSRKNPLLPLP SIRAEGAVKQELHLPQEWTY
Sbjct: 326 INFTEEMKSSNQAPFNGWLSSSVDSRKNPLLPLPRSSIRAEGAVKQELHLPQEWTY 381
BLAST of Carg06001 vs. ExPASy TrEMBL
Match:
A0A6J1BYQ6 (uncharacterized protein LOC111006679 OS=Momordica charantia OX=3673 GN=LOC111006679 PE=4 SV=1)
HSP 1 Score: 231.5 bits (589), Expect = 2.9e-57
Identity = 119/179 (66.48%), Postives = 136/179 (75.98%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASAWERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLYH 75
QVQ+V DLVLQA+ AS+W RQA V W+A PHRKP+IQNRERNI RC G G LY
Sbjct: 200 QVQQVRHDLVLQAICASSWGRQAKVDWAAPPHRKPEIQNRERNIGLGGGRCSGAAG-LYQ 259
Query: 76 SPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI 135
S W+PP Q+Q PPPNASA+RCI P GG A+KRASSGTGVFLPRR+VNPS+CR KQG+PA+
Sbjct: 260 SAWLPPPQSQPPPPNASAVRCIHP-GGPAVKRASSGTGVFLPRRYVNPSECRQKQGTPAV 319
Query: 136 NFTEEMKSSIQAPFNGWLSSSIDS----RKNPLLPLPPRSIRAEGAVKQELHLPQEWTY 191
F EEM + IQAPFNG LS D+ R LLPL PRS+R E A+ QELHLPQEWTY
Sbjct: 320 RFPEEMINPIQAPFNGCLSPGFDAMLARRNTSLLPL-PRSLRGEAAINQELHLPQEWTY 375
BLAST of Carg06001 vs. ExPASy TrEMBL
Match:
A0A5A7TJ83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001390 PE=4 SV=1)
HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56
Identity = 119/181 (65.75%), Postives = 134/181 (74.03%), Query Frame = 0
Query: 16 QVQKVGQDLVLQALRASA-WERQAMVGWSAQPHRKPDIQNRERNIVNVTSRCVGGTGSLY 75
QVQ+V QDLVLQALRAS+ RQA V WSAQPH K +IQNRERN+VN + RC G G LY
Sbjct: 181 QVQQVKQDLVLQALRASSLGGRQAKVSWSAQPHWKQEIQNRERNVVNASGRCGVGAGGLY 240
Query: 76 HSPWIPPHQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPA 135
HSPW+PP QNQ P PN + +RCI P S +KRASSGTGVFLPRR++NP+DCR KQG P+
Sbjct: 241 HSPWLPPLQNQQPTPNTTVVRCIHPV-RSGVKRASSGTGVFLPRRYINPTDCRQKQGIPS 300
Query: 136 INFTEEMKSSIQAPFNGWLSSSID----SRKNPLLPLPPRSIRAEGAVKQE-LHLPQEWT 191
+ F EEMKS IQAP NG LS D R NPLLPL PRS R EG + QE HLPQEWT
Sbjct: 301 VRFAEEMKSPIQAPLNGCLSPGFDPILSRRNNPLLPL-PRSFRTEGGMNQEHHHLPQEWT 359
BLAST of Carg06001 vs. TAIR 10
Match:
AT5G59050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 43.5 bits (101), Expect = 2.2e-04
Identity = 43/136 (31.62%), Postives = 51/136 (37.50%), Query Frame = 0
Query: 82 HQNQHPPPNASAMRCIQPAGGSAIKRASSGTGVFLPRRHVNPSDCRHKQGSPAI----NF 141
HQNQ P A+ GS + S GTGVFLPR H + R K G +
Sbjct: 181 HQNQRPRSGVKAVF----VDGSGSRTGSGGTGVFLPRGHGTVVESRKKSGCSTVIIPARV 240
Query: 142 TEEMK------------SSIQAPFNGWL-----SSSIDSRKNPLLPLPPRSIRAEGAVKQ 191
E +K SS PF+ L + I S KN L E +
Sbjct: 241 VEALKVHFDKLGVPSTFSSDIPPFHDALLVSMNNKKIKSNKNTSLSRVQSGSPYEMEMSA 300
BLAST of Carg06001 vs. TAIR 10
Match:
AT3G55690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39870.1); Has 76 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 3; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 43.1 bits (100), Expect = 2.9e-04
Identity = 31/94 (32.98%), Postives = 44/94 (46.81%), Query Frame = 0
Query: 103 SAIKRASSGTGVFLPRRHVNPSDC-RHKQGSPAINFTEEMKSSIQAPFNGWLSSSIDSRK 162
+A+K S+GTGVFLPR++ NPSD + K G + + K I+ + +
Sbjct: 207 TAVKSPSTGTGVFLPRKYSNPSDSPKKKSGDGCVKVVNQQKPKIEV-------LPVRCKP 266
Query: 163 NPLLPLPP-RS----IRAEGAVKQELHLPQEWTY 191
N L RS + G +K E L QEW Y
Sbjct: 267 NSKAGLSTGRSKIDYVAGGGCLKHEKPLLQEWMY 293
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7033322.1 | 2.4e-106 | 100.00 | hypothetical protein SDJN02_07377, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6602637.1 | 5.4e-98 | 100.00 | hypothetical protein SDJN03_07870, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_022957513.1 | 1.2e-92 | 96.57 | uncharacterized protein LOC111458886 [Cucurbita moschata] | [more] |
| XP_023515357.1 | 9.3e-90 | 93.71 | uncharacterized protein LOC111779387 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022990001.1 | 1.3e-86 | 91.48 | uncharacterized protein LOC111487028 isoform X1 [Cucurbita maxima] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1H0F4 | 5.7e-93 | 96.57 | uncharacterized protein LOC111458886 OS=Cucurbita moschata OX=3662 GN=LOC1114588... | [more] |
| A0A6J1JLQ9 | 6.1e-87 | 91.48 | uncharacterized protein LOC111487028 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1JS02 | 6.1e-87 | 91.48 | uncharacterized protein LOC111487028 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1BYQ6 | 2.9e-57 | 66.48 | uncharacterized protein LOC111006679 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
| A0A5A7TJ83 | 1.1e-56 | 65.75 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G59050.1 | 2.2e-04 | 31.62 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
| AT3G55690.1 | 2.9e-04 | 32.98 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
