Homology
BLAST of Carg04154 vs. NCBI nr
Match:
KAG7011869.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1416.0 bits (3664), Expect = 0.0e+00
Identity = 682/682 (100.00%), Postives = 682/682 (100.00%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. NCBI nr
Match:
KAG6572234.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1395.2 bits (3610), Expect = 0.0e+00
Identity = 673/682 (98.68%), Postives = 677/682 (99.27%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SLTLSHSLQPF P NLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNSVSWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATL+GA SAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. NCBI nr
Match:
XP_022953072.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata] >XP_022953073.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1386.7 bits (3588), Expect = 0.0e+00
Identity = 668/682 (97.95%), Postives = 675/682 (98.97%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SLTLSHSLQPF P NLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNSVSWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATL+GA SAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHG+TRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGSTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. NCBI nr
Match:
XP_022969015.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 663/682 (97.21%), Postives = 673/682 (98.68%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SLTLSHSL PFLPCNLHFPLQNCETEREAKQFHALS+KTGSLN PSIS RLLALYAN
Sbjct: 1 MMPSLTLSHSLLPFLPCNLHFPLQNCETEREAKQFHALSVKTGSLNDPSISLRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNS+SWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSISWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATL+GALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRVFQSIPK+KLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKRKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFA+EARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAEEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWE RQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWENFRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. NCBI nr
Match:
XP_023554422.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1373.2 bits (3553), Expect = 0.0e+00
Identity = 660/682 (96.77%), Postives = 671/682 (98.39%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MMASL LSHSLQPFLPCNLHFPLQ+CETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLI+KIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNSVSWNAMI+GYMKAGKFN ARELFD MPERNHVSWNSMITGYELNKQF QALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNMARELFDRMPERNHVSWNSMITGYELNKQFIQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATL+GALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRV QSIP KKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVCQSIPNKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGY+EEA+ TIERMP+KAN+VI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYIEEAKDTIERMPVKANHVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKL EMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLREMKEKLNVAGHVPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNI HGSPIRIIKNLRICNDCHAVTK ISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNINHGSPIRIIKNLRICNDCHAVTKLISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 562.8 bits (1449), Expect = 5.4e-159
Identity = 291/704 (41.34%), Postives = 419/704 (59.52%), Query Frame = 0
Query: 23 LQNCETEREAKQFHALSLKTGSLN-HPSISPRLLALYANPRINNLEYVQSLFDWIRKPTL 82
L NC+T + + HA +K G N + ++S + +P L Y S+F I++P L
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 83 VSWNMLIKCYIENQRSNDAIALF-CKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGL 142
+ WN + + + + A+ L+ C + +P+S+T P VLK CA+ A +EG+QIHG
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
+LK+G +D +V +SL++MY + G +E KVFD+ +DVVS+ +LI GYA G IE A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 203 LELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVF-DRMPT------------------- 262
+LFDE+P KD SW ++ G +++G K A ++F D M T
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 263 ------RNSVSW-------------NAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
R W NA+ID Y K G+ TA LF+ +P ++ +SWN++I
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 323 TGYELNKQFTQALKLFEVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFK 382
GY + +AL LF+ ML +PN T++ L A + L ++ GRW+H YI K R K
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-RLK 399
Query: 383 ---TDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELF 442
L TSLI+MY+KCG I+ A +VF SI K L W A+I G MHG + + +LF
Sbjct: 400 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 459
Query: 443 DEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCR 502
M + G++P ITF+G+L+ACSH+G R F+TMT D+ + P +EHYGC+ID L
Sbjct: 460 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 519
Query: 503 AGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVIL 562
+G +EA I M ++ + VIW SLL + HGN +GE A +L+ + P+ G YV+L
Sbjct: 520 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 579
Query: 563 SNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKL 622
SN+YA+ G W +V + R ++ KG++K PGCSSIE +HEFI+GD+ HP+ EIY L
Sbjct: 580 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 639
Query: 623 HEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKN 682
EM+ L AG +PDT++VL +EE+ KE L HSE+LAIAFGL++ K G+ + I+KN
Sbjct: 640 EEMEVLLEKAGFVPDTSEVLQEMEEE-WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 699
BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 562.0 bits (1447), Expect = 9.3e-159
Identity = 273/702 (38.89%), Postives = 425/702 (60.54%), Query Frame = 0
Query: 23 LQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIRKPTLV 82
++ C + R+ KQ H ++TG+ + P + +L A+ A +LEY + +FD I KP
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 83 SWNMLIKCYIENQRSNDAIALFCKLLCEFM--PDSFTLPCVLKGCARLSALQEGKQIHGL 142
+WN LI+ Y +I F ++ E P+ +T P ++K A +S+L G+ +HG+
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
+K +G D FV +SL++ Y CG+++ KVF +++KDVVSWNS+I+G+ + G + A
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 203 LELFDEMPEKD------------------------------------NFSWTI---LVDG 262
LELF +M +D N + T+ ++D
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276
Query: 263 LSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
+K G ++ A+ +FD M +++V+W M+DGY + + ARE+ + MP+++ V+WN++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 323 TGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRF 382
+ YE N + +AL +F E+ L +++ N TLV LSA + + +L GRW+HSYI K+
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 383 KTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDE 442
+ + + ++LI MYSKCG ++ + VF S+ K+ + W+A+I GL MHG + +++F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 443 MCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAG 502
M +KP+ +TF V ACSH G EA F M ++GI P +HY C++D L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 503 YLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSN 562
YLE+A IE MPI + +W +LL + H N + E A L++L P G +V+LSN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 563 MYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHE 622
+YA G WE V ++R+ M+ G++K+PGCSSIE G IHEF+ GD +HP +E++Y KLHE
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Query: 623 MKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLR 682
+ EKL G+ P+ +QVL +EE+ KE L HSE+LAI +GL++ + IR+IKNLR
Sbjct: 637 VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLR 696
BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 551.6 bits (1420), Expect = 1.3e-155
Identity = 289/673 (42.94%), Postives = 403/673 (59.88%), Query Frame = 0
Query: 16 PCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRIN--NLEYVQSLF 75
P +L + NC T R+ Q HA+ +K+G + + +L A ++ +L+Y +F
Sbjct: 23 PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 76 DWIRKPTLVSWNMLIKCYIENQRSND--AIALFCKLLC-EFM-PDSFTLPCVLKGCARLS 135
+ + + SWN +I+ + E+ AI LF +++ EF+ P+ FT P VLK CA+
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 136 ALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLID 195
+QEGKQIHGL LK G G D+FV+S+LV MY CG M+D V+ + ++I
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG----------FMKDARVLFYKNII- 202
Query: 196 GYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAM 255
EKD ++ D + G++ V WN M
Sbjct: 203 -------------------EKD---MVVMTDRRKRDGEI---------------VLWNVM 262
Query: 256 IDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVMLTEDISPNH 315
IDGYM+ G AR LFD M +R+ VSWN+MI+GY LN F A+++F M DI PN+
Sbjct: 263 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 322
Query: 316 ATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQS 375
TLV L A S L SL G W+H Y + + D VLG++LI+MYSKCG I+ A+ VF+
Sbjct: 323 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 382
Query: 376 IPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEA 435
+P++ + W+A+I G +HG ++ F +M + G++P + +I +L ACSH G +E
Sbjct: 383 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 442
Query: 436 RRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIWMSLLSGSR 495
RRYF M G+EP IEHYGC++D L R+G L+EA I MPIK + VIW +LL R
Sbjct: 443 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 502
Query: 496 KHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKKGIRKDPGC 555
GN MG+ A+ LMD+ P +G YV LSNMYA+ G W +V ++R MK+K IRKDPGC
Sbjct: 503 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 562
Query: 556 SSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEA 615
S I+ G +HEF+V D SHP+ +EI L E+ +KL +AG+ P TTQVLL LEE+ +KE
Sbjct: 563 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKEN 622
Query: 616 ELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREIIIRDGSRFH 675
L HSE++A AFGL++ G PIRI+KNLRIC DCH+ K IS +Y R+I +RD RFH
Sbjct: 623 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 646
Query: 676 HFKSGSCSCKDFW 683
HF+ GSCSC D+W
Sbjct: 683 HFQDGSCSCMDYW 646
BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 525.8 bits (1353), Expect = 7.4e-148
Identity = 264/681 (38.77%), Postives = 397/681 (58.30%), Query Frame = 0
Query: 4 SLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRI 63
S +L H+L + C LQ C + E KQ HA LKTG + + L+ +
Sbjct: 7 SFSLEHNLYETMSC-----LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 66
Query: 64 NN-LEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMP-DSFTLPCV 123
++ L Y Q +FD +P WN++I+ + + ++ L+ ++LC P +++T P +
Sbjct: 67 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 126
Query: 124 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 183
LK C+ LSA +E QIH I K+G D + ++SL+N Y+ G ++ +FDR+ + D
Sbjct: 127 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 186
Query: 184 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 243
VSWNS+I GY + G++++AL LF +M EK
Sbjct: 187 VSWNSVIKGYVKAGKMDIALTLFRKMAEK------------------------------- 246
Query: 244 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 303
N++SW MI GY++A ++NK +AL+LF M
Sbjct: 247 NAISWTTMISGYVQA----------------------------DMNK---EALQLFHEMQ 306
Query: 304 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 363
D+ P++ +L ALSA + L +L G+W+HSY+ K R + D VLG LI+MY+KCG ++
Sbjct: 307 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 366
Query: 364 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 423
+AL VF++I KK + WTA+I G HG + + F EM + G+KP+ ITF VL ACS
Sbjct: 367 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 426
Query: 424 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 483
+ G +E + F +M D+ ++P+IEHYGC++D L RAG L+EA+ I+ MP+K N VIW
Sbjct: 427 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 486
Query: 484 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 543
+LL R H N +GE L+ + P G YV +N++A W+K + R +MK++
Sbjct: 487 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 546
Query: 544 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 603
G+ K PGCS+I +G+ HEF+ GDRSHP+ E+I K M+ KL G++P+ ++LL L
Sbjct: 547 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 606
Query: 604 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 663
+D+E+EA + HSE+LAI +GL+ K G+ IRI+KNLR+C DCH VTK IS IY R+I+
Sbjct: 607 VDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIV 620
Query: 664 IRDGSRFHHFKSGSCSCKDFW 683
+RD +RFHHF+ G CSC D+W
Sbjct: 667 MRDRTRFHHFRDGKCSCGDYW 620
BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 506.9 bits (1304), Expect = 3.5e-142
Identity = 260/707 (36.78%), Postives = 397/707 (56.15%), Query Frame = 0
Query: 21 FPLQNCETER---EAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIR 80
F L C R Q H L +K G + L+ YA L+ + +FD +
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMS 198
Query: 81 KPTLVSWNMLIKCYIENQRSNDAIALFCKLLC--EFMPDSFTLPCVLKGCARLSALQEGK 140
+ +VSW +I Y + DA+ LF +++ E P+S T+ CV+ CA+L L+ G+
Sbjct: 199 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 258
Query: 141 QIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCG 200
+++ I GI ++ ++S+LV+MY KC I++ +++FD ++ N++ Y R G
Sbjct: 259 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 318
Query: 201 EIELALELFDEMPEKD-------------------NFSW--------------------T 260
AL +F+ M + N W
Sbjct: 319 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 378
Query: 261 ILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVS 320
L+D K + A +FDRM + V+WN+++ GY++ G+ + A E F+ MPE+N VS
Sbjct: 379 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 438
Query: 321 WNSMITGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYI 380
WN++I+G F +A+++F + E ++ + T++ SA L +L +W++ YI
Sbjct: 439 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 498
Query: 381 VKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTL 440
KN + D LGT+L++M+S+CG + A+ +F S+ + + WTA I + M G E+ +
Sbjct: 499 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 558
Query: 441 ELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDA 500
ELFD+M GLKP + F+G L ACSH G ++ + F +M G+ P HYGC++D
Sbjct: 559 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 618
Query: 501 LCRAGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCY 560
L RAG LEEA IE MP++ N VIW SLL+ R GN M YAA + LAP+ TG Y
Sbjct: 619 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 678
Query: 561 VILSNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIY 620
V+LSN+YA+ G W + +VR MK+KG+RK PG SSI+ +G HEF GD SHP+ I
Sbjct: 679 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 738
Query: 621 VKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRI 680
L E+ ++ + GH+PD + VL+ ++E EK L HSE+LA+A+GL++ G+ IRI
Sbjct: 739 AMLDEVSQRASHLGHVPDLSNVLMDVDE-KEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 798
Query: 681 IKNLRICNDCHAVTKFISDIYNREIIIRDGSRFHHFKSGSCSCKDFW 683
+KNLR+C+DCH+ KF S +YNREII+RD +RFH+ + G CSC DFW
Sbjct: 799 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
BLAST of Carg04154 vs. ExPASy TrEMBL
Match:
A0A6J1GM70 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455587 PE=3 SV=1)
HSP 1 Score: 1386.7 bits (3588), Expect = 0.0e+00
Identity = 668/682 (97.95%), Postives = 675/682 (98.97%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SLTLSHSLQPF P NLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1 MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNSVSWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATL+GA SAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHG+TRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGSTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. ExPASy TrEMBL
Match:
A0A6J1HYS6 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468139 PE=3 SV=1)
HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 663/682 (97.21%), Postives = 673/682 (98.68%), Query Frame = 0
Query: 1 MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
MM SLTLSHSL PFLPCNLHFPLQNCETEREAKQFHALS+KTGSLN PSIS RLLALYAN
Sbjct: 1 MMPSLTLSHSLLPFLPCNLHFPLQNCETEREAKQFHALSVKTGSLNDPSISLRLLALYAN 60
Query: 61 PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61 PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180
Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
RNS+SWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSISWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
LTEDISPNHATL+GALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
KDALRVFQSIPK+KLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKRKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
SHAGFA+EARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAEEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480
Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWE RQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWENFRQVREMMKK 540
Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600
Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682
BLAST of Carg04154 vs. ExPASy TrEMBL
Match:
A0A6J1C6D9 (pentatricopeptide repeat-containing protein At5g48910-like OS=Momordica charantia OX=3673 GN=LOC111007802 PE=3 SV=1)
HSP 1 Score: 1259.6 bits (3258), Expect = 0.0e+00
Identity = 595/681 (87.37%), Postives = 639/681 (93.83%), Query Frame = 0
Query: 2 MASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
M SL LSHSL PFLP NLHFPLQNCETERE KQ HALSLKTGS NHPSIS RLLALY +P
Sbjct: 1 MLSLALSHSLLPFLPRNLHFPLQNCETEREVKQLHALSLKTGSFNHPSISSRLLALYTDP 60
Query: 62 RINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
RINNLEY +SLFDWIR+PTLVSWN+L+KCY+ENQRSNDAI+LFC+LL EF+PDSFTLPCV
Sbjct: 61 RINNLEYARSLFDWIREPTLVSWNLLVKCYVENQRSNDAISLFCELLSEFIPDSFTLPCV 120
Query: 122 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 181
LKGCARLSAL EGKQIHGLILKIG G+DKFVLSSLV+MYSKCGEIE+CRKVFDRMEDKDV
Sbjct: 121 LKGCARLSALDEGKQIHGLILKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180
Query: 182 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 241
VSWNSLIDGYARCG+IELALE+FDEMPE+D+FSWTILVDGLSKSGKL+ ARDVFDRMPTR
Sbjct: 181 VSWNSLIDGYARCGQIELALEVFDEMPERDSFSWTILVDGLSKSGKLETARDVFDRMPTR 240
Query: 242 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 301
NSVSWNAMI+GYMKAG FNTARELFD MPERN V+WNSMITGYELN+QF+QALKLFEVML
Sbjct: 241 NSVSWNAMINGYMKAGDFNTARELFDQMPERNLVTWNSMITGYELNRQFSQALKLFEVML 300
Query: 302 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 361
E+ISPNHAT++GALSAASGL S G GRWVHS+IVKN F+TDGVLGTSLIEMYSKCGSI
Sbjct: 301 REEISPNHATILGALSAASGLVSFGKGRWVHSFIVKNGFETDGVLGTSLIEMYSKCGSIA 360
Query: 362 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 421
ALRVF+SIPKKKLGHWTAIIVGLGMHGLV QTLELFDEMCR GLKPHAITFIG+LNACS
Sbjct: 361 SALRVFKSIPKKKLGHWTAIIVGLGMHGLVGQTLELFDEMCRIGLKPHAITFIGLLNACS 420
Query: 422 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 481
HAGFA +A YFK M DD+GIEPSIEHYGCLID LCRAG LEEA++TIERMPIK N VIW
Sbjct: 421 HAGFADDAYHYFKMMMDDYGIEPSIEHYGCLIDVLCRAGCLEEAKNTIERMPIKPNKVIW 480
Query: 482 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 541
MSLLSGSRKHGN RMGEYAAHHL+DLAPDTTGCY+ILSNMYA GLWEKVRQVREMMKKK
Sbjct: 481 MSLLSGSRKHGNIRMGEYAAHHLIDLAPDTTGCYIILSNMYAGAGLWEKVRQVREMMKKK 540
Query: 542 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 601
GIRKDPGCSSIEHQGS+HEFIVGDRSHPQTEEIY+KL EMKEKLNVAGH+PDTTQVLLCL
Sbjct: 541 GIRKDPGCSSIEHQGSVHEFIVGDRSHPQTEEIYIKLSEMKEKLNVAGHVPDTTQVLLCL 600
Query: 602 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 661
E+DNEKE+ELETHSERLAIAFGL+NIKHG+P+RIIKNLRICNDCH V+K +S IYNREII
Sbjct: 601 EDDNEKESELETHSERLAIAFGLINIKHGNPVRIIKNLRICNDCHTVSKLLSHIYNREII 660
Query: 662 IRDGSRFHHFKSGSCSCKDFW 683
IRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IRDGSRFHHFKSGSCSCKDFW 681
BLAST of Carg04154 vs. ExPASy TrEMBL
Match:
A0A5D3D6Y7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00490 PE=3 SV=1)
HSP 1 Score: 1258.8 bits (3256), Expect = 0.0e+00
Identity = 599/681 (87.96%), Postives = 641/681 (94.13%), Query Frame = 0
Query: 2 MASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
M SLTLSHSLQPFLP NLHFPLQNC TEREA Q HALS+KT SLNHPS+S LLALYA+P
Sbjct: 1 MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60
Query: 62 RINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
INNL+Y QSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61 TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120
Query: 122 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 181
LKGCARL ALQEGKQIHGL+LKIG G+DKFVLSSLV+MYSKCGEIE+CRKVFDRMEDKDV
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180
Query: 182 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 241
VSWNSLIDGYARCGEIELALE+F+EMPEKD+FSWTIL+DGLSKSGKL+AAR VFDRMP R
Sbjct: 181 VSWNSLIDGYARCGEIELALEVFEEMPEKDSFSWTILIDGLSKSGKLEAARYVFDRMPIR 240
Query: 242 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 301
NSVSWNAMI+GYMKAG NTA+ELFD MPER+ V+WNSMITGYE NKQFT+ALKLFEVML
Sbjct: 241 NSVSWNAMINGYMKAGDSNTAQELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVML 300
Query: 302 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 361
EDISPN+ T++GA+SAASGL SLG GRWVHSYIVKN FKTDGVLGT LIEMYSKCGS+K
Sbjct: 301 REDISPNYTTILGAVSAASGLVSLGTGRWVHSYIVKNGFKTDGVLGTLLIEMYSKCGSVK 360
Query: 362 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 421
ALRVF+ I KKKLGHWT+IIVGLGMHGLVEQTLELFDEMCRTGL+PHAITFIGVLNACS
Sbjct: 361 SALRVFRFISKKKLGHWTSIIVGLGMHGLVEQTLELFDEMCRTGLQPHAITFIGVLNACS 420
Query: 422 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 481
HAGFA++A RYFK MT D+GI+P+IEHYGCLID LCRAGYLEEA+ TIERMPIKAN VIW
Sbjct: 421 HAGFAEDAHRYFKMMTSDYGIKPTIEHYGCLIDVLCRAGYLEEAKDTIERMPIKANKVIW 480
Query: 482 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 541
SLLSGSRKHGN RMGEYAA HL+DLAPDTTGCYVILSNMYAATGLWEKVRQVREMMK+K
Sbjct: 481 TSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKEK 540
Query: 542 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 601
GIRKDPGCSSIEHQGSIHEFIVGD+SHPQTEEIY+KL EMK+KLNVAGHIPDT+QVLLCL
Sbjct: 541 GIRKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLREMKKKLNVAGHIPDTSQVLLCL 600
Query: 602 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 661
EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK +S IYNREII
Sbjct: 601 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREII 660
Query: 662 IRDGSRFHHFKSGSCSCKDFW 683
IRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IRDGSRFHHFKSGSCSCKDFW 681
BLAST of Carg04154 vs. ExPASy TrEMBL
Match:
A0A1S3CG66 (pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=3656 GN=LOC103500522 PE=3 SV=1)
HSP 1 Score: 1258.4 bits (3255), Expect = 0.0e+00
Identity = 599/681 (87.96%), Postives = 641/681 (94.13%), Query Frame = 0
Query: 2 MASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
M SLTLSHSLQPFLP NLHFPLQNC TEREA Q HALS+KT SLNHPS+S LLALYA+P
Sbjct: 1 MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60
Query: 62 RINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
INNL+Y QSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61 TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120
Query: 122 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 181
LKGCARL ALQEGKQIHGL+LKIG G+DKFVLSSLV+MYSKCGEIE+CRKVFDRMEDKDV
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180
Query: 182 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 241
VSWNSLIDGYARCGEIELALE+F+EMPEKD+FSWTIL+DGLSKSGKL+AAR VFDRMP R
Sbjct: 181 VSWNSLIDGYARCGEIELALEVFEEMPEKDSFSWTILIDGLSKSGKLEAARYVFDRMPIR 240
Query: 242 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 301
NSVSWNAMI+GYMKAG NTA+ELFD MPER+ V+WNSMITGYE NKQFT+ALKLFEVML
Sbjct: 241 NSVSWNAMINGYMKAGYSNTAQELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVML 300
Query: 302 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 361
EDISPN+ T++GA+SAASGL SLG GRWVHSYIVKN FKTDGVLGT LIEMYSKCGS+K
Sbjct: 301 REDISPNYTTILGAVSAASGLVSLGTGRWVHSYIVKNGFKTDGVLGTLLIEMYSKCGSVK 360
Query: 362 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 421
ALRVF+ I KKKLGHWT+IIVGLGMHGLVEQTLELFDEMCRTGL+PHAITFIGVLNACS
Sbjct: 361 SALRVFRFISKKKLGHWTSIIVGLGMHGLVEQTLELFDEMCRTGLQPHAITFIGVLNACS 420
Query: 422 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 481
HAGFA++A RYFK MT D+GI+P+IEHYGCLID LCRAGYLEEA+ TIERMPIKAN VIW
Sbjct: 421 HAGFAEDAHRYFKMMTSDYGIKPTIEHYGCLIDVLCRAGYLEEAKDTIERMPIKANKVIW 480
Query: 482 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 541
SLLSGSRKHGN RMGEYAA HL+DLAPDTTGCYVILSNMYAATGLWEKVRQVREMMK+K
Sbjct: 481 TSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKEK 540
Query: 542 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 601
GIRKDPGCSSIEHQGSIHEFIVGD+SHPQTEEIY+KL EMK+KLNVAGHIPDT+QVLLCL
Sbjct: 541 GIRKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLREMKKKLNVAGHIPDTSQVLLCL 600
Query: 602 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 661
EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK +S IYNREII
Sbjct: 601 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREII 660
Query: 662 IRDGSRFHHFKSGSCSCKDFW 683
IRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IRDGSRFHHFKSGSCSCKDFW 681
BLAST of Carg04154 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 562.8 bits (1449), Expect = 3.9e-160
Identity = 291/704 (41.34%), Postives = 419/704 (59.52%), Query Frame = 0
Query: 23 LQNCETEREAKQFHALSLKTGSLN-HPSISPRLLALYANPRINNLEYVQSLFDWIRKPTL 82
L NC+T + + HA +K G N + ++S + +P L Y S+F I++P L
Sbjct: 40 LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99
Query: 83 VSWNMLIKCYIENQRSNDAIALF-CKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGL 142
+ WN + + + + A+ L+ C + +P+S+T P VLK CA+ A +EG+QIHG
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159
Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
+LK+G +D +V +SL++MY + G +E KVFD+ +DVVS+ +LI GYA G IE A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 203 LELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVF-DRMPT------------------- 262
+LFDE+P KD SW ++ G +++G K A ++F D M T
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 263 ------RNSVSW-------------NAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
R W NA+ID Y K G+ TA LF+ +P ++ +SWN++I
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 323 TGYELNKQFTQALKLFEVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFK 382
GY + +AL LF+ ML +PN T++ L A + L ++ GRW+H YI K R K
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-RLK 399
Query: 383 ---TDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELF 442
L TSLI+MY+KCG I+ A +VF SI K L W A+I G MHG + + +LF
Sbjct: 400 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 459
Query: 443 DEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCR 502
M + G++P ITF+G+L+ACSH+G R F+TMT D+ + P +EHYGC+ID L
Sbjct: 460 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 519
Query: 503 AGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVIL 562
+G +EA I M ++ + VIW SLL + HGN +GE A +L+ + P+ G YV+L
Sbjct: 520 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 579
Query: 563 SNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKL 622
SN+YA+ G W +V + R ++ KG++K PGCSSIE +HEFI+GD+ HP+ EIY L
Sbjct: 580 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 639
Query: 623 HEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKN 682
EM+ L AG +PDT++VL +EE+ KE L HSE+LAIAFGL++ K G+ + I+KN
Sbjct: 640 EEMEVLLEKAGFVPDTSEVLQEMEEE-WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 699
BLAST of Carg04154 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 562.0 bits (1447), Expect = 6.6e-160
Identity = 273/702 (38.89%), Postives = 425/702 (60.54%), Query Frame = 0
Query: 23 LQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIRKPTLV 82
++ C + R+ KQ H ++TG+ + P + +L A+ A +LEY + +FD I KP
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 83 SWNMLIKCYIENQRSNDAIALFCKLLCEFM--PDSFTLPCVLKGCARLSALQEGKQIHGL 142
+WN LI+ Y +I F ++ E P+ +T P ++K A +S+L G+ +HG+
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156
Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
+K +G D FV +SL++ Y CG+++ KVF +++KDVVSWNS+I+G+ + G + A
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216
Query: 203 LELFDEMPEKD------------------------------------NFSWTI---LVDG 262
LELF +M +D N + T+ ++D
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276
Query: 263 LSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
+K G ++ A+ +FD M +++V+W M+DGY + + ARE+ + MP+++ V+WN++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 323 TGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRF 382
+ YE N + +AL +F E+ L +++ N TLV LSA + + +L GRW+HSYI K+
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 383 KTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDE 442
+ + + ++LI MYSKCG ++ + VF S+ K+ + W+A+I GL MHG + +++F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 443 MCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAG 502
M +KP+ +TF V ACSH G EA F M ++GI P +HY C++D L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 503 YLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSN 562
YLE+A IE MPI + +W +LL + H N + E A L++L P G +V+LSN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 563 MYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHE 622
+YA G WE V ++R+ M+ G++K+PGCSSIE G IHEF+ GD +HP +E++Y KLHE
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Query: 623 MKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLR 682
+ EKL G+ P+ +QVL +EE+ KE L HSE+LAI +GL++ + IR+IKNLR
Sbjct: 637 VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLR 696
BLAST of Carg04154 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 551.6 bits (1420), Expect = 8.9e-157
Identity = 289/673 (42.94%), Postives = 403/673 (59.88%), Query Frame = 0
Query: 16 PCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRIN--NLEYVQSLF 75
P +L + NC T R+ Q HA+ +K+G + + +L A ++ +L+Y +F
Sbjct: 23 PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 76 DWIRKPTLVSWNMLIKCYIENQRSND--AIALFCKLLC-EFM-PDSFTLPCVLKGCARLS 135
+ + + SWN +I+ + E+ AI LF +++ EF+ P+ FT P VLK CA+
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 136 ALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLID 195
+QEGKQIHGL LK G G D+FV+S+LV MY CG M+D V+ + ++I
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG----------FMKDARVLFYKNII- 202
Query: 196 GYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAM 255
EKD ++ D + G++ V WN M
Sbjct: 203 -------------------EKD---MVVMTDRRKRDGEI---------------VLWNVM 262
Query: 256 IDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVMLTEDISPNH 315
IDGYM+ G AR LFD M +R+ VSWN+MI+GY LN F A+++F M DI PN+
Sbjct: 263 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 322
Query: 316 ATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQS 375
TLV L A S L SL G W+H Y + + D VLG++LI+MYSKCG I+ A+ VF+
Sbjct: 323 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 382
Query: 376 IPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEA 435
+P++ + W+A+I G +HG ++ F +M + G++P + +I +L ACSH G +E
Sbjct: 383 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 442
Query: 436 RRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIWMSLLSGSR 495
RRYF M G+EP IEHYGC++D L R+G L+EA I MPIK + VIW +LL R
Sbjct: 443 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 502
Query: 496 KHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKKGIRKDPGC 555
GN MG+ A+ LMD+ P +G YV LSNMYA+ G W +V ++R MK+K IRKDPGC
Sbjct: 503 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 562
Query: 556 SSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEA 615
S I+ G +HEF+V D SHP+ +EI L E+ +KL +AG+ P TTQVLL LEE+ +KE
Sbjct: 563 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKEN 622
Query: 616 ELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREIIIRDGSRFH 675
L HSE++A AFGL++ G PIRI+KNLRIC DCH+ K IS +Y R+I +RD RFH
Sbjct: 623 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 646
Query: 676 HFKSGSCSCKDFW 683
HF+ GSCSC D+W
Sbjct: 683 HFQDGSCSCMDYW 646
BLAST of Carg04154 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 525.8 bits (1353), Expect = 5.2e-149
Identity = 264/681 (38.77%), Postives = 397/681 (58.30%), Query Frame = 0
Query: 4 SLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRI 63
S +L H+L + C LQ C + E KQ HA LKTG + + L+ +
Sbjct: 7 SFSLEHNLYETMSC-----LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 66
Query: 64 NN-LEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMP-DSFTLPCV 123
++ L Y Q +FD +P WN++I+ + + ++ L+ ++LC P +++T P +
Sbjct: 67 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 126
Query: 124 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 183
LK C+ LSA +E QIH I K+G D + ++SL+N Y+ G ++ +FDR+ + D
Sbjct: 127 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 186
Query: 184 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 243
VSWNS+I GY + G++++AL LF +M EK
Sbjct: 187 VSWNSVIKGYVKAGKMDIALTLFRKMAEK------------------------------- 246
Query: 244 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 303
N++SW MI GY++A ++NK +AL+LF M
Sbjct: 247 NAISWTTMISGYVQA----------------------------DMNK---EALQLFHEMQ 306
Query: 304 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 363
D+ P++ +L ALSA + L +L G+W+HSY+ K R + D VLG LI+MY+KCG ++
Sbjct: 307 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 366
Query: 364 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 423
+AL VF++I KK + WTA+I G HG + + F EM + G+KP+ ITF VL ACS
Sbjct: 367 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 426
Query: 424 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 483
+ G +E + F +M D+ ++P+IEHYGC++D L RAG L+EA+ I+ MP+K N VIW
Sbjct: 427 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 486
Query: 484 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 543
+LL R H N +GE L+ + P G YV +N++A W+K + R +MK++
Sbjct: 487 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 546
Query: 544 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 603
G+ K PGCS+I +G+ HEF+ GDRSHP+ E+I K M+ KL G++P+ ++LL L
Sbjct: 547 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 606
Query: 604 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 663
+D+E+EA + HSE+LAI +GL+ K G+ IRI+KNLR+C DCH VTK IS IY R+I+
Sbjct: 607 VDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIV 620
Query: 664 IRDGSRFHHFKSGSCSCKDFW 683
+RD +RFHHF+ G CSC D+W
Sbjct: 667 MRDRTRFHHFRDGKCSCGDYW 620
BLAST of Carg04154 vs. TAIR 10
Match:
AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )
HSP 1 Score: 506.9 bits (1304), Expect = 2.5e-143
Identity = 260/707 (36.78%), Postives = 397/707 (56.15%), Query Frame = 0
Query: 21 FPLQNCETER---EAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIR 80
F L C R Q H L +K G + L+ YA L+ + +FD +
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMS 198
Query: 81 KPTLVSWNMLIKCYIENQRSNDAIALFCKLLC--EFMPDSFTLPCVLKGCARLSALQEGK 140
+ +VSW +I Y + DA+ LF +++ E P+S T+ CV+ CA+L L+ G+
Sbjct: 199 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 258
Query: 141 QIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCG 200
+++ I GI ++ ++S+LV+MY KC I++ +++FD ++ N++ Y R G
Sbjct: 259 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 318
Query: 201 EIELALELFDEMPEKD-------------------NFSW--------------------T 260
AL +F+ M + N W
Sbjct: 319 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 378
Query: 261 ILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVS 320
L+D K + A +FDRM + V+WN+++ GY++ G+ + A E F+ MPE+N VS
Sbjct: 379 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 438
Query: 321 WNSMITGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYI 380
WN++I+G F +A+++F + E ++ + T++ SA L +L +W++ YI
Sbjct: 439 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 498
Query: 381 VKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTL 440
KN + D LGT+L++M+S+CG + A+ +F S+ + + WTA I + M G E+ +
Sbjct: 499 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 558
Query: 441 ELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDA 500
ELFD+M GLKP + F+G L ACSH G ++ + F +M G+ P HYGC++D
Sbjct: 559 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 618
Query: 501 LCRAGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCY 560
L RAG LEEA IE MP++ N VIW SLL+ R GN M YAA + LAP+ TG Y
Sbjct: 619 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 678
Query: 561 VILSNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIY 620
V+LSN+YA+ G W + +VR MK+KG+RK PG SSI+ +G HEF GD SHP+ I
Sbjct: 679 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 738
Query: 621 VKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRI 680
L E+ ++ + GH+PD + VL+ ++E EK L HSE+LA+A+GL++ G+ IRI
Sbjct: 739 AMLDEVSQRASHLGHVPDLSNVLMDVDE-KEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 798
Query: 681 IKNLRICNDCHAVTKFISDIYNREIIIRDGSRFHHFKSGSCSCKDFW 683
+KNLR+C+DCH+ KF S +YNREII+RD +RFH+ + G CSC DFW
Sbjct: 799 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7011869.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6572234.1 | 0.0e+00 | 98.68 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022953072.1 | 0.0e+00 | 97.95 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
XP_022969015.1 | 0.0e+00 | 97.21 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucur... | [more] |
XP_023554422.1 | 0.0e+00 | 96.77 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
Q9LN01 | 5.4e-159 | 41.34 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 9.3e-159 | 38.89 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9FI80 | 1.3e-155 | 42.94 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 7.4e-148 | 38.77 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9LUJ2 | 3.5e-142 | 36.78 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GM70 | 0.0e+00 | 97.95 | pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... | [more] |
A0A6J1HYS6 | 0.0e+00 | 97.21 | pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc... | [more] |
A0A6J1C6D9 | 0.0e+00 | 87.37 | pentatricopeptide repeat-containing protein At5g48910-like OS=Momordica charanti... | [more] |
A0A5D3D6Y7 | 0.0e+00 | 87.96 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CG66 | 0.0e+00 | 87.96 | pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT1G08070.1 | 3.9e-160 | 41.34 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 6.6e-160 | 38.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G48910.1 | 8.9e-157 | 42.94 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G66520.1 | 5.2e-149 | 38.77 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22690.2 | 2.5e-143 | 36.78 | INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... | [more] |