Carg05262 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg05262
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	elongation of fatty acids protein 3-like
Location	Carg_Chr07: 3816030 .. 3816939 (+)
RNA-Seq Expression	Carg05262
Synteny	Carg05262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCCGGAATCATGCCGATCACCGATTTAACCTACTGGCTCTCCGAGCACCCCTCGATCGTCGGATTCCGGTGGAGCCATACCCATTCATGGGGTTCCACTTGGTCCTTCCTCTTCTCCTCTATCGTCTTTTACCTCGCCTTCTCCATCGCCATCCATCTCTTCCTCAGCCTCCTCCTCCGTCCCGGCCGCCCCGTACCTCTCGGCCCCATTCCGGCCATTCATTGTCTCTCCATGGCCCTCATCTCCACTCTAATCTCCGCAGGTATCCTCCTCTCCTCCGCTGCTGAGATCCGCGACACCCGGTGGTTCTGGCGGCGCTCCAAAACTCCCCTTCCAATGGCTCCTCTGTTTCCCTATAGGCACTCGCCCTTCCGGCCGCGTTTTCTTCTGGTCCTACATCTACTATTTGTCTCGATTCTTCCATATGTTCCGCACCATTTTCACCATTCTTCGCCGTCGCGAGCTCTCCTTCTTCCAGCTCTTCAACCACTCGATTTCAACGTTTATGTCGTTCCTCTGGCTTGAATTTTCACAGTCTTTTCAGGTTCTGGCGATTCTCTCGACGTCGCTCCTATACGCAGTGGTTTACGGGTATAGATTTTGGACGGCGATCGGATTGCGGAGGGCGTGTTTCCCTTTTGTTATGAACTGTCAAATTGCGTTGTTGGGTTGCAATCTGGCGTGCCATGTGGGTGTGTTGATGCTGCATTTTATGAAAGGGGGGTGCAATGGAATCGGAGCTTGGGGTTTCAATTCGGTGCTGAATGGAGCCATTTTGCTGCTGTTCTTGAATTTCTATCTCAAAATTCATGTGGGGAAGACGAAGAGTTGTGTGAAGATCATGAAACAGCAGCCCTGTTCTGGGAATTTGGAGGCTGAGAATTTGAAAGAGAAGAATCAATGA

mRNA sequence

ATGAAGGCCGGAATCATGCCGATCACCGATTTAACCTACTGGCTCTCCGAGCACCCCTCGATCGTCGGATTCCGGTGGAGCCATACCCATTCATGGGGTTCCACTTGGTCCTTCCTCTTCTCCTCTATCGTCTTTTACCTCGCCTTCTCCATCGCCATCCATCTCTTCCTCAGCCTCCTCCTCCGTCCCGGCCGCCCCGTACCTCTCGGCCCCATTCCGGCCATTCATTGTCTCTCCATGGCCCTCATCTCCACTCTAATCTCCGCAGGCACTCGCCCTTCCGGCCGCGTTTTCTTCTGGTCCTACATCTACTATTTGTCTCGATTCTTCCATATGTTCCGCACCATTTTCACCATTCTTCGCCGTCGCGAGCTCTCCTTCTTCCAGCTCTTCAACCACTCGATTTCAACGTTTATGTCGTTCCTCTGGCTTGAATTTTCACAGTCTTTTCAGGTTCTGGCGATTCTCTCGACGTCGCTCCTATACGCAGTGGTTTACGGGTATAGATTTTGGACGGCGATCGGATTGCGGAGGGCGTGTTTCCCTTTTGTTATGAACTGTCAAATTGCGTTGTTGGGTTGCAATCTGGCGTGCCATGTGGGTGTGTTGATGCTGCATTTTATGAAAGGGGGGTGCAATGGAATCGGAGCTTGGGGTTTCAATTCGGTGCTGAATGGAGCCATTTTGCTGCTGTTCTTGAATTTCTATCTCAAAATTCATGTGGGGAAGACGAAGAGTTGTGTGAAGATCATGAAACAGCAGCCCTGTTCTGGGAATTTGGAGGCTGAGAATTTGAAAGAGAAGAATCAATGA

Coding sequence (CDS)

ATGAAGGCCGGAATCATGCCGATCACCGATTTAACCTACTGGCTCTCCGAGCACCCCTCGATCGTCGGATTCCGGTGGAGCCATACCCATTCATGGGGTTCCACTTGGTCCTTCCTCTTCTCCTCTATCGTCTTTTACCTCGCCTTCTCCATCGCCATCCATCTCTTCCTCAGCCTCCTCCTCCGTCCCGGCCGCCCCGTACCTCTCGGCCCCATTCCGGCCATTCATTGTCTCTCCATGGCCCTCATCTCCACTCTAATCTCCGCAGGCACTCGCCCTTCCGGCCGCGTTTTCTTCTGGTCCTACATCTACTATTTGTCTCGATTCTTCCATATGTTCCGCACCATTTTCACCATTCTTCGCCGTCGCGAGCTCTCCTTCTTCCAGCTCTTCAACCACTCGATTTCAACGTTTATGTCGTTCCTCTGGCTTGAATTTTCACAGTCTTTTCAGGTTCTGGCGATTCTCTCGACGTCGCTCCTATACGCAGTGGTTTACGGGTATAGATTTTGGACGGCGATCGGATTGCGGAGGGCGTGTTTCCCTTTTGTTATGAACTGTCAAATTGCGTTGTTGGGTTGCAATCTGGCGTGCCATGTGGGTGTGTTGATGCTGCATTTTATGAAAGGGGGGTGCAATGGAATCGGAGCTTGGGGTTTCAATTCGGTGCTGAATGGAGCCATTTTGCTGCTGTTCTTGAATTTCTATCTCAAAATTCATGTGGGGAAGACGAAGAGTTGTGTGAAGATCATGAAACAGCAGCCCTGTTCTGGGAATTTGGAGGCTGAGAATTTGAAAGAGAAGAATCAATGA

Protein sequence

MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLLRPGRPVPLGPIPAIHCLSMALISTLISAGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFMKGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEKNQ

Homology

[Close]

BLAST of Carg05262 vs. NCBI nr
Match: KAG7027099.1 (Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 541.2 bits (1393), Expect = 5.1e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL 120
           LRPGRPVPLGPIPAIHCLSMALISTLISAGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL 120

Query: 121 RRRELSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSLLYAVVYGYRFWTAIGLRRAC 180
           RRRELSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSLLYAVVYGYRFWTAIGLRRAC
Sbjct: 121 RRRELSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSLLYAVVYGYRFWTAIGLRRAC 180

Query: 181 FPFVMNCQIALLGCNLACHVGVLMLHFMKGGCNGIGAWGFNSVLNGAILLLFLNFYLKIH 240
           FPFVMNCQIALLGCNLACHVGVLMLHFMKGGCNGIGAWGFNSVLNGAILLLFLNFYLKIH
Sbjct: 181 FPFVMNCQIALLGCNLACHVGVLMLHFMKGGCNGIGAWGFNSVLNGAILLLFLNFYLKIH 240

Query: 241 VGKTKSCVKIMKQQPCSGNLEAENLKEKNQ 271
           VGKTKSCVKIMKQQPCSGNLEAENLKEKNQ
Sbjct: 241 VGKTKSCVKIMKQQPCSGNLEAENLKEKNQ 270

[Close]

BLAST of Carg05262 vs. NCBI nr
Match: XP_023518252.1 (elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.1 bits (1346), Expect = 1.4e-144
Identity = 269/302 (89.07%), Postives = 269/302 (89.07%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGRPVPLGPIPAIHCLSMALISTLISA                               
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 271
           KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLE ENLKEK
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEGENLKEK 300

[Close]

BLAST of Carg05262 vs. NCBI nr
Match: XP_022962893.1 (elongation of fatty acids protein 3-like [Cucurbita moschata])

HSP 1 Score: 522.3 bits (1344), Expect = 2.5e-144
Identity = 269/302 (89.07%), Postives = 269/302 (89.07%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLA SIAIHLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGRPVPLGPIPAIHCLSMALISTLISA                               
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 271
           KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 300

[Close]

BLAST of Carg05262 vs. NCBI nr
Match: KAG6595084.1 (Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 522.3 bits (1344), Expect = 2.5e-144
Identity = 269/302 (89.07%), Postives = 269/302 (89.07%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGRPVPLGPIPAIHCLSMALISTLISA                               
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 IGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 271
           KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGN EAENLKEK
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNSEAENLKEK 300

[Close]

BLAST of Carg05262 vs. NCBI nr
Match: XP_023004077.1 (elongation of fatty acids protein 3-like [Cucurbita maxima])

HSP 1 Score: 515.4 bits (1326), Expect = 3.0e-142
Identity = 265/302 (87.75%), Postives = 268/302 (88.74%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           M+AGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL
Sbjct: 1   MQAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGRPVPLGPIPAIHCLSMALISTLISA                               
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRR+LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRQLSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 271
           KGGCNGI AWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLE E+LKEK
Sbjct: 241 KGGCNGIRAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEVEHLKEK 300

[Close]

BLAST of Carg05262 vs. ExPASy Swiss-Prot
Match: Q9SYY4 (Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.8e-81
Identity = 158/282 (56.03%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 8   ITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLLRPGRPV 67
           I  +TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI  Y+A S ++H+ LS + R  R V
Sbjct: 6   INSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRSV 65

Query: 68  PLGPIPAIHCLSMALISTLISA----------------------------------GTRP 127
           PLG IP IH L M+++S  I A                                  GTRP
Sbjct: 66  PLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRP 125

Query: 128 SGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQSFQVL 187
           SGRVFFWSY++YL+RF HMFRTIF +LR R L+  QLF +S+  F SFLWLEFSQS+Q+L
Sbjct: 126 SGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQIL 185

Query: 188 AILSTSLLYAVVYGYRFWTAIGLRRACFP-FVMNCQIALLGCNLACHVGVLMLHFMKGGC 247
           AILST+L+Y+VVYGYRFWT  GL  + FP FV+NCQ+ L+GCNL  H GVL +H  KGGC
Sbjct: 186 AILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGGC 245

Query: 248 NGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQ 255
           NGIGAWG NSVLNGAILLLFLNFY+++H    +   K+  Q+
Sbjct: 246 NGIGAWGLNSVLNGAILLLFLNFYVRMHSPMRRHINKMNSQR 287

[Close]

BLAST of Carg05262 vs. ExPASy Swiss-Prot
Match: Q54CJ4 (Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.7e-05
Identity = 62/241 (25.73%), Postives = 110/241 (45.64%), Query Frame = 0


Query: 40  FSSIVFYLAFS---IAIHLFLSLLLRPGRPVPLGPIPAIHCLSMALISTLISAG------ 99
           FS+I+F +  S   +A+   L + ++  + + L      H L + L+S L+  G      
Sbjct: 32  FSNILFPIVCSFGYLALIYGLQIFMKNKKEIKLHGFAMFHNLFLCLLSLLMFLGIVIPMA 91

Query: 100 ------------TRP--SGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSIS 159
                        +P  SG V F  YI+YLS+ +    TI  +LR++ L F  +++H I+
Sbjct: 92  KYSFPHGLYNIICKPIDSGLVQFSYYIFYLSKVYEFIDTIIQVLRKKSLLFLHVWHHFIT 151

Query: 160 TFMSFLWLEFSQSFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNL 219
            ++ +  L++    Q + I +   ++ V+Y Y F T  G+       +  CQI     ++
Sbjct: 152 LWLVWANLKYDTGCQWVDISANCFVHIVMYFYYFQTERGINPWWKKHITTCQIIQFIVDM 211

Query: 220 ACHVGVLMLHF--MKGGCNG---IGAW---GFNSVLNGAILLLFLNFYLKIHVGKTKSCV 250
           + H   L  HF   +G  N     G W    F+  +  + L LF+ F++K +  K KS +
Sbjct: 212 SSH---LAWHFYDTQGNHNSNYCSGTWATSAFSDFVILSFLGLFIQFFVKAY--KKKSSI 267

[Close]

BLAST of Carg05262 vs. ExPASy TrEMBL
Match: A0A6J1HG46 (elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463259 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.2e-144
Identity = 269/302 (89.07%), Postives = 269/302 (89.07%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLA SIAIHLFLSLL
Sbjct: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLALSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGRPVPLGPIPAIHCLSMALISTLISA                               
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 271
           KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK
Sbjct: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 300

[Close]

BLAST of Carg05262 vs. ExPASy TrEMBL
Match: A0A6J1KPE4 (elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497497 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 265/302 (87.75%), Postives = 268/302 (88.74%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           M+AGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL
Sbjct: 1   MQAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGRPVPLGPIPAIHCLSMALISTLISA                               
Sbjct: 61  LRPGRPVPLGPIPAIHCLSMALISTLISAGILLSSAAEIRDTRWFWRRSKTPLQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRR+LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRQLSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM
Sbjct: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEAENLKEK 271
           KGGCNGI AWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLE E+LKEK
Sbjct: 241 KGGCNGIRAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQPCSGNLEVEHLKEK 300

[Close]

BLAST of Carg05262 vs. ExPASy TrEMBL
Match: A0A6J1BT67 (elongation of fatty acids protein 3-like OS=Momordica charantia OX=3673 GN=LOC111005330 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.8e-124
Identity = 237/308 (76.95%), Postives = 252/308 (81.82%), Query Frame = 0


Query: 6   MPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLLRPGR 65
           MPI DLTYWLSEHPSIVGFRWSH+HSWGSTWSFLFSSI FYL FS A+HLFL LLLRPGR
Sbjct: 1   MPIKDLTYWLSEHPSIVGFRWSHSHSWGSTWSFLFSSIAFYLVFSTALHLFLCLLLRPGR 60

Query: 66  PVPLGPIPAIHCLSMALISTLISA--------------------------------GTRP 125
           PVPLGPIPAIHCLSMALIS LISA                                GTRP
Sbjct: 61  PVPLGPIPAIHCLSMALISALISAGILLSSAAEIRDTRWFWRRSKTPFQWLLCFPLGTRP 120

Query: 126 SGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQSFQVL 185
           SGRVFFWSYIYYLSRFFHMFR+IFTILRRR+LSFF LFNHSISTFMSF+WLEFSQSFQVL
Sbjct: 121 SGRVFFWSYIYYLSRFFHMFRSIFTILRRRKLSFFHLFNHSISTFMSFMWLEFSQSFQVL 180

Query: 186 AILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFMKGGCN 245
           AILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQI L+GCNLACHVGVLMLHFMKGGCN
Sbjct: 181 AILSTSMVYAVVYGYRFWTAIGLRRACFPFVVNCQIVLMGCNLACHVGVLMLHFMKGGCN 240

Query: 246 GIGAWGFNSVLNGAILLLFLNFYLKIHVGKTK-----SCVKIMKQQPCSGNL-----EAE 271
           GIGAW FNSVLNGA+LLLFLNFYLKIH G  K     SC++ +KQ+PCSGNL     EAE
Sbjct: 241 GIGAWSFNSVLNGAVLLLFLNFYLKIHRGMGKKMADSSCLQAIKQKPCSGNLENQSMEAE 300

[Close]

BLAST of Carg05262 vs. ExPASy TrEMBL
Match: A0A0A0KL12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.6e-123
Identity = 236/314 (75.16%), Postives = 251/314 (79.94%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           M +GI+PI D TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLA S A+HLFL+LL
Sbjct: 1   MSSGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAISTALHLFLTLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGR VPLGPIPAIH LSMALISTLISA                               
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL RR LSFFQLFNHSISTFMSF+WLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFMWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVL+LHFM
Sbjct: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMK----QQPCSGNL---- 269
           KGGCNGIGAW FNSVLNGAILLLFLNFYLKIH+G T+  VKI+K    Q PCSGNL    
Sbjct: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPPCSGNLKNQS 300

[Close]

BLAST of Carg05262 vs. ExPASy TrEMBL
Match: A0A1S3B0F3 (elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 7.5e-123
Identity = 237/314 (75.48%), Postives = 249/314 (79.30%), Query Frame = 0


Query: 1   MKAGIMPITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLL 60
           M  GI+PI D TYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSI FYLAFS A+HLFL+LL
Sbjct: 1   MSPGIIPINDFTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIAFYLAFSTALHLFLTLL 60

Query: 61  LRPGRPVPLGPIPAIHCLSMALISTLISA------------------------------- 120
           LRPGR VPLGPIPAIH LSMALISTLISA                               
Sbjct: 61  LRPGRSVPLGPIPAIHSLSMALISTLISAGILLSSLAEIRDTRWFWRRSKTPFQWLLCFP 120

Query: 121 -GTRPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQ 180
            GTRPSGRVFFWSYIYYLSRFFHMFRTIFTIL RR LSFFQLFNHSISTFMSFLWLEFSQ
Sbjct: 121 LGTRPSGRVFFWSYIYYLSRFFHMFRTIFTILLRRRLSFFQLFNHSISTFMSFLWLEFSQ 180

Query: 181 SFQVLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFM 240
           SFQVLAILSTS++YAVVYGYRFWTAIGLRRACFPFV+NCQ  LLGCNLACHVGVL+LHFM
Sbjct: 181 SFQVLAILSTSVVYAVVYGYRFWTAIGLRRACFPFVVNCQFVLLGCNLACHVGVLLLHFM 240

Query: 241 KGGCNGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMK----QQPCSGNL---- 269
           KGGCNGIGAW FNSVLNGAILLLFLNFYLKIH+G T+  VKI+K    Q  CSGNL    
Sbjct: 241 KGGCNGIGAWSFNSVLNGAILLLFLNFYLKIHLGDTEDSVKIIKHHHHQPACSGNLKNQS 300

[Close]

BLAST of Carg05262 vs. TAIR 10
Match: AT4G36830.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 302.0 bits (772), Expect = 4.9e-82
Identity = 158/282 (56.03%), Postives = 194/282 (68.79%), Query Frame = 0


Query: 8   ITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLLRPGRPV 67
           I  +TY+LSEHP IVGFRWS++ SWGSTWSFLF+SI  Y+A S ++H+ LS + R  R V
Sbjct: 6   INSITYFLSEHPYIVGFRWSNSQSWGSTWSFLFTSISLYIAVSSSLHILLSAVRRSNRSV 65

Query: 68  PLGPIPAIHCLSMALISTLISA----------------------------------GTRP 127
           PLG IP IH L M+++S  I A                                  GTRP
Sbjct: 66  PLGHIPEIHSLLMSILSATIFAGILLSAAAEIRDTRWLWRRSKTATPLQWLLCFPLGTRP 125

Query: 128 SGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQSFQVL 187
           SGRVFFWSY++YL+RF HMFRTIF +LR R L+  QLF +S+  F SFLWLEFSQS+Q+L
Sbjct: 126 SGRVFFWSYVFYLTRFLHMFRTIFAVLRSRRLAVSQLFCNSVMAFTSFLWLEFSQSYQIL 185

Query: 188 AILSTSLLYAVVYGYRFWTAIGLRRACFP-FVMNCQIALLGCNLACHVGVLMLHFMKGGC 247
           AILST+L+Y+VVYGYRFWT  GL  + FP FV+NCQ+ L+GCNL  H GVL +H  KGGC
Sbjct: 186 AILSTTLVYSVVYGYRFWTGFGLPGSAFPSFVVNCQLVLVGCNLVSHAGVLTMHLFKGGC 245

Query: 248 NGIGAWGFNSVLNGAILLLFLNFYLKIHVGKTKSCVKIMKQQ 255
           NGIGAWG NSVLNGAILLLFLNFY+++H    +   K+  Q+
Sbjct: 246 NGIGAWGLNSVLNGAILLLFLNFYVRMHSPMRRHINKMNSQR 287

[Close]

BLAST of Carg05262 vs. TAIR 10
Match: AT1G75000.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 270.0 bits (689), Expect = 2.0e-72
Identity = 147/276 (53.26%), Postives = 181/276 (65.58%), Query Frame = 0


Query: 8   ITDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLL---RPG 67
           +T   Y+L+EHP+IV FRWS T S+ STWSFLF+++  Y+  ++ +HL L + L      
Sbjct: 1   MTTFNYYLAEHPTIVNFRWSPTQSYASTWSFLFTAVSSYIIAAVTLHLLLLITLSLSNRR 60

Query: 68  RPVPLGPIPAIHCLSMALISTLI---------------------------------SAGT 127
           R   LGPIPA+H L++++IS +I                                   GT
Sbjct: 61  RGFSLGPIPALHSLTISIISAVIFVGILLSAAAEIRDTRWLWRRTRTTALQWFLCFPVGT 120

Query: 128 RPSGRVFFWSYIYYLSRFFHMFRTIFTILRRRELSFFQLFNHSISTFMSFLWLEFSQSFQ 187
           R SGRVFFWSY +YLSRF H+FRT F+++RRR+LSFFQL N S    +SFLWLE+SQSFQ
Sbjct: 121 RASGRVFFWSYAFYLSRFLHLFRTFFSVIRRRKLSFFQLINQSSLLCISFLWLEYSQSFQ 180

Query: 188 VLAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFMK-G 247
           V+AIL T++ YAVVYGYRFWT IGLR ACFPFV NCQ  LLGC   CHVGVL +H +K G
Sbjct: 181 VVAILLTTVSYAVVYGYRFWTEIGLRGACFPFVGNCQAILLGCMTVCHVGVLCIHLVKRG 240

[Close]

BLAST of Carg05262 vs. TAIR 10
Match: AT3G06470.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-27
Identity = 82/271 (30.26%), Postives = 129/271 (47.60%), Query Frame = 0


Query: 9   TDLTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLLRPG---- 68
           + LTYWL  HP I  F W    + GST        VF+++  ++++L  + LLR      
Sbjct: 6   SSLTYWLVNHPYISNFTWIEGETLGST--------VFFVSVVVSVYLSATFLLRSAIDSL 65

Query: 69  ---RPVPLGPIPAIHCLSMALISTLISAG---------------------------TRPS 128
               P  L PI A+H L + L+S +++ G                            +P+
Sbjct: 66  PSLSPRILKPITAVHSLILCLLSLVMAVGCTLSITSSHASSDPMARFLHAICFPVDVKPN 125

Query: 129 GRVFFWSYIYYLSRFFHMFRTIFTILRR--RELSFFQLFNHSISTFMSFLWLEFSQSFQV 188
           G +FFW+ ++YLS+      TI  IL +  + LSF  +++H+    M +LWL   QS   
Sbjct: 126 GPLFFWAQVFYLSKILEFGDTILIILGKSIQRLSFLHVYHHATVVVMCYLWLRTRQSMFP 185

Query: 189 LAILSTSLLYAVVYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVGVLMLHFMKGGC 244
           +A+++ S ++ ++YGY F  A+G R      V +CQI     +      +L  H    GC
Sbjct: 186 IALVTNSTVHVIMYGYYFLCAVGSRPKWKRLVTDCQIVQFVFSFGLSGWMLREHLFGSGC 245

[Close]

BLAST of Carg05262 vs. TAIR 10
Match: AT3G06460.1 (GNS1/SUR4 membrane protein family )

HSP 1 Score: 106.3 bits (264), Expect = 3.9e-23
Identity = 78/263 (29.66%), Postives = 121/263 (46.01%), Query Frame = 0


Query: 11  LTYWLSEHPSIVGFRWSHTHSWGSTWSFLFSSIVFYLAFSIAIHLFLSLLLRPGRPVPLG 70
           LTYWL  HP I  F W+   + GST  F+F  +  YL+ +  +   +  L   G P  L 
Sbjct: 8   LTYWLVHHPYIANFTWTEGETLGSTVFFVFVVVSLYLSATFLLRYTVDSLPTLG-PRILK 67

Query: 71  PIPAIHCLSMALISTLISAG------------------------TRPSGRVFFWSYIYYL 130
           PI A+H L + L+S  ++ G                         +P G +FFW+ ++YL
Sbjct: 68  PITAVHSLILFLLSLTMAVGCTLSLISSSDPKARLFDAVCFPLDVKPKGPLFFWAQVFYL 127

Query: 131 SRFFHMFRTIFTILRR--RELSFFQLFNHSISTFMSFLWLEFSQSFQVLAILSTSLLYAV 190
           S+      T+  IL +  + LSF  +++H+    + +LWL   QS   + ++  S ++ +
Sbjct: 128 SKILEFVDTLLIILNKSIQRLSFLHVYHHATVVILCYLWLRTRQSMFPVGLVLNSTVHVI 187

Query: 191 VYGYRFWTAIGLRRACFPFVMNCQIALLGCNLACHVG-VLMLHFMKGGCNGIGAWGFNSV 247
           +YGY F  AIG R      V N Q+      +      +L  H+   GC GI    FN V
Sbjct: 188 MYGYYFLCAIGSRPKWKKLVTNFQMVQFAFGMGLGAAWMLPEHYFGSGCAGIWTVYFNGV 247

The following BLAST results are available for this feature:

BLAST of Carg05262 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027099.1	5.1e-150	100.00	Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperm...	[more]
XP_023518252.1	1.4e-144	89.07	elongation of fatty acids protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962893.1	2.5e-144	89.07	elongation of fatty acids protein 3-like [Cucurbita moschata]	[more]
KAG6595084.1	2.5e-144	89.07	Elongation of fatty acids protein 3-like protein, partial [Cucurbita argyrosperm...	[more]
XP_023004077.1	3.0e-142	87.75	elongation of fatty acids protein 3-like [Cucurbita maxima]	[more]

BLAST of Carg05262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYY4	6.8e-81	56.03	Elongation of fatty acids protein 3-like OS=Arabidopsis thaliana OX=3702 GN=HOS3...	[more]
Q54CJ4	4.7e-05	25.73	Elongation of fatty acids protein A OS=Dictyostelium discoideum OX=44689 GN=eloA...	[more]

BLAST of Carg05262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG46	1.2e-144	89.07	elongation of fatty acids protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KPE4	1.5e-142	87.75	elongation of fatty acids protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1BT67	6.8e-124	76.95	elongation of fatty acids protein 3-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KL12	2.6e-123	75.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487670 PE=4 SV=1	[more]
A0A1S3B0F3	7.5e-123	75.48	elongation of fatty acids protein 3-like OS=Cucumis melo OX=3656 GN=LOC103484706...	[more]

BLAST of Carg05262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36830.1	4.9e-82	56.03	GNS1/SUR4 membrane protein family	[more]
AT1G75000.1	2.0e-72	53.26	GNS1/SUR4 membrane protein family	[more]
AT3G06470.1	3.4e-27	30.26	GNS1/SUR4 membrane protein family	[more]
AT3G06460.1	3.9e-23	29.66	GNS1/SUR4 membrane protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002076	ELO family	PFAM	PF01151	ELO	coord: 93..245 e-value: 5.6E-23 score: 81.8
IPR002076	ELO family	PANTHER	PTHR11157	FATTY ACID ACYL TRANSFERASE-RELATED	coord: 89..249 coord: 10..91
None	No IPR available	PANTHER	PTHR11157:SF11	ELONGATION OF FATTY ACIDS PROTEIN 3-LIKE	coord: 89..249 coord: 10..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg05262-RA	Carg05262-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034625	fatty acid elongation, monounsaturated fatty acid
biological_process	GO:0034626	fatty acid elongation, polyunsaturated fatty acid
biological_process	GO:0019367	fatty acid elongation, saturated fatty acid
biological_process	GO:0030148	sphingolipid biosynthetic process
biological_process	GO:0042761	very long-chain fatty acid biosynthetic process
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009922	fatty acid elongase activity