Carg04985 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04985
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr08: 854350 .. 856326 (+)
RNA-Seq ExpressionCarg04985
SyntenyCarg04985
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGTTAGGTGGCCAAGGCTTTTAACGCCCACACACCTGTCTCAGATTATTAGGAAGCAGAACAATCCTTTCACAGCTTACCAACTGTTCAATGAAGCCAAATGTAGGTATCCAAATTATCAGCACAATGGTCCGGTGTACGCCGCAATGATCAATATACTTGGAAACTCGGGTAGAATTTCCGAGATGAGGGAAGTGATAGATCAGATGAAAGTTGACTCTTGTCAGTGCAAGGATTCTATATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGAAGGTATATCTCTGTTTAAAAGCCTTGGGGGATTTAACTGTACCGATAGAACACAAACTTTCAATACCCTTTTGGAAATACTCTTGAATGAATCTCAGCTCGATGCTGCTTGTCAGCTTTTTCAGCAGAGTTCATTTGGTTGGGAAGTGAAATCCAGGACTCAGTCATTGAATTTGCTAATGCAATCTCTTTGTCAAAGAGGCCAATCTGAACTTGCTTTACATGTCTTTAAAGAAATGGATTACCAAAGTTGCTATCCTAATAGGCTGAGTTATTTGATTCTAATGAAAGGACTGTGTCAAGATGGTAAGCTTCATGAGGCCATCCATTTATTGTATTCCATGTTCTGGAGGATTTCTCGAAGGGGTAGCGGAGGGGACATAGTAATTTACAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATTGAGCAAGCTGTGGAAATACTAGGCAAGATCTTGAAGAAAGGACTGAAAGCCCCTAAGCGAGCTCATTACTTGATTGACCTCAACTACTGCAGGATTAGCAAGCTCACCGTCACGGAAATCAAGTGTTTAATCAATGAAGCTTTAATCAAAGGTGGAATTCCCAGTTCAGATAGTTACTGTGCCATGGCTATCGATCTATATAACGAAAACGAGACTGATCAGGGAGATAAAGTTGTTAGCCACATGCTAGCTAAAGGCTTTTGGCCACCATCCTCAGTCTATGAGGCGAAAGCAGCTGCATTATGCAAAGAAGGGAAAGTTGATGATGCAGTGAAAGTAATTGAAGAGGAAACGGTGAAGGGAAGTTGCGTTCCAACCGTTGCGTTGTATAACATCGTTCTGAACGGTCTTTGTAGGGTGGGCAAGTCAACAGTGGCTATGGAGTTCTTGAAGAAAATGGTAAAGCAGGTTGGTCTTGTTGCAGACAAGGAGACTTATAGCACTTTAGTACATGGTCTTTGTCGTGAGAATAGATACACTGAAGCATGTAAGTTGTTGGAGGAGATGGTTATCAAATCACATTGGCCTTGTTCTAACACATTCAATACACTTATCAGAGGTCTTTGCTCGGTTGGAAAACCATATAAAGCAGTGATGTGCTTGGAAGAAATGATTAGCCAAGGCCAATTGCCTGAACTTTCTGTCTGGAATGCTTTGGTTTCATCTTTGTGTTTCAATGTGGCTGACACTGATATGTGGTCTAAGGTCTTACGACAGATACGAAGTTGTTGATGTTCTGTGCCAGAGTATGTACAGTAAGATATAAATCTCATTTTGGTACCAGATTTTTACATTGATTCAATACTTTCAAGTATTCCTAAACTTTAAAAATAATCATTTCGATCTGGATTGTTAATAATTTAGGTCTGCGGTGTTTTCGTTAGACGGTGTTTGTTAGTAGTGTCATCCTCCCCATTGGCTATATGGGTAGGTTGCCCCTCGCTGCTGCGTTTTGTTAGGCTATGGATTATAGGAACAAATGTAGTTGAGTTAGATAGCAGGCGGGTTACTTGTTTCATTGTACCGAGATGTGAGGTGCAGGTGGTGATGATCATCTTGGGGTATGCGCGGGAGCCCTTGATAGACACTCTAGGACCTGTCAATGCTCGTGAAAGTCCGAGTCAATCCTCCATTCATTCAACCAAAGGTGTGGATAACGAGGCCACCTTTACAGGTATGCGCAGGAGCCCTTGA

mRNA sequence

ATGACTGTTAGGTGGCCAAGGCTTTTAACGCCCACACACCTGTCTCAGATTATTAGGAAGCAGAACAATCCTTTCACAGCTTACCAACTGTTCAATGAAGCCAAATGTAGGTATCCAAATTATCAGCACAATGGTCCGGTGTACGCCGCAATGATCAATATACTTGGAAACTCGGGTAGAATTTCCGAGATGAGGGAAGTGATAGATCAGATGAAAGTTGACTCTTGTCAGTGCAAGGATTCTATATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGAAGGTATATCTCTGTTTAAAAGCCTTGGGGGATTTAACTGTACCGATAGAACACAAACTTTCAATACCCTTTTGGAAATACTCTTGAATGAATCTCAGCTCGATGCTGCTTGTCAGCTTTTTCAGCAGAGTTCATTTGGTTGGGAAGTGAAATCCAGGACTCAGTCATTGAATTTGCTAATGCAATCTCTTTGTCAAAGAGGCCAATCTGAACTTGCTTTACATGTCTTTAAAGAAATGGATTACCAAAGTTGCTATCCTAATAGGCTGAGTTATTTGATTCTAATGAAAGGACTGTGTCAAGATGGTAAGCTTCATGAGGCCATCCATTTATTGTATTCCATGTTCTGGAGGATTTCTCGAAGGGGTAGCGGAGGGGACATAGTAATTTACAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATTGAGCAAGCTGTGGAAATACTAGGCAAGATCTTGAAGAAAGGACTGAAAGCCCCTAAGCGAGCTCATTACTTGATTGACCTCAACTACTGCAGGATTAGCAAGCTCACCGTCACGGAAATCAAGTGTTTAATCAATGAAGCTTTAATCAAAGGTGGAATTCCCAGTTCAGATAGTTACTGTGCCATGGCTATCGATCTATATAACGAAAACGAGACTGATCAGGGAGATAAAGTTGTTAGCCACATGCTAGCTAAAGGCTTTTGGCCACCATCCTCAGTCTATGAGGCGAAAGCAGCTGCATTATGCAAAGAAGGGAAAGTTGATGATGCAGTGAAAGTAATTGAAGAGGAAACGGTGAAGGGAAGTTGCGTTCCAACCGTTGCGTTGTATAACATCGTTCTGAACGGTCTTTGTAGGGTGGGCAAGTCAACAGTGGCTATGGAGTTCTTGAAGAAAATGGTAAAGCAGGTTGGTCTTGTTGCAGACAAGGAGACTTATAGCACTTTAGTACATGGTCTTTGTCGTGAGAATAGATACACTGAAGCATGTAAGTTGTTGGAGGAGATGGTTATCAAATCACATTGGCCTTGTTCTAACACATTCAATACACTTATCAGAGGTCTTTGCTCGGTTGGAAAACCATATAAAGCAGTGATGTGCTTGGAAGAAATGATTAGCCAAGGCCAATTGCCTGAACTTTCTGTCTGGAATGCTTTGGTTTCATCTTTGTGTTTCAATGTGGCTGACACTGATATGTGGTCTAAGGTGGTGATGATCATCTTGGGGTATGCGCGGGAGCCCTTGATAGACACTCTAGGACCTGTCAATGCTCGTGAAAGTCCGAGTCAATCCTCCATTCATTCAACCAAAGGTGTGGATAACGAGGCCACCTTTACAGGTATGCGCAGGAGCCCTTGA

Coding sequence (CDS)

ATGACTGTTAGGTGGCCAAGGCTTTTAACGCCCACACACCTGTCTCAGATTATTAGGAAGCAGAACAATCCTTTCACAGCTTACCAACTGTTCAATGAAGCCAAATGTAGGTATCCAAATTATCAGCACAATGGTCCGGTGTACGCCGCAATGATCAATATACTTGGAAACTCGGGTAGAATTTCCGAGATGAGGGAAGTGATAGATCAGATGAAAGTTGACTCTTGTCAGTGCAAGGATTCTATATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGAAGGTATATCTCTGTTTAAAAGCCTTGGGGGATTTAACTGTACCGATAGAACACAAACTTTCAATACCCTTTTGGAAATACTCTTGAATGAATCTCAGCTCGATGCTGCTTGTCAGCTTTTTCAGCAGAGTTCATTTGGTTGGGAAGTGAAATCCAGGACTCAGTCATTGAATTTGCTAATGCAATCTCTTTGTCAAAGAGGCCAATCTGAACTTGCTTTACATGTCTTTAAAGAAATGGATTACCAAAGTTGCTATCCTAATAGGCTGAGTTATTTGATTCTAATGAAAGGACTGTGTCAAGATGGTAAGCTTCATGAGGCCATCCATTTATTGTATTCCATGTTCTGGAGGATTTCTCGAAGGGGTAGCGGAGGGGACATAGTAATTTACAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATTGAGCAAGCTGTGGAAATACTAGGCAAGATCTTGAAGAAAGGACTGAAAGCCCCTAAGCGAGCTCATTACTTGATTGACCTCAACTACTGCAGGATTAGCAAGCTCACCGTCACGGAAATCAAGTGTTTAATCAATGAAGCTTTAATCAAAGGTGGAATTCCCAGTTCAGATAGTTACTGTGCCATGGCTATCGATCTATATAACGAAAACGAGACTGATCAGGGAGATAAAGTTGTTAGCCACATGCTAGCTAAAGGCTTTTGGCCACCATCCTCAGTCTATGAGGCGAAAGCAGCTGCATTATGCAAAGAAGGGAAAGTTGATGATGCAGTGAAAGTAATTGAAGAGGAAACGGTGAAGGGAAGTTGCGTTCCAACCGTTGCGTTGTATAACATCGTTCTGAACGGTCTTTGTAGGGTGGGCAAGTCAACAGTGGCTATGGAGTTCTTGAAGAAAATGGTAAAGCAGGTTGGTCTTGTTGCAGACAAGGAGACTTATAGCACTTTAGTACATGGTCTTTGTCGTGAGAATAGATACACTGAAGCATGTAAGTTGTTGGAGGAGATGGTTATCAAATCACATTGGCCTTGTTCTAACACATTCAATACACTTATCAGAGGTCTTTGCTCGGTTGGAAAACCATATAAAGCAGTGATGTGCTTGGAAGAAATGATTAGCCAAGGCCAATTGCCTGAACTTTCTGTCTGGAATGCTTTGGTTTCATCTTTGTGTTTCAATGTGGCTGACACTGATATGTGGTCTAAGGTGGTGATGATCATCTTGGGGTATGCGCGGGAGCCCTTGATAGACACTCTAGGACCTGTCAATGCTCGTGAAAGTCCGAGTCAATCCTCCATTCATTCAACCAAAGGTGTGGATAACGAGGCCACCTTTACAGGTATGCGCAGGAGCCCTTGA

Protein sequence

MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFTGMRRSP
Homology
BLAST of Carg04985 vs. NCBI nr
Match: KAG7025356.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1106.3 bits (2860), Expect = 0.0e+00
Identity = 546/546 (100.00%), Postives = 546/546 (100.00%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFT 540
           VSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFT
Sbjct: 481 VSSLCFNVADTDMWSKVVMIILGYAREPLIDTLGPVNARESPSQSSIHSTKGVDNEATFT 540

Query: 541 GMRRSP 547
           GMRRSP
Sbjct: 541 GMRRSP 546

BLAST of Carg04985 vs. NCBI nr
Match: KAG6592948.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.1e-291
Identity = 497/498 (99.80%), Postives = 498/498 (100.00%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVV 499
           VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498

BLAST of Carg04985 vs. NCBI nr
Match: XP_022959953.1 (pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata] >XP_022959954.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata] >XP_022959955.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata])

HSP 1 Score: 1010.0 bits (2610), Expect = 7.8e-291
Identity = 496/498 (99.60%), Postives = 497/498 (99.80%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACKLLEEMVIKSHWPCSNTFNTL RGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLTRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVV 499
           VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498

BLAST of Carg04985 vs. NCBI nr
Match: XP_023514107.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1005.0 bits (2597), Expect = 2.5e-289
Identity = 493/498 (99.00%), Postives = 495/498 (99.40%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLK+PKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCR G STVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRAGNSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
            EACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 IEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVV 499
           VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498

BLAST of Carg04985 vs. NCBI nr
Match: XP_023004266.1 (pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004267.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004268.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004269.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023004270.1 pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima])

HSP 1 Score: 1000.3 bits (2585), Expect = 6.2e-288
Identity = 492/501 (98.20%), Postives = 495/501 (98.80%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLK+PKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCR GKSTVAMEFLKKM KQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVVMII 502
           VSSLCFNVA T MWSKV+  I
Sbjct: 481 VSSLCFNVAGTFMWSKVLQQI 501

BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match: Q9SYK1 (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.7e-158
Identity = 270/488 (55.33%), Postives = 366/488 (75.00%), Query Frame = 0

Query: 3   VRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRIS 62
           VRWPR+LTP+ LSQI++KQ NP TA +LF EAK R+P+Y HNG VYA MI+ILG S R+ 
Sbjct: 4   VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63

Query: 63  EMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLL 122
           EM+ VI++MK DSC+CKDS+F+  I+T++  G LE+ ISLFKSL  FNC + + +F+TLL
Sbjct: 64  EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123

Query: 123 EILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC 182
           + ++ ES+L+AAC +F++  +GWEV SR  +LNLLM+ LCQ  +S+LA  VF+EM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183

Query: 183 YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIE 242
           YP+R SY ILMKG C +GKL EA HLLYSMFWRIS++GSG DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243

Query: 243 QAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCA 302
            A+EILGKIL+KGLKAPKR ++ I+  +   S   +  +K L+ E LI+G IP  DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 303 MAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKG 362
           MA DL+ E +  +G++V+  M +KGF P   +Y AK  ALC+ GK+ +AV VI +E ++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 363 SCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTE 422
            C+PTV +YN+++ GLC  GKS  A+ +LKKM KQV  VA++ETY TLV GLCR+ ++ E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 423 ACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVS 482
           A +++EEM+IKSH+P   T++ +I+GLC + + Y+AVM LEEM+SQ  +PE SVW AL  
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483

Query: 483 SLCFNVAD 491
           S+CF   D
Sbjct: 484 SVCFCAID 491

BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.2e-45
Identity = 122/548 (22.26%), Postives = 243/548 (44.34%), Query Frame = 0

Query: 9   LTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVI 68
           L P H++ +I+ Q +P  A ++FN  + +   ++H    Y ++I  LG  G+   M EV+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 69  DQMKVD-SCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLN 128
             M+ +      + ++  A+K Y   G ++E +++F+ +  ++C     ++N ++ +L++
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 129 ESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC----- 188
               D A +++ +      +     S  + M+S C+  +   AL +   M  Q C     
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 189 ------------------------------------------------------------ 248
                                                                       
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 244

Query: 249 -----YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCD 308
                 PN  +Y + ++GLCQ G+L  A+ ++  +      +G   D++ Y  L++ LC 
Sbjct: 245 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI----EQGPKPDVITYNNLIYGLCK 304

Query: 309 NGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSS 368
           N + ++A   LGK++ +GL+     +  +   YC+   + + E   ++ +A+  G +P  
Sbjct: 305 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE--RIVGDAVFNGFVPDQ 364

Query: 369 DSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEE 428
            +Y ++   L +E ET++   + +  L KG  P   +Y      L  +G + +A ++  E
Sbjct: 365 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 424

Query: 429 ETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRE 486
            + KG  +P V  +NI++NGLC++G  + A   +K M+ + G   D  T++ L+HG   +
Sbjct: 425 MSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQ 484

BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.2e-44
Identity = 130/541 (24.03%), Postives = 250/541 (46.21%), Query Frame = 0

Query: 10  TPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVID 69
           T   L   +R Q +   A +LFN A  + PN+     +Y  ++  LG SG   +M+++++
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108

Query: 70  QMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFK-SLGGFNCTDRTQTFNTLLEILLNE 129
            MK   C+   S F   I++YA   L +E +S+    +  F     T  +N +L +L++ 
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168

Query: 130 SQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLC-------------------------- 189
           + L    ++       W +K    + N+L+++LC                          
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228

Query: 190 ---------QRGQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMF 249
                    + G  + AL + ++M    C  + +S  +++ G C++G++ +A++ +  M 
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288

Query: 250 WRISRRGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRI 309
              ++ G   D   + TL+  LC  G ++ A+EI+  +L++G       +  +    C++
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348

Query: 310 SKLTVTEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSS 369
            +  V E   ++++ + +   P++ +Y  +   L  EN+ ++  ++   + +KG  P   
Sbjct: 349 GE--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 408

Query: 370 VYEAKAAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKK 429
            + +    LC       A+++ EE   KG C P    YN++++ LC  GK   A+  LK+
Sbjct: 409 TFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 468

Query: 430 MVKQVGLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVG 489
           M +  G      TY+TL+ G C+ N+  EA ++ +EM +      S T+NTLI GLC   
Sbjct: 469 M-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 528

Query: 490 KPYKAVMCLEEMISQGQLPELSVWNALVSSLCFNVADTDMWSKVVMIILGYAREPLIDTL 515
           +   A   +++MI +GQ P+   +N+L++  C    D    + +V  +     EP I T 
Sbjct: 529 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKAADIVQAMTSNGCEPDIVTY 579

BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.3e-42
Identity = 109/444 (24.55%), Postives = 216/444 (48.65%), Query Frame = 0

Query: 49  AAMINILGNSGRISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLF-KSLG 108
           ++MI    NSG    + +++ ++++++    +  F    + Y    L ++ + LF + + 
Sbjct: 81  SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140

Query: 109 GFNCTDRTQTFNTLLEILLNESQLDAACQLFQ---QSSFGWEVKSRTQSLNLLMQSLCQR 168
            F C    ++FN++L +++NE       + +     S+    +     S NL++++LC+ 
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200

Query: 169 GQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGD 228
              + A+ VF+ M  + C P+  +Y  LM GLC++ ++ EA+ LL  M       G    
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPS 260

Query: 229 IVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCL 288
            VIY  L+  LC  G++ +  +++  +  KG    +  +  +    C   KL   +   L
Sbjct: 261 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSL 320

Query: 289 INEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCK 348
           +   +    IP+  +Y  +   L  +       +++S M  +G+     +Y    + L K
Sbjct: 321 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 380

Query: 349 EGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADK 408
           EGK ++A+ +  +   KG C P + +Y+++++GLCR GK   A E L +M+   G + + 
Sbjct: 381 EGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNA 440

Query: 409 ETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNT---FNTLIRGLCSVGKPYKAVMC 468
            TYS+L+ G  +     EA ++ +EM       CS     ++ LI GLC VG+  +A+M 
Sbjct: 441 YTYSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 500

Query: 469 LEEMISQGQLPELSVWNALVSSLC 486
             +M++ G  P+   +++++  LC
Sbjct: 501 WSKMLTIGIKPDTVAYSSIIKGLC 513

BLAST of Carg04985 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-38
Identity = 109/446 (24.44%), Postives = 197/446 (44.17%), Query Frame = 0

Query: 70  QMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLNES 129
           Q   D C    S+F   +K+Y+   L+++ +S+              ++N +L+  +   
Sbjct: 124 QETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSK 183

Query: 130 QLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSCYPNRLSY 189
           +  +  +   +     +V     + N+L++  C  G  ++AL +F +M+ + C PN ++Y
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243

Query: 190 LILMKGLCQDGKLHEAIHLLYSM-------------------------------FWRISR 249
             L+ G C+  K+ +   LL SM                                  ++R
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303

Query: 250 RGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTV 309
           RG   D V Y TL+   C  G   QA+ +  ++L+ GL      +  +  + C+   +  
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNM-- 363

Query: 310 TEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAK 369
                 +++  ++G  P+  +Y  +      +   ++  +V+  M   GF P    Y A 
Sbjct: 364 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 423

Query: 370 AAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQV 429
               C  GK++DA+ V+E+   KG   P V  Y+ VL+G CR      A+   ++MV++ 
Sbjct: 424 INGHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK- 483

Query: 430 GLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKA 485
           G+  D  TYS+L+ G C + R  EAC L EEM+     P   T+  LI   C  G   KA
Sbjct: 484 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 543

BLAST of Carg04985 vs. ExPASy TrEMBL
Match: A0A6J1H9J7 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita moschata OX=3662 GN=LOC111460851 PE=4 SV=1)

HSP 1 Score: 1010.0 bits (2610), Expect = 3.8e-291
Identity = 496/498 (99.60%), Postives = 497/498 (99.80%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACKLLEEMVIKSHWPCSNTFNTL RGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLTRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVV 499
           VSSLCFNVADTDMWSKV+
Sbjct: 481 VSSLCFNVADTDMWSKVL 498

BLAST of Carg04985 vs. ExPASy TrEMBL
Match: A0A6J1KU44 (pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=3661 GN=LOC111497651 PE=4 SV=1)

HSP 1 Score: 1000.3 bits (2585), Expect = 3.0e-288
Identity = 492/501 (98.20%), Postives = 495/501 (98.80%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT
Sbjct: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKILKKGLK+PKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILKKGLKSPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV
Sbjct: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSCVPTVALYNIVLNGLCR GKSTVAMEFLKKM KQVGLVADKETYSTLVHGLCRENRY
Sbjct: 361 KGSCVPTVALYNIVLNGLCRAGKSTVAMEFLKKMAKQVGLVADKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL
Sbjct: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480

Query: 481 VSSLCFNVADTDMWSKVVMII 502
           VSSLCFNVA T MWSKV+  I
Sbjct: 481 VSSLCFNVAGTFMWSKVLQQI 501

BLAST of Carg04985 vs. ExPASy TrEMBL
Match: A0A1S4E2N8 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 7.0e-253
Identity = 431/498 (86.55%), Postives = 470/498 (94.38%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPR+LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           +SEMREV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCT+RTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQL AACQLFQ+ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLI+MKGLCQDG+L+EAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKIL+KGLKAPKRAHY IDL+ CR +KLT+ EIK LINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMA+DLYNEN+TDQGDKVVSHM+AKGF PPSS+YEAK A+LCKEGKVDDAVKVIEE+ V
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
            GSCVPT+ALYNIVL GLC  GKSTVAME+LKKM K+VGLVA+KETYSTLVHGLCRENRY
Sbjct: 361 -GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACK+LEEMVIKS WPCSNTFNTLI+GLCSVGK Y+AVM LEEMISQGQLP + VWN+L
Sbjct: 421 TEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSL 480

Query: 481 VSSLCFNVADTDMWSKVV 499
           VSSLC +VA  DM SKV+
Sbjct: 481 VSSLCCDVAGIDMCSKVL 497

BLAST of Carg04985 vs. ExPASy TrEMBL
Match: A0A5D3DM62 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002440 PE=4 SV=1)

HSP 1 Score: 882.9 bits (2280), Expect = 7.0e-253
Identity = 431/498 (86.55%), Postives = 470/498 (94.38%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPR+LTPT+LSQIIRKQNNP TAYQLF EAKCRYP+Y+HNGPVYAAMINILGNSGR
Sbjct: 1   MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           +SEMREV+DQM+ DSC+CKDS+FSFAIKTYASHGLLE+GISLFKSLG FNCT+RTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNESQL AACQLFQ+ S+GWEVKSRTQSLNLLMQSLCQRGQSELALHVF+EMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLI+MKGLCQDG+L+EAIHLLYSMFWRISR+GSGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           IEQAVEILGKIL+KGLKAPKRAHY IDL+ CR +KLT+ EIK LINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMA+DLYNEN+TDQGDKVVSHM+AKGF PPSS+YEAK A+LCKEGKVDDAVKVIEE+ V
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
            GSCVPT+ALYNIVL GLC  GKSTVAME+LKKM K+VGLVA+KETYSTLVHGLCRENRY
Sbjct: 361 -GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
           TEACK+LEEMVIKS WPCSNTFNTLI+GLCSVGK Y+AVM LEEMISQGQLP + VWN+L
Sbjct: 421 TEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSL 480

Query: 481 VSSLCFNVADTDMWSKVV 499
           VSSLC +VA  DM SKV+
Sbjct: 481 VSSLCCDVAGIDMCSKVL 497

BLAST of Carg04985 vs. ExPASy TrEMBL
Match: A0A6J1DVG7 (pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=3673 GN=LOC111024421 PE=4 SV=1)

HSP 1 Score: 870.9 bits (2249), Expect = 2.8e-249
Identity = 422/499 (84.57%), Postives = 464/499 (92.99%), Query Frame = 0

Query: 1   MTVRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGR 60
           MTVRWPR+LTPTHLSQIIRKQNNPFTA+QLF EAKCRYP Y+HNGPVYAAMI+ILGNSGR
Sbjct: 1   MTVRWPRMLTPTHLSQIIRKQNNPFTAFQLFKEAKCRYPGYRHNGPVYAAMIDILGNSGR 60

Query: 61  ISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNT 120
           + EMREVIDQMK DSC+CKDS+FSFAIKTYASHGLLEEGISLFKSLG FNCT+RTQTFNT
Sbjct: 61  VVEMREVIDQMKDDSCECKDSVFSFAIKTYASHGLLEEGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQ 180
           LLEILLNES+LDAACQLFQQSS+GW VKSRTQSLNLLMQSLCQR QSELALH+F+EMDYQ
Sbjct: 121 LLEILLNESRLDAACQLFQQSSYGWGVKSRTQSLNLLMQSLCQRAQSELALHIFQEMDYQ 180

Query: 181 SCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGE 240
            CYPNRLSYLILMKGLCQDG+L+EA+HLLYSMFWRIS+RGSGGDIVIYRTLL+ALC NGE
Sbjct: 181 GCYPNRLSYLILMKGLCQDGRLNEAVHLLYSMFWRISQRGSGGDIVIYRTLLYALCANGE 240

Query: 241 IEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSY 300
           +EQAVEILGKIL+KGLKAPKR HY IDL+ C+ SKLT+ EIK L NEALIKGGIPS  +Y
Sbjct: 241 VEQAVEILGKILRKGLKAPKRVHYRIDLDQCKNSKLTIDEIKRLFNEALIKGGIPSLATY 300

Query: 301 CAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETV 360
           CAMA+DLYNEN TDQGDKVVSHMLAKGF PPSS+YEAKAAALCKEGKVDDA++VI+EETV
Sbjct: 301 CAMAVDLYNENVTDQGDKVVSHMLAKGFRPPSSIYEAKAAALCKEGKVDDAMRVIDEETV 360

Query: 361 KGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRY 420
           KGSC+P+VALYNIVL GL   GKSTVA+E+LKKM KQVGLVADKETYS LVHGLC ENRY
Sbjct: 361 KGSCIPSVALYNIVLKGLSNEGKSTVALEYLKKMAKQVGLVADKETYSILVHGLCAENRY 420

Query: 421 TEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNAL 480
            EACK+LEEMVIKS+ PCS+TFNTLI GLCS+GK Y+AVM LEEMISQGQLPELSVWN+L
Sbjct: 421 IEACKMLEEMVIKSYRPCSDTFNTLIGGLCSIGKQYEAVMWLEEMISQGQLPELSVWNSL 480

Query: 481 VSSLCFNVADTDMWSKVVM 500
           VSS+CFNVA TD+W+  V+
Sbjct: 481 VSSVCFNVAGTDVWTSEVL 499

BLAST of Carg04985 vs. TAIR 10
Match: AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-159
Identity = 270/488 (55.33%), Postives = 366/488 (75.00%), Query Frame = 0

Query: 3   VRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRIS 62
           VRWPR+LTP+ LSQI++KQ NP TA +LF EAK R+P+Y HNG VYA MI+ILG S R+ 
Sbjct: 4   VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63

Query: 63  EMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLL 122
           EM+ VI++MK DSC+CKDS+F+  I+T++  G LE+ ISLFKSL  FNC + + +F+TLL
Sbjct: 64  EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123

Query: 123 EILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC 182
           + ++ ES+L+AAC +F++  +GWEV SR  +LNLLM+ LCQ  +S+LA  VF+EM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183

Query: 183 YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIE 242
           YP+R SY ILMKG C +GKL EA HLLYSMFWRIS++GSG DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243

Query: 243 QAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCA 302
            A+EILGKIL+KGLKAPKR ++ I+  +   S   +  +K L+ E LI+G IP  DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 303 MAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKG 362
           MA DL+ E +  +G++V+  M +KGF P   +Y AK  ALC+ GK+ +AV VI +E ++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 363 SCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTE 422
            C+PTV +YN+++ GLC  GKS  A+ +LKKM KQV  VA++ETY TLV GLCR+ ++ E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 423 ACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVS 482
           A +++EEM+IKSH+P   T++ +I+GLC + + Y+AVM LEEM+SQ  +PE SVW AL  
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483

Query: 483 SLCFNVAD 491
           S+CF   D
Sbjct: 484 SVCFCAID 491

BLAST of Carg04985 vs. TAIR 10
Match: AT1G05600.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-159
Identity = 270/488 (55.33%), Postives = 366/488 (75.00%), Query Frame = 0

Query: 3   VRWPRLLTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRIS 62
           VRWPR+LTP+ LSQI++KQ NP TA +LF EAK R+P+Y HNG VYA MI+ILG S R+ 
Sbjct: 4   VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63

Query: 63  EMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLL 122
           EM+ VI++MK DSC+CKDS+F+  I+T++  G LE+ ISLFKSL  FNC + + +F+TLL
Sbjct: 64  EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123

Query: 123 EILLNESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC 182
           + ++ ES+L+AAC +F++  +GWEV SR  +LNLLM+ LCQ  +S+LA  VF+EM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183

Query: 183 YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCDNGEIE 242
           YP+R SY ILMKG C +GKL EA HLLYSMFWRIS++GSG DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243

Query: 243 QAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSSDSYCA 302
            A+EILGKIL+KGLKAPKR ++ I+  +   S   +  +K L+ E LI+G IP  DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 303 MAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEEETVKG 362
           MA DL+ E +  +G++V+  M +KGF P   +Y AK  ALC+ GK+ +AV VI +E ++G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 363 SCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRENRYTE 422
            C+PTV +YN+++ GLC  GKS  A+ +LKKM KQV  VA++ETY TLV GLCR+ ++ E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 423 ACKLLEEMVIKSHWPCSNTFNTLIRGLCSVGKPYKAVMCLEEMISQGQLPELSVWNALVS 482
           A +++EEM+IKSH+P   T++ +I+GLC + + Y+AVM LEEM+SQ  +PE SVW AL  
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483

Query: 483 SLCFNVAD 491
           S+CF   D
Sbjct: 484 SVCFCAID 491

BLAST of Carg04985 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 5.1e-46
Identity = 122/548 (22.26%), Postives = 243/548 (44.34%), Query Frame = 0

Query: 9   LTPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVI 68
           L P H++ +I+ Q +P  A ++FN  + +   ++H    Y ++I  LG  G+   M EV+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 69  DQMKVD-SCQCKDSIFSFAIKTYASHGLLEEGISLFKSLGGFNCTDRTQTFNTLLEILLN 128
             M+ +      + ++  A+K Y   G ++E +++F+ +  ++C     ++N ++ +L++
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 129 ESQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLCQRGQSELALHVFKEMDYQSC----- 188
               D A +++ +      +     S  + M+S C+  +   AL +   M  Q C     
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 189 ------------------------------------------------------------ 248
                                                                       
Sbjct: 185 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 244

Query: 249 -----YPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGDIVIYRTLLFALCD 308
                 PN  +Y + ++GLCQ G+L  A+ ++  +      +G   D++ Y  L++ LC 
Sbjct: 245 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLI----EQGPKPDVITYNNLIYGLCK 304

Query: 309 NGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCLINEALIKGGIPSS 368
           N + ++A   LGK++ +GL+     +  +   YC+   + + E   ++ +A+  G +P  
Sbjct: 305 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE--RIVGDAVFNGFVPDQ 364

Query: 369 DSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCKEGKVDDAVKVIEE 428
            +Y ++   L +E ET++   + +  L KG  P   +Y      L  +G + +A ++  E
Sbjct: 365 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 424

Query: 429 ETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADKETYSTLVHGLCRE 486
            + KG  +P V  +NI++NGLC++G  + A   +K M+ + G   D  T++ L+HG   +
Sbjct: 425 MSEKG-LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQ 484

BLAST of Carg04985 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 8.7e-46
Identity = 130/541 (24.03%), Postives = 250/541 (46.21%), Query Frame = 0

Query: 10  TPTHLSQIIRKQNNPFTAYQLFNEAKCRYPNYQHNGPVYAAMINILGNSGRISEMREVID 69
           T   L   +R Q +   A +LFN A  + PN+     +Y  ++  LG SG   +M+++++
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108

Query: 70  QMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLFK-SLGGFNCTDRTQTFNTLLEILLNE 129
            MK   C+   S F   I++YA   L +E +S+    +  F     T  +N +L +L++ 
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168

Query: 130 SQLDAACQLFQQSSFGWEVKSRTQSLNLLMQSLC-------------------------- 189
           + L    ++       W +K    + N+L+++LC                          
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228

Query: 190 ---------QRGQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMF 249
                    + G  + AL + ++M    C  + +S  +++ G C++G++ +A++ +  M 
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288

Query: 250 WRISRRGSGGDIVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRI 309
              ++ G   D   + TL+  LC  G ++ A+EI+  +L++G       +  +    C++
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348

Query: 310 SKLTVTEIKCLINEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSS 369
            +  V E   ++++ + +   P++ +Y  +   L  EN+ ++  ++   + +KG  P   
Sbjct: 349 GE--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 408

Query: 370 VYEAKAAALCKEGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKK 429
            + +    LC       A+++ EE   KG C P    YN++++ LC  GK   A+  LK+
Sbjct: 409 TFNSLIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 468

Query: 430 MVKQVGLVADKETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNTFNTLIRGLCSVG 489
           M +  G      TY+TL+ G C+ N+  EA ++ +EM +      S T+NTLI GLC   
Sbjct: 469 M-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 528

Query: 490 KPYKAVMCLEEMISQGQLPELSVWNALVSSLCFNVADTDMWSKVVMIILGYAREPLIDTL 515
           +   A   +++MI +GQ P+   +N+L++  C    D    + +V  +     EP I T 
Sbjct: 529 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKAADIVQAMTSNGCEPDIVTY 579

BLAST of Carg04985 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 3.1e-43
Identity = 109/444 (24.55%), Postives = 216/444 (48.65%), Query Frame = 0

Query: 49  AAMINILGNSGRISEMREVIDQMKVDSCQCKDSIFSFAIKTYASHGLLEEGISLF-KSLG 108
           ++MI    NSG    + +++ ++++++    +  F    + Y    L ++ + LF + + 
Sbjct: 81  SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140

Query: 109 GFNCTDRTQTFNTLLEILLNESQLDAACQLFQ---QSSFGWEVKSRTQSLNLLMQSLCQR 168
            F C    ++FN++L +++NE       + +     S+    +     S NL++++LC+ 
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200

Query: 169 GQSELALHVFKEMDYQSCYPNRLSYLILMKGLCQDGKLHEAIHLLYSMFWRISRRGSGGD 228
              + A+ VF+ M  + C P+  +Y  LM GLC++ ++ EA+ LL  M       G    
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPS 260

Query: 229 IVIYRTLLFALCDNGEIEQAVEILGKILKKGLKAPKRAHYLIDLNYCRISKLTVTEIKCL 288
            VIY  L+  LC  G++ +  +++  +  KG    +  +  +    C   KL   +   L
Sbjct: 261 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSL 320

Query: 289 INEALIKGGIPSSDSYCAMAIDLYNENETDQGDKVVSHMLAKGFWPPSSVYEAKAAALCK 348
           +   +    IP+  +Y  +   L  +       +++S M  +G+     +Y    + L K
Sbjct: 321 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 380

Query: 349 EGKVDDAVKVIEEETVKGSCVPTVALYNIVLNGLCRVGKSTVAMEFLKKMVKQVGLVADK 408
           EGK ++A+ +  +   KG C P + +Y+++++GLCR GK   A E L +M+   G + + 
Sbjct: 381 EGKAEEAMSLWRKMAEKG-CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNA 440

Query: 409 ETYSTLVHGLCRENRYTEACKLLEEMVIKSHWPCSNT---FNTLIRGLCSVGKPYKAVMC 468
            TYS+L+ G  +     EA ++ +EM       CS     ++ LI GLC VG+  +A+M 
Sbjct: 441 YTYSSLMKGFFKTGLCEEAVQVWKEM---DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 500

Query: 469 LEEMISQGQLPELSVWNALVSSLC 486
             +M++ G  P+   +++++  LC
Sbjct: 501 WSKMLTIGIKPDTVAYSSIIKGLC 513

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025356.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6592948.12.1e-29199.80Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022959953.17.8e-29199.60pentatricopeptide repeat-containing protein At1g05600 [Cucurbita moschata] >XP_0... [more]
XP_023514107.12.5e-28999.00pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucurbita pepo... [more]
XP_023004266.16.2e-28898.20pentatricopeptide repeat-containing protein At1g05600 [Cucurbita maxima] >XP_023... [more]
Match NameE-valueIdentityDescription
Q9SYK11.7e-15855.33Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX... [more]
Q9CA587.2e-4522.26Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
Q9LFF11.2e-4424.03Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
O494364.3e-4224.55Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9FIX31.7e-3824.44Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1H9J73.8e-29199.60pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita moschata OX=3... [more]
A0A6J1KU443.0e-28898.20pentatricopeptide repeat-containing protein At1g05600 OS=Cucurbita maxima OX=366... [more]
A0A1S4E2N87.0e-25386.55pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo... [more]
A0A5D3DM627.0e-25386.55Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1DVG72.8e-24984.57pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=... [more]
Match NameE-valueIdentityDescription
AT1G05600.11.2e-15955.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05600.21.2e-15955.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74580.15.1e-4622.26Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.18.7e-4624.03Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.13.1e-4324.55Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 226..256
e-value: 0.0039
score: 17.3
coord: 48..76
e-value: 0.016
score: 15.4
coord: 86..107
e-value: 0.77
score: 10.2
coord: 441..469
e-value: 3.2E-6
score: 27.0
coord: 341..357
e-value: 0.96
score: 9.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 188..212
e-value: 0.0026
score: 15.8
coord: 226..257
e-value: 0.0026
score: 15.8
coord: 154..185
e-value: 5.3E-5
score: 21.1
coord: 47..77
e-value: 7.2E-5
score: 20.7
coord: 370..403
e-value: 1.4E-5
score: 22.9
coord: 441..470
e-value: 8.9E-7
score: 26.7
coord: 406..431
e-value: 5.7E-7
score: 27.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 366..416
e-value: 2.5E-11
score: 43.6
coord: 154..198
e-value: 1.9E-10
score: 40.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 150..184
score: 9.580234
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 367..397
score: 9.076014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 44..78
score: 8.571795
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 438..472
score: 10.446177
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 403..437
score: 11.454616
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 10.424253
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 142..282
e-value: 8.4E-19
score: 70.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 283..382
e-value: 1.3E-9
score: 39.6
coord: 383..494
e-value: 2.6E-25
score: 90.8
coord: 9..130
e-value: 1.4E-16
score: 62.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 519..546
NoneNo IPR availablePANTHERPTHR47932:SF36PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..498
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 1..498

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04985-RACarg04985-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding