Carg04936 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg04936
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	rRNA N-glycosidase
Location	Carg_Chr08: 543199 .. 544131 (+)
RNA-Seq Expression	Carg04936
Synteny	Carg04936

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTTAACACTCATCCAGTTGAGGCCAACGTGCGCTTCGACTTGTCCAGTGCCACAAGCTCATCTTACAAAGCTTTTATCAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGACATTCCTGTGTTACTTTCGACTGTAATGGACTCGAGGCGCTTCATACTAATAGATCTCGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTATATATCGTGGCATACAGCACAGGCACAGTGTCCTACTTTTTTCAGCAAGTTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATACACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAGCTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACCACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCGGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCTAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTGACTTCGAACGTTGTGACCCAGAACATCAAGCTGCTGCTGAACATTGGTGCAACAGTTGATACAATGGCCGCCAACGATGTGGATGAGATGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGGAGATTGGCCGGCATGCAAATTATGTATCAGTGTAA

mRNA sequence

ATGATCAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTTAACACTCATCCAGTTGAGGCCAACGTGCGCTTCGACTTGTCCAGTGCCACAAGCTCATCTTACAAAGCTTTTATCAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGACATTCCTGTGTTACTTTCGACTGTAATGGACTCGAGGCGCTTCATACTAATAGATCTCGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTATATATCGTGGCATACAGCACAGGCACAGTGTCCTACTTTTTTCAGCAAGTTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATACACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAGCTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACCACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCGGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCTAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTGACTTCGAACGTTGTGACCCAGAACATCAAGCTGCTGCTGAACATTGGTGCAACAGTTGATACAATGGCCGCCAACGATGTGGATGAGATGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGGAGATTGGCCGGCATGCAAATTATGTATCAGTGTAA

Coding sequence (CDS)

ATGATCAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTTAACACTCATCCAGTTGAGGCCAACGTGCGCTTCGACTTGTCCAGTGCCACAAGCTCATCTTACAAAGCTTTTATCAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGACATTCCTGTGTTACTTTCGACTGTAATGGACTCGAGGCGCTTCATACTAATAGATCTCGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTATATATCGTGGCATACAGCACAGGCACAGTGTCCTACTTTTTTCAGCAAGTTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATACACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAGCTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACCACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCGGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCTAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTGACTTCGAACGTTGTGACCCAGAACATCAAGCTGCTGCTGAACATTGGTGCAACAGTTGATACAATGGCCGCCAACGATGTGGATGAGATGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGGAGATTGGCCGGCATGCAAATTATGTATCAGTGTAA

Protein sequence

MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVEIGRHANYVSV

Homology

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BLAST of Carg04936 vs. NCBI nr
Match: KAG7025308.1 (hypothetical protein SDJN02_11803, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 588.6 bits (1516), Expect = 3.2e-164
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL
Sbjct: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG
Sbjct: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE
Sbjct: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE 300

Query: 301 IGRHANYVSV 311
           IGRHANYVSV
Sbjct: 301 IGRHANYVSV 310

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BLAST of Carg04936 vs. NCBI nr
Match: KAG6592902.1 (hypothetical protein SDJN03_12378, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 588.2 bits (1515), Expect = 4.2e-164
Identity = 309/310 (99.68%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL
Sbjct: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG
Sbjct: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSG+PIRLSSCGHEMERKSVE
Sbjct: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGIPIRLSSCGHEMERKSVE 300

Query: 301 IGRHANYVSV 311
           IGRHANYVSV
Sbjct: 301 IGRHANYVSV 310

[Close]

BLAST of Carg04936 vs. NCBI nr
Match: XP_022959960.1 (ribosome-inactivating protein cucurmosin [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 1.5e-158
Identity = 303/311 (97.43%), Postives = 304/311 (97.75%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M KSLALSFLFL IFLNT P +ANVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVL
Sbjct: 1   MNKSLALSFLFLTIFLNTRPADANVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG
Sbjct: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAAN-DVDEMTSGVPIRLSSCGHEMERKSV 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAAN DVDEMTSGVPIRLSSCGHEMERKSV
Sbjct: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDDVDEMTSGVPIRLSSCGHEMERKSV 300

Query: 301 EIGRHANYVSV 311
           E GRHANYVSV
Sbjct: 301 ENGRHANYVSV 311

[Close]

BLAST of Carg04936 vs. NCBI nr
Match: XP_023005049.1 (ribosome-inactivating protein cucurmosin [Cucurbita maxima])

HSP 1 Score: 564.7 bits (1454), Expect = 5.0e-157
Identity = 297/310 (95.81%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M KSLALSFLFLAIFLNT P +ANVRFDLS ATSSSYK FIKNLREALPKDGKVYDI VL
Sbjct: 11  MNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVL 70

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDS+RFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKG
Sbjct: 71  LSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKG 130

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 131 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 190

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 191 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 250

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDT AANDVDE+TSGVPIRLSSCGHEMERKSV+
Sbjct: 251 GNRVQITNVTSNVVTQNIKLLLNIGATVDTTAANDVDEVTSGVPIRLSSCGHEMERKSVQ 310

Query: 301 IGRHANYVSV 311
            GRHANYVSV
Sbjct: 311 NGRHANYVSV 320

[Close]

BLAST of Carg04936 vs. NCBI nr
Match: P84531.2 (RecName: Full=Ribosome-inactivating protein cucurmosin; AltName: Full=rRNA N-glycosidase [Cucurbita moschata])

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-125
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. ExPASy Swiss-Prot
Match: P84531 (Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata OX=3662 PE=1 SV=2)

HSP 1 Score: 460.3 bits (1183), Expect = 1.7e-128
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. ExPASy Swiss-Prot
Match: P29339 (Ribosome-inactivating protein momordin II OS=Momordica balsamina OX=3672 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.1e-85
Identity = 171/280 (61.07%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL+DL +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLDLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. ExPASy Swiss-Prot
Match: P24817 (Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN=MAP30 PE=1 SV=2)

HSP 1 Score: 314.7 bits (805), Expect = 1.2e-84
Identity = 170/280 (60.71%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. ExPASy Swiss-Prot
Match: P09989 (Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 3.3e-79
Identity = 169/279 (60.57%), Postives = 204/279 (73.12%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           MI+ L LS L L +FL T  VE +V F LS ATSSSY  FI NLR+ALP + K+YDIP+L
Sbjct: 1   MIRFLVLSLLILTLFLTTPAVEGDVSFRLSGATSSSYGVFISNLRKALPNERKLYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPA-QAPKLLFK 120
            S++  S+R+ LI L NY  ++I+ AIDV NVYI+ Y  G  SYFF +  A +A K +FK
Sbjct: 61  RSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFK 120

Query: 121 GTQQR-TLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQT 180
              ++ TLPY+GNYE LQTAA K+RENI LGLPALDSAITTLF+YNA +AASAL+VLIQ+
Sbjct: 121 DAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQS 180

Query: 181 TSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILID 240
           TSEAAR+++IE QI   V   F PS  IISLEN+WSALSKQIQIA   NGQFE+PV+LI+
Sbjct: 181 TSEAARYKFIEQQIGKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLIN 240

Query: 241 PQGNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVD 278
            Q  RV ITNV + VVT NI LLLN     + MAA D D
Sbjct: 241 AQNQRVTITNVDAGVVTSNIALLLN----RNNMAAMDDD 275

[Close]

BLAST of Carg04936 vs. ExPASy Swiss-Prot
Match: P24478 (Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=1 SV=2)

HSP 1 Score: 292.7 bits (748), Expect = 4.8e-78
Identity = 167/279 (59.86%), Postives = 202/279 (72.40%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           MI+ L  S L L +FL    VE +V F LS ATSSSY  FI NLR+ALP + K+YDIP+L
Sbjct: 1   MIRFLVFSLLILTLFLTAPAVEGDVSFRLSGATSSSYGVFISNLRKALPYERKLYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPA-QAPKLLFK 120
            ST+  S+R+ LI L NY  ++I+ AIDV NVY++ Y  G  SYFF +  A +A K +FK
Sbjct: 61  RSTLPGSQRYALIHLTNYADETISVAIDVTNVYVMGYRAGDTSYFFNEASATEAAKYVFK 120

Query: 121 GTQQR-TLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQT 180
             +++ TLPY+GNYE LQ AA K+RENI LGLPALDSAITTLF+YNA +AASAL+VLIQ+
Sbjct: 121 DAKRKVTLPYSGNYERLQIAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQS 180

Query: 181 TSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILID 240
           TSEAAR+++IE QI   V   F PS  IISLEN+WSALSKQIQIA   NGQFETPV+LI+
Sbjct: 181 TSEAARYKFIEQQIGKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFETPVVLIN 240

Query: 241 PQGNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVD 278
            Q  RV ITNV + VVT NI LLLN     + MAA D D
Sbjct: 241 AQNQRVTITNVDAGVVTSNIALLLN----RNNMAAIDDD 275

[Close]

BLAST of Carg04936 vs. ExPASy TrEMBL
Match: A0A6J1H7R8 (rRNA N-glycosidase OS=Cucurbita moschata OX=3662 GN=LOC111460858 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.5e-159
Identity = 303/311 (97.43%), Postives = 304/311 (97.75%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M KSLALSFLFL IFLNT P +ANVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVL
Sbjct: 1   MNKSLALSFLFLTIFLNTRPADANVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG
Sbjct: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAAN-DVDEMTSGVPIRLSSCGHEMERKSV 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAAN DVDEMTSGVPIRLSSCGHEMERKSV
Sbjct: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDDVDEMTSGVPIRLSSCGHEMERKSV 300

Query: 301 EIGRHANYVSV 311
           E GRHANYVSV
Sbjct: 301 ENGRHANYVSV 311

[Close]

BLAST of Carg04936 vs. ExPASy TrEMBL
Match: A0A6J1KY21 (rRNA N-glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111498157 PE=3 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 2.4e-157
Identity = 297/310 (95.81%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M KSLALSFLFLAIFLNT P +ANVRFDLS ATSSSYK FIKNLREALPKDGKVYDI VL
Sbjct: 11  MNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVL 70

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
           LSTVMDS+RFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKG
Sbjct: 71  LSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKG 130

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS
Sbjct: 131 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 190

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ
Sbjct: 191 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 250

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMTSGVPIRLSSCGHEMERKSVE 300
           GNRVQITNVTSNVVTQNIKLLLNIGATVDT AANDVDE+TSGVPIRLSSCGHEMERKSV+
Sbjct: 251 GNRVQITNVTSNVVTQNIKLLLNIGATVDTTAANDVDEVTSGVPIRLSSCGHEMERKSVQ 310

Query: 301 IGRHANYVSV 311
            GRHANYVSV
Sbjct: 311 NGRHANYVSV 320

[Close]

BLAST of Carg04936 vs. ExPASy TrEMBL
Match: D0VWS7 (rRNA N-glycosidase OS=Cucurbita moschata OX=3662 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 6.4e-126
Identity = 242/244 (99.18%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 24  NVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 83
           NVRFDLSSATSSSYK FIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 84  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 143
           TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 144 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 203
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 204 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 263
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 264 IGAT 268
           IGAT
Sbjct: 241 IGAT 244

[Close]

BLAST of Carg04936 vs. ExPASy TrEMBL
Match: W0LQW1 (rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=2 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 8.7e-83
Identity = 171/280 (61.07%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI+N R  LP   KVYDIP+L
Sbjct: 1   MVKCLVLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIENFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVARYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

[Close]

BLAST of Carg04936 vs. ExPASy TrEMBL
Match: Q5PZ05 (rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 4.3e-82
Identity = 170/280 (60.71%), Postives = 212/280 (75.71%), Query Frame = 0


Query: 1   MIKSLALSFLFLAIFLNTHPVEANVRFDLSSATSSSYKAFIKNLREALPKDGKVYDIPVL 60
           M+K L LSFL +AIF+     + +V FDLS+AT+ +Y  FI++ R  LP   KVYDIP+L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 61  LSTVMDSRRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKG 120
            ST+ DSRRFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 121 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 180
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 181 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 240
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 241 GNRVQITNVTSNVVTQNIKLLLNIGATVDTMAANDVDEMT 281
           G R Q+TNV S+VV  NIKLLLN  A+  T   N +  MT
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS--TADENFITTMT 278

The following BLAST results are available for this feature:

BLAST of Carg04936 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025308.1	3.2e-164	100.00	hypothetical protein SDJN02_11803, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6592902.1	4.2e-164	99.68	hypothetical protein SDJN03_12378, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022959960.1	1.5e-158	97.43	ribosome-inactivating protein cucurmosin [Cucurbita moschata]	[more]
XP_023005049.1	5.0e-157	95.81	ribosome-inactivating protein cucurmosin [Cucurbita maxima]	[more]
P84531.2	1.3e-125	99.18	RecName: Full=Ribosome-inactivating protein cucurmosin; AltName: Full=rRNA N-gly...	[more]

BLAST of Carg04936 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P84531	1.7e-128	99.18	Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata OX=3662 PE=1 SV=2	[more]
P29339	3.1e-85	61.07	Ribosome-inactivating protein momordin II OS=Momordica balsamina OX=3672 PE=3 SV...	[more]
P24817	1.2e-84	60.71	Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia OX=3673 GN...	[more]
P09989	3.3e-79	60.57	Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii OX=...	[more]
P24478	4.8e-78	59.86	Ribosome-inactivating protein karasurin-C OS=Trichosanthes kirilowii OX=3677 PE=...	[more]

BLAST of Carg04936 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7R8	7.5e-159	97.43	rRNA N-glycosidase OS=Cucurbita moschata OX=3662 GN=LOC111460858 PE=3 SV=1	[more]
A0A6J1KY21	2.4e-157	95.81	rRNA N-glycosidase OS=Cucurbita maxima OX=3661 GN=LOC111498157 PE=3 SV=1	[more]
D0VWS7	6.4e-126	99.18	rRNA N-glycosidase OS=Cucurbita moschata OX=3662 PE=1 SV=1	[more]
W0LQW1	8.7e-83	61.07	rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=2 SV=1	[more]
Q5PZ05	4.3e-82	60.71	rRNA N-glycosidase OS=Momordica charantia OX=3673 PE=3 SV=1	[more]

BLAST of Carg04936 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017989	Ribosome-inactivating protein type 1/2	PRINTS	PR00396	SHIGARICIN	coord: 82..97 score: 50.99 coord: 172..192 score: 66.67 coord: 204..221 score: 51.75 coord: 35..48 score: 44.55 coord: 143..157 score: 57.02
IPR016139	Ribosome-inactivating protein, subdomain 2	GENE3D	4.10.470.10	Ricin (A Subunit), domain 2	coord: 184..268 e-value: 1.8E-30 score: 106.6
IPR001574	Ribosome-inactivating protein	PFAM	PF00161	RIP	coord: 33..221 e-value: 1.9E-38 score: 132.1
IPR001574	Ribosome-inactivating protein	PANTHER	PTHR33453	FAMILY NOT NAMED	coord: 24..260
IPR016138	Ribosome-inactivating protein, subdomain 1	GENE3D	3.40.420.10	Ricin (A subunit), domain 1	coord: 24..183 e-value: 1.3E-48 score: 166.8
None	No IPR available	PANTHER	PTHR33453:SF14	RRNA N-GLYCOSIDASE	coord: 24..260
IPR017988	Ribosome-inactivating protein conserved site	PROSITE	PS00275	SHIGA_RICIN	coord: 176..192
IPR036041	Ribosome-inactivating protein superfamily	SUPERFAMILY	56371	Ribosome inactivating proteins (RIP)	coord: 25..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04936-RA	Carg04936-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0035821	modulation of process of other organism
biological_process	GO:0017148	negative regulation of translation
molecular_function	GO:0030598	rRNA N-glycosylase activity
molecular_function	GO:0090729	toxin activity