Carg04649 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATGATAGTTTGCTTTTAGTACATAAGAAGGACATTGAAGCCCACATGTATTGCCGCAGAAGAAAGCCACCAGCCCTTGGCGGTAAATTTGCTAAATCATCGCATTCAGGCCTCCGTTTTCCGGCATGGACTTGTTGGGCGGTGGCCATGGCGGCCTCTGGGGCTGGAACTTCTTCCTTCCAGATTCCAATACTTCTCGAAACAAGAGAAGAAGCTTCGAAGCGAAATCGTCCAACTCTTTGCAGGCAACTGGTGGATCTGGTTACCAGTTCCCTCTGAAGCAGTCCTTGACGGCCGGCTGTCTCACTCTCTCCGGCGACACTATTGCACAGTTGGTAGGTCGATGGCGTAAGGAAATCGCTCTGAATTCCAGTTCTCTCGAGAAGGTAAACTTCGGTCTCTTTGATTCTGGACTCGGAGTAATTAGTTTCTTGAAATTTTGAAATTCGATTTCTGTTGTAATCGCTGATTCAGAATATTGTCTGTCCTTTTCAATTCCGTGTTTGAACTTGAACCAGCCAATTATCTTGGAGTGGAATTGTAGAATGGTTCTTTCGTTCTGCCATTGCGAAAGTGCTGCTAGCAAATATACTTATTTTCATTTCGTGTACAGTCGTTAACTTTTTTAGGGCAATTGTTCTGTGCACGCTGGATCTTCCGCTTCTAGTCTACTGTGATTCTGTTTGAAGCCTCATTGATGCATTTTTGTGATGTTTTTAGCTAACTTTTAAGACCAAAACTCTTCTTTCAGGATGGTGTTTCGAACATATTTTCAGAACATGATTGGATTCGCTCTTTGCGTATGCTTTCTTATGGGATTCTGATTTATGGCCCGGGATCCTTTGCATGGTACAACTATCTCGATCATGTTATGCCCAAGCAATCGGTGGAAAATCTTATGCTTAAGGTACAGCTGGTTGTGGCTTTGGTGTCAGTTAGTAATTCTTTTAACATACAATCGAGCTCTTAGCGGCTCAAGGTAAGCATTAAGCATACATTGGCAGTTCTATGAACATTTTTCTTAATTGATTGTTGTTCAGGTTCTCCTGAATCAAATTGTTCTTGGTCCATGCGTCATTGGTGCTGTATTTGCATGGAACAATATCTGGCTAGGAAAAATCTCCCAGCTTCCTGCAATGTACCGGAAAGATGCTCTTCCAACATTGTTATATGGTAAAAACGTCTCGAACTAGGACTAGGACCTATTTTTTGCTTCAAGGACATAAGTCTAATAAGATTATTTTTTATCTCTTTGCAGGGTTTAGGTTCTGGATTCCTGTCAGCATACTGAACTTTTGGTAATTTTTCATCTTTAGTTATCCCCCAGCGGGCTCCCTTTCAGTTACTCGAGCTACATTTAAACAAAACGCTAACCTTTCATGAGGTTGAATGAAAGAACAACCTAACAACATTTGAAACCACATGTTGTAACATGGAACAGTGCCTTTAGTTAATTATAGCATCTGATATCGTTAACCCTTGTAGTCGATGAGTTAAAACTTATAACACGATGTCATTTTTTCGTTTGGAATAGATTAGACATCACAATTTACACGTTTAACTTTTAATTTTCGTTTGGAATAGATTAGACATCACAATTTACACGTTTAACTTTTAATCTGCCTTACTTTTCTTCTGCATAACCCACCATGACAATGAAGTTGGTTTGCAGAAATCTTTGTACCACAAGATTTAGATCTGGTTTCTTTCCTTTGGGCCTAACTCAAGAATTTGAGAGTCAGCTTTTCTTTTGATAGCACTGGCAACTGCATGTTCATGTTCTGAATTATTAGTGATTGGTGACTGAGTACATTGTCCTGAATTTGACCAAACCATGTGTGGCATCGTACAGGGTTGTGCCTCTCCAGGCCCGGGTGGCTTTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAGTGATTCCATCTCGAAAAATCTTAAGATCCATGTGTGAAGACTGCACTTGGTGGCTTTATAATATAGTAAGAAGGCAAGCCGCTTGTCATCTGTAGTTCAGTTTACGGACTCAATTCTCAGTGTAGAGAATAGTTGGGTAGATCTTTAAAAGCTATCATTCTACTGATGAGTATAGGCTTTTGATCTTGCTGATGACCATTGCTTAACAATTTAAATTAGATGGAGCTTTGAACTTGGGCTCAAAATATATGGACGGGGCCATTTTAAAAATAAGTTTGTCCCAACATGTTCAACGCCATGTTTGAAAATTAAGAAAGAACATAACATCCAGGCCAGGACATGTGTTTGGCTGTGTCTTTCCCTCTTTTACTGTTTGTTTCCCTCTATCTCTTCTTATTTTCTTTTTCAACTCTTCAACTAACTCTCCACTTTGAATCGCATCCAAGTAAGTTTTTCTTAGAATTTTAGGATCAATTTTATGGATTCCGTTGATTTTTTTTTTTTTAT CAATGATAGTTTGCTTTTAGTACATAAGAAGGACATTGAAGCCCACATGTATTGCCGCAGAAGAAAGCCACCAGCCCTTGGCGGTAAATTTGCTAAATCATCGCATTCAGGCCTCCGTTTTCCGGCATGGACTTGTTGGGCGGTGGCCATGGCGGCCTCTGGGGCTGGAACTTCTTCCTTCCAGATTCCAATACTTCTCGAAACAAGAGAAGAAGCTTCGAAGCGAAATCGTCCAACTCTTTGCAGGCAACTGGTGGATCTGGTTACCAGTTCCCTCTGAAGCAGTCCTTGACGGCCGGCTGTCTCACTCTCTCCGGCGACACTATTGCACAGTTGGTAGGTCGATGGCGTAAGGAAATCGCTCTGAATTCCAGTTCTCTCGAGAAGGATGGTGTTTCGAACATATTTTCAGAACATGATTGGATTCGCTCTTTGCGTATGCTTTCTTATGGGATTCTGATTTATGGCCCGGGATCCTTTGCATGGTACAACTATCTCGATCATGTTATGCCCAAGCAATCGGTGGAAAATCTTATGCTTAAGGTTCTCCTGAATCAAATTGTTCTTGGTCCATGCGTCATTGGTGCTGTATTTGCATGGAACAATATCTGGCTAGGAAAAATCTCCCAGCTTCCTGCAATGTACCGGAAAGATGCTCTTCCAACATTGTTATATGGGTTTAGGTTCTGGATTCCTGTCAGCATACTGAACTTTTGGGTTGTGCCTCTCCAGGCCCGGGTGGCTTTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAGTGATTCCATCTCGAAAAATCTTAAGATCCATGTGTGAAGACTGCACTTGGTGGCTTTATAATATAGTAAGAAGGCAAGCCGCTTGTCATCTGTAGTTCAGTTTACGGACTCAATTCTCAGTGTAGAGAATAGTTGGGTAGATCTTTAAAAGCTATCATTCTACTGATGAGTATAGGCTTTTGATCTTGCTGATGACCATTGCTTAACAATTTAAATTAGATGGAGCTTTGAACTTGGGCTCAAAATATATGGACGGGGCCATTTTAAAAATAAGTTTGTCCCAACATGTTCAACGCCATGTTTGAAAATTAAGAAAGAACATAACATCCAGGCCAGGACATGTGTTTGGCTGTGTCTTTCCCTCTTTTACTGTTTGTTTCCCTCTATCTCTTCTTATTTTCTTTTTCAACTCTTCAACTAACTCTCCACTTTGAATCGCATCCAAGTAAGTTTTTCTTAGAATTTTAGGATCAATTTTATGGATTCCGTTGATTTTTTTTTTTTTAT ATGGACTTGTTGGGCGGTGGCCATGGCGGCCTCTGGGGCTGGAACTTCTTCCTTCCAGATTCCAATACTTCTCGAAACAAGAGAAGAAGCTTCGAAGCGAAATCGTCCAACTCTTTGCAGGCAACTGGTGGATCTGGTTACCAGTTCCCTCTGAAGCAGTCCTTGACGGCCGGCTGTCTCACTCTCTCCGGCGACACTATTGCACAGTTGGTAGGTCGATGGCGTAAGGAAATCGCTCTGAATTCCAGTTCTCTCGAGAAGGATGGTGTTTCGAACATATTTTCAGAACATGATTGGATTCGCTCTTTGCGTATGCTTTCTTATGGGATTCTGATTTATGGCCCGGGATCCTTTGCATGGTACAACTATCTCGATCATGTTATGCCCAAGCAATCGGTGGAAAATCTTATGCTTAAGGTTCTCCTGAATCAAATTGTTCTTGGTCCATGCGTCATTGGTGCTGTATTTGCATGGAACAATATCTGGCTAGGAAAAATCTCCCAGCTTCCTGCAATGTACCGGAAAGATGCTCTTCCAACATTGTTATATGGGTTTAGGTTCTGGATTCCTGTCAGCATACTGAACTTTTGGGTTGTGCCTCTCCAGGCCCGGGTGGCTTTCATGTCTGTGGCCTCTATATTTTGGAACTTCTATTTGTCTTCAACCATGAGTAAGTGA MDLLGGGHGGLWGWNFFLPDSNTSRNKRRSFEAKSSNSLQATGGSGYQFPLKQSLTAGCLTLSGDTIAQLVGRWRKEIALNSSSLEKDGVSNIFSEHDWIRSLRMLSYGILIYGPGSFAWYNYLDHVMPKQSVENLMLKVLLNQIVLGPCVIGAVFAWNNIWLGKISQLPAMYRKDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSVASIFWNFYLSSTMSK Homology
BLAST of Carg04649 vs. NCBI nr
Match: KAG6589283.1 (Protein Mpv17, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022979.1 Protein Mpv17 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 462.6 bits (1189), Expect = 1.9e-126 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
BLAST of Carg04649 vs. NCBI nr
Match: XP_022930888.1 (protein Mpv17 isoform X1 [Cucurbita moschata] >XP_023529297.1 protein Mpv17 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 459.9 bits (1182), Expect = 1.2e-125 Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0
BLAST of Carg04649 vs. NCBI nr
Match: XP_022989118.1 (protein Mpv17 [Cucurbita maxima]) HSP 1 Score: 454.1 bits (1167), Expect = 6.8e-124 Identity = 221/225 (98.22%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Carg04649 vs. NCBI nr
Match: XP_022930889.1 (protein Mpv17 isoform X2 [Cucurbita moschata]) HSP 1 Score: 407.9 bits (1047), Expect = 5.6e-110 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Carg04649 vs. NCBI nr
Match: XP_022147925.1 (protein Mpv17 [Momordica charantia]) HSP 1 Score: 397.1 bits (1019), Expect = 9.9e-107 Identity = 193/232 (83.19%), Postives = 205/232 (88.36%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy Swiss-Prot
Match: Q5TZ51 (Protein Mpv17 OS=Danio rerio OX=7955 GN=mpv17 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15 Identity = 50/174 (28.74%), Postives = 84/174 (48.28%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy Swiss-Prot
Match: Q4P9K6 (Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SYM1 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14 Identity = 58/174 (33.33%), Postives = 80/174 (45.98%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy Swiss-Prot
Match: Q5BK62 (Protein Mpv17 OS=Rattus norvegicus OX=10116 GN=Mpv17 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13 Identity = 53/169 (31.36%), Postives = 80/169 (47.34%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy Swiss-Prot
Match: P19258 (Protein Mpv17 OS=Mus musculus OX=10090 GN=Mpv17 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13 Identity = 54/169 (31.95%), Postives = 81/169 (47.93%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13 Identity = 49/174 (28.16%), Postives = 79/174 (45.40%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy TrEMBL
Match: A0A6J1EWS4 (protein Mpv17 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1) HSP 1 Score: 459.9 bits (1182), Expect = 6.0e-126 Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy TrEMBL
Match: A0A6J1JPB9 (protein Mpv17 OS=Cucurbita maxima OX=3661 GN=LOC111486282 PE=3 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 3.3e-124 Identity = 221/225 (98.22%), Postives = 222/225 (98.67%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy TrEMBL
Match: A0A6J1ESS7 (protein Mpv17 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437238 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy TrEMBL
Match: A0A6J1D1H6 (protein Mpv17 OS=Momordica charantia OX=3673 GN=LOC111016738 PE=3 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 4.8e-107 Identity = 193/232 (83.19%), Postives = 205/232 (88.36%), Query Frame = 0
BLAST of Carg04649 vs. ExPASy TrEMBL
Match: A0A1S3BLI4 (protein sym-1 OS=Cucumis melo OX=3656 GN=LOC103491365 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99 Identity = 182/229 (79.48%), Postives = 200/229 (87.34%), Query Frame = 0
BLAST of Carg04649 vs. TAIR 10
Match: AT2G42770.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 305.1 bits (780), Expect = 4.8e-83 Identity = 150/233 (64.38%), Postives = 181/233 (77.68%), Query Frame = 0
BLAST of Carg04649 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 78.6 bits (192), Expect = 7.3e-15 Identity = 56/214 (26.17%), Postives = 100/214 (46.73%), Query Frame = 0
BLAST of Carg04649 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 65.9 bits (159), Expect = 4.9e-11 Identity = 36/141 (25.53%), Postives = 66/141 (46.81%), Query Frame = 0
BLAST of Carg04649 vs. TAIR 10
Match: AT5G19750.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 65.9 bits (159), Expect = 4.9e-11 Identity = 60/220 (27.27%), Postives = 94/220 (42.73%), Query Frame = 0
BLAST of Carg04649 vs. TAIR 10
Match: AT1G52870.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04 Identity = 41/183 (22.40%), Postives = 74/183 (40.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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