Carg04401 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTGGAACTGGAAGAGAATGATGTTCAGGAAAAGAAGATTAGGATTGGAGTTTGCGTGATGGTAAAGAAGGTGAAATGCGACGCCAAGCTTAATCATGTCCGCATCTCACTCTGAAACAGAACTCTATTTTGTTTGCTTATCATCTTACTCTGTGAACTTCTGCACTGCATAGGTGTCCTCGTCGCCAATGAGACAGATATTAGATAGATTGGAGGCCTTTGGTGAATTTGAGGTACGTTGTTTTTTAATCATCCAACCGTGTTTCTTATATTTTCGAAGTTCAAATCTCCTATAGTTGCTACAAGTTTCATTGCACGCGCTAGTTTTTCCCTCCCTGTTATTAATGAATGACAGATGGACTATGAAGACCTAGTTGTTTAAGAAATGAAGTAGTGTTATAATTTCTCCTTGGCAGTGTGGTTATATCTCATATCTTGTAGAGGTTTGCGAAATTAAGCTTTCACTGGTGTATATTTGCGGAGATTTAATTTTTCTGATTGTATTATAAGTTTATGCTTTTGCGGATGTTTATTTCTCATTGGTCTTTTTCATATGTGGACTGATTGTAGATAATAGTATTTGGAGACAAGGTCATTCTAGAAGATCCAATAGAGAGGTATAGTATATGGTTACAACCAGAATATAACTATTTTGAGGTCGCGCATTCAATTTTTTTCATATTTGGTTTTGTATTATCGCATGTATTTCATGAGAAAGGTTAGCTGCTATTTTGACCCTCTCCTTTCTTATAACCATGAGCAGACTCTTCATCACTTGGTACATTGAGAAGTTTTACATTCTCTTGCCAATATTTAACCCGCCACGTGCTAAATAACTTGTTCTACTCTGGCCAGTGAATATCACATCTTTGGCTATGGATTTACTGTTCAAATTGTGATGCTATCTTGAACGAACTTCAGACAAGTAGCCTTTTAGAAGGGAAAAGATGGGCTACCGAAGTTTTAGCTACTTCTTGGGGAGTTTGGTTTGAAAGGAAGAGATGTTTTGATTTTTTAAAAGAATAAGTTAGTGGCATACAGATAGTTGGGAATATATTCACTTAAATATTACTTTACGGGCTTTTTGATTACAAAAGAGAGAACATATATCTTTTAACTTGCGGTTTTTTTAATTACAAAAGAGAACATAAATCTTTTCGCATTATTTAAGGGGTGGAGATCTTACTAATTTGAAGGTCTCTTCTCTTTCCTTGCCTTCCATTTTGGGGATAGTTTTAATCATTTTAATTTAGCACGTGTATATTCACATATTTCTTTCTTTTCTTTTTTCCAAATTATTTCTACTAAACATTGGATAGATTATTCGTTTCTACTAAATAAACATTGGATATATGACATGGAGGTGAAATTTTAGAGTTTGAGGTCTTAGACATAATAGGCATAATAACTCAGATAGTGTGCATGTGTGTTGCTGGTGAATCAAGCTTACTGTACTTGATGAATTATTAGATTCTTCTTGTCTATACGTTTAACTATCAGAATTCTTGTTTCAGATGGCCAGATTGTGATTGCTTGATTGCCTTTTACTCCAGTGGCTATCCATTGGAGAAGGTTGAAGAGTATGCTGCTCTTCGCAAGTAAGCTTTACTTTTTACTCATTTATTAAGTACATTGTGTTCATCAATAAATTATTTATCAGTGCTTCATCCATGCTAGTTCTTGCGAGTATTGACAAAGTCTTCCTAGGCCTTTTACTGCCGAAGCAGACATCTCCTTTTCCAGAATAATTTAGAAAAGATTGGACCTATCGTTTGAAATTTTTTGGTTGTATCAATTCCTCTTCTCCCCTTTGAAGCTAATTGTAAAAATTTAGTCTCGATGTAACTACTTTCATTTTCCTCTTAGAATTCCACACTGTAAAAATTGAGTTAGCTTCAAGGAGTATGCAAGTTTGGCAGTCATTGACATCATCCACAAACTTTTGTTTGCGTGGATGTGGGAATGTCTCTCCTAATGTTTTATATATTCATATGAGCCTAAAGTTTTCGTTCTTTGACATCTAGAAGGTCGATTACTTCCTTATAATGCCTTTACATCAATGGAATATTCAATAACATACTCTCATATTCAGACCCTTTTTGGTAAATGAGTTGGAACCACAATACCTTCTTCATGACCGAAGGAAGGTTTACCAGGTATGCCTCTTTGATTTGTATCATTTTATGCTATTTCTTTTACATCTGTTAAATACGGCAGTTTTTATGTGGTGCTTTGTCTTAAGTTATTTAGTATGTTGTTGGTCATATAATCCGTTAATCTTTCTATTTGACTTTCACAGAGTTACTGATTTTACATGCTTAACCTTTACTGATTTAAGGAGCGTGAATGTTTCTTCTTCAATAAAAATTATTCATTAAGATGGGAGAAAATGCAGAGGAAAGGAAGTATCAGGAATATCCTCTCCCCTAAAGCCAACTGAAAAGGTGGTTTTATAGAAGTCCCCATTGCAAAACACTTTAAATGATTGAAGTGCCTAAAATCTTAATTCACTATTTTATGGAAGAAAGAAAAACTACTGTTAACTATTGAAGGATTCTCCTTAAGTTAGGAGATATTTGTGTAATTCATGAGTTAGTATACAAGTTCAGAATAAATGGTATCTATTCTGTTACTCAGCTTGAGCTTGAGGGGAGTGTCAAAAGATATTTGTATAATCCCTTTAAATAAGCGAAGTAGTTGAAATTAAGATTTATTTAGCCTGTCTCCCTTTTATAAAAGGGACATGCAATTCTCGAAAAATTAGTAAGAAAACAGCAAGCTAATTTAGACTTTGCAGCATGGTATCAAAGCATAGCTGTCATCAAAATCCTCATTCAACAAGACCCTCAGACTTTGCTGCTCAAAACAAAAGAAGTTGCTAAAAATTTTCAGCCTCTACAAGGAGATTGCAAAATGGAAAAAAAAAAGGGGGGGGAAAAAGAAAACCGCAAATTGATTTTTTTTTTTCCCAGCAATCTGGAAATAATATTAAGTCCAAATATCCCCGACTTCCTCTGCTGCTCAAATCCCCAGCAATCTGCAAATGTGTTCCACCAATGGACCAAAATTATTCTCTCTGTTCCACAAGCCGCAAACCCACCAAGAAACATATCCATTCTAGCCTCCATGATCAGAGTCTTACTTCTTTCATCGTGAGCCTTCATAGCTGA ATGGAGGTGGAACTGGAAGAGAATGATGTTCAGGAAAAGAAGATTAGGATTGGAGTTTGCGTGATGGTAAAGAAGGTGAAATGCGACGCCAAGCTTAATCATGTGTCCTCGTCGCCAATGAGACAGATATTAGATAGATTGGAGGCCTTTGGTGAATTTGAGATAATAGTATTTGGAGACAAGGTCATTCTAGAAGATCCAATAGAGAGATGGCCAGATTGTGATTGCTTGATTGCCTTTTACTCCAGTGGCTATCCATTGGAGAAGGTTGAAGAGTATGCTGCTCTTCGCAAACCCTTTTTGGTAAATGAGTTGGAACCACAATACCTTCTTCATGACCGAAGGAAGGTTTACCAGCAATCTGGAAATAATATTAAGTCCAAATATCCCCGACTTCCTCTGCTGCTCAAATCCCCAGCAATCTGCAAATGTGTTCCACCAATGGACCAAAATTATTCTCTCTGTTCCACAAGCCGCAAACCCACCAAGAAACATATCCATTCTAGCCTCCATGATCAGAGTCTTACTTCTTTCATCGTGAGCCTTCATAGCTGA ATGGAGGTGGAACTGGAAGAGAATGATGTTCAGGAAAAGAAGATTAGGATTGGAGTTTGCGTGATGGTAAAGAAGGTGAAATGCGACGCCAAGCTTAATCATGTGTCCTCGTCGCCAATGAGACAGATATTAGATAGATTGGAGGCCTTTGGTGAATTTGAGATAATAGTATTTGGAGACAAGGTCATTCTAGAAGATCCAATAGAGAGATGGCCAGATTGTGATTGCTTGATTGCCTTTTACTCCAGTGGCTATCCATTGGAGAAGGTTGAAGAGTATGCTGCTCTTCGCAAACCCTTTTTGGTAAATGAGTTGGAACCACAATACCTTCTTCATGACCGAAGGAAGGTTTACCAGCAATCTGGAAATAATATTAAGTCCAAATATCCCCGACTTCCTCTGCTGCTCAAATCCCCAGCAATCTGCAAATGTGTTCCACCAATGGACCAAAATTATTCTCTCTGTTCCACAAGCCGCAAACCCACCAAGAAACATATCCATTCTAGCCTCCATGATCAGAGTCTTACTTCTTTCATCGTGAGCCTTCATAGCTGA MEVELEENDVQEKKIRIGVCVMVKKVKCDAKLNHVSSSPMRQILDRLEAFGEFEIIVFGDKVILEDPIERWPDCDCLIAFYSSGYPLEKVEEYAALRKPFLVNELEPQYLLHDRRKVYQQSGNNIKSKYPRLPLLLKSPAICKCVPPMDQNYSLCSTSRKPTKKHIHSSLHDQSLTSFIVSLHS Homology
BLAST of Carg04401 vs. NCBI nr
Match: KAG7033152.1 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 375.2 bits (962), Expect = 3.3e-100 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Carg04401 vs. NCBI nr
Match: XP_022953054.1 (inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like isoform X1 [Cucurbita moschata] >XP_022990036.1 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like isoform X1 [Cucurbita maxima] >XP_023525946.1 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245.0 bits (624), Expect = 5.2e-61 Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg04401 vs. NCBI nr
Match: XP_038890407.1 (inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like isoform X1 [Benincasa hispida] >XP_038890408.1 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 234.6 bits (597), Expect = 7.0e-58 Identity = 112/119 (94.12%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Carg04401 vs. NCBI nr
Match: XP_022134518.1 (inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2-like isoform X1 [Momordica charantia]) HSP 1 Score: 233.4 bits (594), Expect = 1.6e-57 Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of Carg04401 vs. NCBI nr
Match: XP_008459290.1 (PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 232.3 bits (591), Expect = 3.5e-57 Identity = 110/119 (92.44%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy Swiss-Prot
Match: Q84WW3 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 4.0e-40 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy Swiss-Prot
Match: F4J8C6 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP1 OS=Arabidopsis thaliana OX=3702 GN=VIP1 PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39 Identity = 84/119 (70.59%), Postives = 96/119 (80.67%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy Swiss-Prot
Match: O43314 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Homo sapiens OX=9606 GN=PPIP5K2 PE=1 SV=3) HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy Swiss-Prot
Match: Q5REW0 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Pongo abelii OX=9601 GN=PPIP5K2 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25 Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy Swiss-Prot
Match: Q6ZQB6 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 OS=Mus musculus OX=10090 GN=Ppip5k2 PE=1 SV=3) HSP 1 Score: 116.3 bits (290), Expect = 3.6e-25 Identity = 59/150 (39.33%), Postives = 88/150 (58.67%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy TrEMBL
Match: A0A6J1JLU3 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Cucurbita maxima OX=3661 GN=LOC111487048 PE=3 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61 Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy TrEMBL
Match: A0A6J1GNJ6 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Cucurbita moschata OX=3662 GN=LOC111455571 PE=3 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 2.5e-61 Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy TrEMBL
Match: A0A6J1C275 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Momordica charantia OX=3673 GN=LOC111006742 PE=3 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 7.5e-58 Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy TrEMBL
Match: A0A1S3C9X6 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Cucumis melo OX=3656 GN=LOC103498465 PE=3 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.7e-57 Identity = 110/119 (92.44%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of Carg04401 vs. ExPASy TrEMBL
Match: A0A6J1JHH5 (Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase OS=Cucurbita maxima OX=3661 GN=LOC111487048 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 4.3e-53 Identity = 110/120 (91.67%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Carg04401 vs. TAIR 10
Match: AT3G01310.1 (Phosphoglycerate mutase-like family protein ) HSP 1 Score: 172.6 bits (436), Expect = 3.0e-43 Identity = 87/119 (73.11%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Carg04401 vs. TAIR 10
Match: AT5G15070.1 (Phosphoglycerate mutase-like family protein ) HSP 1 Score: 166.0 bits (419), Expect = 2.8e-41 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Carg04401 vs. TAIR 10
Match: AT5G15070.2 (Phosphoglycerate mutase-like family protein ) HSP 1 Score: 166.0 bits (419), Expect = 2.8e-41 Identity = 82/115 (71.30%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Carg04401 vs. TAIR 10
Match: AT3G01310.2 (Phosphoglycerate mutase-like family protein ) HSP 1 Score: 162.9 bits (411), Expect = 2.4e-40 Identity = 84/119 (70.59%), Postives = 96/119 (80.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|