Homology
BLAST of Carg04985 vs. NCBI nr
Match:
KAG7025356.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1106.3 bits (2860), Expect = 0.0e+00
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFT 540
VSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFT
Sbjct: 481 VSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFT 540
Query: 541 GMRRSP 547
GMRRSP
Sbjct: 541 GMRRSP 546
BLAST of Carg04985 vs. NCBI nr
Match:
KAG6592948.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1011.9 bits (2615), Expect = 2.1e-291
Identity = 497/498 (99.80%), Postives = 498/498 (100.00%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVV 499
VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498
BLAST of Carg04985 vs. NCBI nr
Match:
XP_022959953.1 (pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata] >XP_022959954.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata] >XP_022959955.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata])
HSP 1 Score: 1010.0 bits (2610), Expect = 7.8e-291
Identity = 496/498 (99.60%), Postives = 497/498 (99.80%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACKLLEEMVIKSHWPCSNTFNTL RGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLTRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVV 499
VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498
BLAST of Carg04985 vs. NCBI nr
Match:
XP_023514107.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1005.0 bits (2597), Expect = 2.5e-289
Identity = 493/498 (99.00%), Postives = 495/498 (99.40%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLK+PKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCR G STVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRAGNSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
EACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 IEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVV 499
VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498
BLAST of Carg04985 vs. NCBI nr
Match:
XP_023004266.1 (pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004267.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004268.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004269.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004270.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima])
HSP 1 Score: 1000.3 bits (2585), Expect = 6.2e-288
Identity = 492/501 (98.20%), Postives = 495/501 (98.80%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLK+PKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCR GKSTVAMEFLKKM KQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVVMII 502
VSSLCFNVA T MWSKV+ I
Sbjct: 481 VSSLCFNVAGTFMWSKVLQQI 501
BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match:
Q9SYK1 (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)
HSP 1 Score: 560.8 bits (1444), Expect = 1.7e-158
Identity = 270/488 (55.33%), Postives = 366/488 (75.00%), Query Frame = 0
Query: 3 VRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRIS 62
VRWPR+LTP+ LSQI++KQ NP TA +LF EAK R+P+Y HNG VYA MI+ILG S R+
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63
Query: 63 EMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLL 122
EM+ VI++MK DSC+CKDS+F+ I+T++ G LE+ ISLFKSL FNC + + +F+TLL
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 123 EILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC 182
+ ++ ES+L+AAC +F++ +GWEV SR +LNLLM+ LCQ +S+LA VF+EM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 183 YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIE 242
YP+R SY ILMKG C +GKL EA HLLYSMFWRIS++GSG DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 243 QAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCA 302
A+EILGKIL+KGLKAPKR ++ I+ + S + +K L+ E LI+G IP DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 303 MAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKG 362
MA DL+ E + +G++V+ M +KGF P +Y AK ALC+ GK+ +AV VI +E ++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 363 SCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTE 422
C+PTV +YN+++ GLC GKS A+ +LKKM KQV VA++ETY TLV GLCR+ ++ E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 423 ACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVS 482
A +++EEM+IKSH+P T++ +I+GLC + + Y+AVM LEEM+SQ +PE SVW AL
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 483 SLCFNVAD 491
S+CF D
Sbjct: 484 SVCFCAID 491
BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 7.2e-45
Identity = 122/548 (22.26%), Postives = 243/548 (44.34%), Query Frame = 0
Query: 9 LTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVI 68
L P H++ +I+ Q +P A ++FN + + ++H Y ++I LG G+ M EV+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64
Query: 69 DQMKVD-SCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLN 128
M+ + + ++ A+K Y G ++E +++F+ + ++C ++N ++ +L++
Sbjct: 65 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124
Query: 129 ESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC----- 188
D A +++ + + S + M+S C+ + AL + M Q C
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184
Query: 189 ------------------------------------------------------------ 248
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 244
Query: 249 -----YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCD 308
PN +Y + ++GLCQ G+L A+ ++ + +G D++ Y L++ LC
Sbjct: 245 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI----EQGPKPDVITYNNLIYGLCK 304
Query: 309 NGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSS 368
N + ++A LGK++ +GL+ + + YC+ + + E ++ +A+ G +P
Sbjct: 305 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE--RIVGDAVFNGFVPDQ 364
Query: 369 DSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEE 428
+Y ++ L +E ET++ + + L KG P +Y L +G + +A ++ E
Sbjct: 365 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 424
Query: 429 ETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRE 486
+ KG +P V +NI++NGLC++G + A +K M+ + G D T++ L+HG +
Sbjct: 425 MSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQ 484
BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.2e-44
Identity = 130/541 (24.03%), Postives = 250/541 (46.21%), Query Frame = 0
Query: 10 TPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVID 69
T L +R Q + A +LFN A + PN+ +Y ++ LG SG +M+++++
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108
Query: 70 QMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFK-SLGGFNCTDRTQTFNTLLEILLNE 129
MK C+ S F I++YA L +E +S+ + F T +N +L +L++
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168
Query: 130 SQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLC-------------------------- 189
+ L ++ W +K + N+L+++LC
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228
Query: 190 ---------QRGQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMF 249
+ G + AL + ++M C + +S +++ G C++G++ +A++ + M
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288
Query: 250 WRISRRGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRI 309
++ G D + TL+ LC G ++ A+EI+ +L++G + + C++
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348
Query: 310 SKLTVTEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSS 369
+ V E ++++ + + P++ +Y + L EN+ ++ ++ + +KG P
Sbjct: 349 GE--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 408
Query: 370 VYEAKAAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKK 429
+ + LC A+++ EE KG C P YN++++ LC GK A+ LK+
Sbjct: 409 TFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 468
Query: 430 MVKQVGLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVG 489
M + G TY+TL+ G C+ N+ EA ++ +EM + S T+NTLI GLC
Sbjct: 469 M-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 528
Query: 490 KPYKAVMCLEEMISQGQLPELSVWNALVSSLCFNVADTDMWSKVVMIILGYAREPLIDTL 515
+ A +++MI +GQ P+ +N+L++ C D + +V + EP I T
Sbjct: 529 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKAADIVQAMTSNGCEPDIVTY 579
BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match:
O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.3e-42
Identity = 109/444 (24.55%), Postives = 216/444 (48.65%), Query Frame = 0
Query: 49 AAMINILGNSGRISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLF-KSLG 108
++MI NSG + +++ ++++++ + F + Y L ++ + LF + +
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 109 GFNCTDRTQTFNTLLEILLNESQLDAACQLFQ---QSSFGWEVKSRTQSLNLLMQSLCQR 168
F C ++FN++L +++NE + + S+ + S NL++++LC+
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 169 GQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGD 228
+ A+ VF+ M + C P+ +Y LM GLC++ ++ EA+ LL M G
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPS 260
Query: 229 IVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCL 288
VIY L+ LC G++ + +++ + KG + + + C KL + L
Sbjct: 261 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSL 320
Query: 289 INEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCK 348
+ + IP+ +Y + L + +++S M +G+ +Y + L K
Sbjct: 321 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 380
Query: 349 EGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADK 408
EGK ++A+ + + KG C P + +Y+++++GLCR GK A E L +M+ G + +
Sbjct: 381 EGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNA 440
Query: 409 ETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNT---FNTLIRGLCSVGKPYKAVMC 468
TYS+L+ G + EA ++ +EM CS ++ LI GLC VG+ +A+M
Sbjct: 441 YTYSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 500
Query: 469 LEEMISQGQLPELSVWNALVSSLC 486
+M++ G P+ +++++ LC
Sbjct: 501 WSKMLTIGIKPDTVAYSSIIKGLC 513
BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 162.2 bits (409), Expect = 1.7e-38
Identity = 109/446 (24.44%), Postives = 197/446 (44.17%), Query Frame = 0
Query: 70 QMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLNES 129
Q D C S+F +K+Y+ L+++ +S+ ++N +L+ +
Sbjct: 124 QETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSK 183
Query: 130 QLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYPNRLSY 189
+ + + + +V + N+L++ C G ++AL +F +M+ + C PN ++Y
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 190 LILMKGLCQDGKLHEAIHLLYSM-------------------------------FWRISR 249
L+ G C+ K+ + LL SM ++R
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 250 RGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTV 309
RG D V Y TL+ C G QA+ + ++L+ GL + + + C+ +
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM-- 363
Query: 310 TEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAK 369
+++ ++G P+ +Y + + ++ +V+ M GF P Y A
Sbjct: 364 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 423
Query: 370 AAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQV 429
C GK++DA+ V+E+ KG P V Y+ VL+G CR A+ ++MV++
Sbjct: 424 INGHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK- 483
Query: 430 GLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKA 485
G+ D TYS+L+ G C + R EAC L EEM+ P T+ LI C G KA
Sbjct: 484 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 543
BLAST of Carg04985 vs. ExPASy TrEMBL
Match:
A0A6J1H9J7 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita moschata OX=3662 GN=LOC111460851 PE=4 SV=1)
HSP 1 Score: 1010.0 bits (2610), Expect = 3.8e-291
Identity = 496/498 (99.60%), Postives = 497/498 (99.80%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACKLLEEMVIKSHWPCSNTFNTL RGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLTRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVV 499
VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498
BLAST of Carg04985 vs. ExPASy TrEMBL
Match:
A0A6J1KU44 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=3661 GN=LOC111497651 PE=4 SV=1)
HSP 1 Score: 1000.3 bits (2585), Expect = 3.0e-288
Identity = 492/501 (98.20%), Postives = 495/501 (98.80%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKILKKGLK+PKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSCVPTVALYNIVLNGLCR GKSTVAMEFLKKM KQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
Query: 481 VSSLCFNVADTDMWSKVVMII 502
VSSLCFNVA T MWSKV+ I
Sbjct: 481 VSSLCFNVAGTFMWSKVLQQI 501
BLAST of Carg04985 vs. ExPASy TrEMBL
Match:
A0A1S4E2N8 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)
HSP 1 Score: 882.9 bits (2280), Expect = 7.0e-253
Identity = 431/498 (86.55%), Postives = 470/498 (94.38%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPR+LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
+SEMREV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCT+RTQTFNT
Sbjct: 61 VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQL AACQLFQ+ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLI+MKGLCQDG+L+EAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKIL+KGLKAPKRAHY IDL+ CR +KLT+ EIK LINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMA+DLYNEN+TDQGDKVVSHM+AKGF PPSS+YEAK A+LCKEGKVDDAVKVIEE+ V
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
GSCVPT+ALYNIVL GLC GKSTVAME+LKKM K+VGLVA+KETYSTLVHGLCRENRY
Sbjct: 361 -GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACK+LEEMVIKS WPCSNTFNTLI+GLCSVGK Y+AVM LEEMISQGQLP + VWN+L
Sbjct: 421 TEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSL 480
Query: 481 VSSLCFNVADTDMWSKVV 499
VSSLC +VA DM SKV+
Sbjct: 481 VSSLCCDVAGIDMCSKVL 497
BLAST of Carg04985 vs. ExPASy TrEMBL
Match:
A0A5D3DM62 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002440 PE=4 SV=1)
HSP 1 Score: 882.9 bits (2280), Expect = 7.0e-253
Identity = 431/498 (86.55%), Postives = 470/498 (94.38%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPR+LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMINILGNSGR
Sbjct: 1 MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
+SEMREV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCT+RTQTFNT
Sbjct: 61 VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNESQL AACQLFQ+ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
SCYPNRLSYLI+MKGLCQDG+L+EAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
IEQAVEILGKIL+KGLKAPKRAHY IDL+ CR +KLT+ EIK LINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMA+DLYNEN+TDQGDKVVSHM+AKGF PPSS+YEAK A+LCKEGKVDDAVKVIEE+ V
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
GSCVPT+ALYNIVL GLC GKSTVAME+LKKM K+VGLVA+KETYSTLVHGLCRENRY
Sbjct: 361 -GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
TEACK+LEEMVIKS WPCSNTFNTLI+GLCSVGK Y+AVM LEEMISQGQLP + VWN+L
Sbjct: 421 TEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSL 480
Query: 481 VSSLCFNVADTDMWSKVV 499
VSSLC +VA DM SKV+
Sbjct: 481 VSSLCCDVAGIDMCSKVL 497
BLAST of Carg04985 vs. ExPASy TrEMBL
Match:
A0A6J1DVG7 (pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=3673 GN=LOC111024421 PE=4 SV=1)
HSP 1 Score: 870.9 bits (2249), Expect = 2.8e-249
Identity = 422/499 (84.57%), Postives = 464/499 (92.99%), Query Frame = 0
Query: 1 MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
MTVRWPR+LTPTHLSQIIRKQNNPFTA+QLF EAKCRYP Y+HNGPVYAAMI+ILGNSGR
Sbjct: 1 MTVRWPRMLTPTHLSQIIRKQNNPFTAFQLFKEAKCRYPGYRHNGPVYAAMIDILGNSGR 60
Query: 61 ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
+ EMREVIDQMK DSC+CKDS+FSFAIKTYASHGLLEEGISLFKSLG FNCT+RTQTFNT
Sbjct: 61 VVEMREVIDQMKDDSCECKDSVFSFAIKTYASHGLLEEGISLFKSLGRFNCTNRTQTFNT 120
Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
LLEILLNES+LDAACQLFQQSS+GW VKSRTQSLNLLMQSLCQR QSELALH+F+EMDYQ
Sbjct: 121 LLEILLNESRLDAACQLFQQSSYGWGVKSRTQSLNLLMQSLCQRAQSELALHIFQEMDYQ 180
Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
CYPNRLSYLILMKGLCQDG+L+EA+HLLYSMFWRIS+RGSGGDIVIYRTLL+ALC NGE
Sbjct: 181 GCYPNRLSYLILMKGLCQDGRLNEAVHLLYSMFWRISQRGSGGDIVIYRTLLYALCANGE 240
Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
+EQAVEILGKIL+KGLKAPKR HY IDL+ C+ SKLT+ EIK L NEALIKGGIPS +Y
Sbjct: 241 VEQAVEILGKILRKGLKAPKRVHYRIDLDQCKNSKLTIDEIKRLFNEALIKGGIPSLATY 300
Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
CAMA+DLYNEN TDQGDKVVSHMLAKGF PPSS+YEAKAAALCKEGKVDDA++VI+EETV
Sbjct: 301 CAMAVDLYNENVTDQGDKVVSHMLAKGFRPPSSIYEAKAAALCKEGKVDDAMRVIDEETV 360
Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
KGSC+P+VALYNIVL GL GKSTVA+E+LKKM KQVGLVADKETYS LVHGLC ENRY
Sbjct: 361 KGSCIPSVALYNIVLKGLSNEGKSTVALEYLKKMAKQVGLVADKETYSILVHGLCAENRY 420
Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
EACK+LEEMVIKS+ PCS+TFNTLI GLCS+GK Y+AVM LEEMISQGQLPELSVWN+L
Sbjct: 421 IEACKMLEEMVIKSYRPCSDTFNTLIGGLCSIGKQYEAVMWLEEMISQGQLPELSVWNSL 480
Query: 481 VSSLCFNVADTDMWSKVVM 500
VSS+CFNVA TD+W+ V+
Sbjct: 481 VSSVCFNVAGTDVWTSEVL 499
BLAST of Carg04985 vs. TAIR 10
Match:
AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-159
Identity = 270/488 (55.33%), Postives = 366/488 (75.00%), Query Frame = 0
Query: 3 VRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRIS 62
VRWPR+LTP+ LSQI++KQ NP TA +LF EAK R+P+Y HNG VYA MI+ILG S R+
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63
Query: 63 EMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLL 122
EM+ VI++MK DSC+CKDS+F+ I+T++ G LE+ ISLFKSL FNC + + +F+TLL
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 123 EILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC 182
+ ++ ES+L+AAC +F++ +GWEV SR +LNLLM+ LCQ +S+LA VF+EM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 183 YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIE 242
YP+R SY ILMKG C +GKL EA HLLYSMFWRIS++GSG DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 243 QAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCA 302
A+EILGKIL+KGLKAPKR ++ I+ + S + +K L+ E LI+G IP DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 303 MAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKG 362
MA DL+ E + +G++V+ M +KGF P +Y AK ALC+ GK+ +AV VI +E ++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 363 SCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTE 422
C+PTV +YN+++ GLC GKS A+ +LKKM KQV VA++ETY TLV GLCR+ ++ E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 423 ACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVS 482
A +++EEM+IKSH+P T++ +I+GLC + + Y+AVM LEEM+SQ +PE SVW AL
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 483 SLCFNVAD 491
S+CF D
Sbjct: 484 SVCFCAID 491
BLAST of Carg04985 vs. TAIR 10
Match:
AT1G05600.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-159
Identity = 270/488 (55.33%), Postives = 366/488 (75.00%), Query Frame = 0
Query: 3 VRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRIS 62
VRWPR+LTP+ LSQI++KQ NP TA +LF EAK R+P+Y HNG VYA MI+ILG S R+
Sbjct: 4 VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63
Query: 63 EMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLL 122
EM+ VI++MK DSC+CKDS+F+ I+T++ G LE+ ISLFKSL FNC + + +F+TLL
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 123 EILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC 182
+ ++ ES+L+AAC +F++ +GWEV SR +LNLLM+ LCQ +S+LA VF+EM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 183 YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIE 242
YP+R SY ILMKG C +GKL EA HLLYSMFWRIS++GSG DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 243 QAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCA 302
A+EILGKIL+KGLKAPKR ++ I+ + S + +K L+ E LI+G IP DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303
Query: 303 MAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKG 362
MA DL+ E + +G++V+ M +KGF P +Y AK ALC+ GK+ +AV VI +E ++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363
Query: 363 SCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTE 422
C+PTV +YN+++ GLC GKS A+ +LKKM KQV VA++ETY TLV GLCR+ ++ E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423
Query: 423 ACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVS 482
A +++EEM+IKSH+P T++ +I+GLC + + Y+AVM LEEM+SQ +PE SVW AL
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Query: 483 SLCFNVAD 491
S+CF D
Sbjct: 484 SVCFCAID 491
BLAST of Carg04985 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 183.3 bits (464), Expect = 5.1e-46
Identity = 122/548 (22.26%), Postives = 243/548 (44.34%), Query Frame = 0
Query: 9 LTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVI 68
L P H++ +I+ Q +P A ++FN + + ++H Y ++I LG G+ M EV+
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64
Query: 69 DQMKVD-SCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLN 128
M+ + + ++ A+K Y G ++E +++F+ + ++C ++N ++ +L++
Sbjct: 65 VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124
Query: 129 ESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC----- 188
D A +++ + + S + M+S C+ + AL + M Q C
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184
Query: 189 ------------------------------------------------------------ 248
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 244
Query: 249 -----YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCD 308
PN +Y + ++GLCQ G+L A+ ++ + +G D++ Y L++ LC
Sbjct: 245 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI----EQGPKPDVITYNNLIYGLCK 304
Query: 309 NGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSS 368
N + ++A LGK++ +GL+ + + YC+ + + E ++ +A+ G +P
Sbjct: 305 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE--RIVGDAVFNGFVPDQ 364
Query: 369 DSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEE 428
+Y ++ L +E ET++ + + L KG P +Y L +G + +A ++ E
Sbjct: 365 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 424
Query: 429 ETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRE 486
+ KG +P V +NI++NGLC++G + A +K M+ + G D T++ L+HG +
Sbjct: 425 MSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQ 484
BLAST of Carg04985 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 182.6 bits (462), Expect = 8.7e-46
Identity = 130/541 (24.03%), Postives = 250/541 (46.21%), Query Frame = 0
Query: 10 TPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVID 69
T L +R Q + A +LFN A + PN+ +Y ++ LG SG +M+++++
Sbjct: 49 TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108
Query: 70 QMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFK-SLGGFNCTDRTQTFNTLLEILLNE 129
MK C+ S F I++YA L +E +S+ + F T +N +L +L++
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168
Query: 130 SQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLC-------------------------- 189
+ L ++ W +K + N+L+++LC
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228
Query: 190 ---------QRGQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMF 249
+ G + AL + ++M C + +S +++ G C++G++ +A++ + M
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288
Query: 250 WRISRRGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRI 309
++ G D + TL+ LC G ++ A+EI+ +L++G + + C++
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348
Query: 310 SKLTVTEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSS 369
+ V E ++++ + + P++ +Y + L EN+ ++ ++ + +KG P
Sbjct: 349 GE--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 408
Query: 370 VYEAKAAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKK 429
+ + LC A+++ EE KG C P YN++++ LC GK A+ LK+
Sbjct: 409 TFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 468
Query: 430 MVKQVGLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVG 489
M + G TY+TL+ G C+ N+ EA ++ +EM + S T+NTLI GLC
Sbjct: 469 M-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 528
Query: 490 KPYKAVMCLEEMISQGQLPELSVWNALVSSLCFNVADTDMWSKVVMIILGYAREPLIDTL 515
+ A +++MI +GQ P+ +N+L++ C D + +V + EP I T
Sbjct: 529 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKAADIVQAMTSNGCEPDIVTY 579
BLAST of Carg04985 vs. TAIR 10
Match:
AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 174.1 bits (440), Expect = 3.1e-43
Identity = 109/444 (24.55%), Postives = 216/444 (48.65%), Query Frame = 0
Query: 49 AAMINILGNSGRISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLF-KSLG 108
++MI NSG + +++ ++++++ + F + Y L ++ + LF + +
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 109 GFNCTDRTQTFNTLLEILLNESQLDAACQLFQ---QSSFGWEVKSRTQSLNLLMQSLCQR 168
F C ++FN++L +++NE + + S+ + S NL++++LC+
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 169 GQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGD 228
+ A+ VF+ M + C P+ +Y LM GLC++ ++ EA+ LL M G
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPS 260
Query: 229 IVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCL 288
VIY L+ LC G++ + +++ + KG + + + C KL + L
Sbjct: 261 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSL 320
Query: 289 INEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCK 348
+ + IP+ +Y + L + +++S M +G+ +Y + L K
Sbjct: 321 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 380
Query: 349 EGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADK 408
EGK ++A+ + + KG C P + +Y+++++GLCR GK A E L +M+ G + +
Sbjct: 381 EGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNA 440
Query: 409 ETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNT---FNTLIRGLCSVGKPYKAVMC 468
TYS+L+ G + EA ++ +EM CS ++ LI GLC VG+ +A+M
Sbjct: 441 YTYSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 500
Query: 469 LEEMISQGQLPELSVWNALVSSLC 486
+M++ G P+ +++++ LC
Sbjct: 501 WSKMLTIGIKPDTVAYSSIIKGLC 513
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7025356.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6592948.1 | 2.1e-291 | 99.80 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022959953.1 | 7.8e-291 | 99.60 | pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata] >XP_0... | [more] |
XP_023514107.1 | 2.5e-289 | 99.00 | pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucurbita pepo... | [more] |
XP_023004266.1 | 6.2e-288 | 98.20 | pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023... | [more] |
Match Name | E-value | Identity | Description | |
Q9SYK1 | 1.7e-158 | 55.33 | Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX... | [more] |
Q9CA58 | 7.2e-45 | 22.26 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Q9LFF1 | 1.2e-44 | 24.03 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
O49436 | 4.3e-42 | 24.55 | Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 1.7e-38 | 24.44 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1H9J7 | 3.8e-291 | 99.60 | pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1KU44 | 3.0e-288 | 98.20 | pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=366... | [more] |
A0A1S4E2N8 | 7.0e-253 | 86.55 | pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo... | [more] |
A0A5D3DM62 | 7.0e-253 | 86.55 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1DVG7 | 2.8e-249 | 84.57 | pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=... | [more] |
Match Name | E-value | Identity | Description | |
AT1G05600.1 | 1.2e-159 | 55.33 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G05600.2 | 1.2e-159 | 55.33 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74580.1 | 5.1e-46 | 22.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 8.7e-46 | 24.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G20090.1 | 3.1e-43 | 24.55 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |