Carg04154 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg04154
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr19: 7951881 .. 7953929 (-)
RNA-Seq ExpressionCarg04154
SyntenyCarg04154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCGTCTCTTACACTTTCACACTCCCTCCAGCCATTTCTCCCTTGCAACCTTCATTTTCCTCTTCAAAACTGCGAAACTGAACGAGAAGCGAAGCAATTCCACGCTCTCTCGCTCAAAACAGGCTCATTGAATCACCCTTCGATATCTCCTCGTCTTTTGGCTCTCTATGCAAATCCCAGAATCAACAATCTCGAATATGTTCAATCCCTCTTTGACTGGATTCGAAAACCCACTTTGGTTTCTTGGAATATGCTCATCAAGTGCTACATTGAGAATCAACGTTCAAATGATGCCATTGCGTTGTTCTGCAAATTGCTCTGTGAGTTTATGCCTGATTCTTTTACATTACCTTGTGTCCTAAAGGGTTGTGCTCGATTGAGTGCACTACAGGAAGGGAAACAGATTCATGGGTTGATATTGAAAATTGGGATTGGTATGGATAAGTTTGTTTTGAGTAGTTTGGTTAATATGTATTCTAAATGTGGTGAGATTGAGATGTGTAGGAAAGTGTTCGATCGAATGGAAGATAAGGATGTAGTATCATGGAATTCTTTGATTGATGGGTATGCTAGATGTGGTGAAATTGAACTTGCACTGGAGTTGTTTGATGAAATGCCTGAGAAGGATAATTTCTCATGGACTATTCTGGTTGATGGGCTTTCTAAAAGTGGGAAGCTCAAGGCTGCTAGAGACGTGTTCGATCGAATGCCTACTCGAAATTCTGTATCTTGGAATGCTATGATTGATGGCTACATGAAAGCTGGGAAGTTTAACACAGCACGAGAATTATTCGATTGGATGCCAGAGAGAAACCACGTTTCATGGAATTCAATGATCACTGGATATGAGCTGAACAAGCAGTTCACTCAAGCCTTGAAGCTGTTTGAGGTCATGTTGACTGAAGATATATCACCCAATCATGCCACTCTCGTTGGAGCTCTTTCTGCAGCTTCAGGATTGGCTAGTCTTGGGAATGGAAGATGGGTTCATTCCTATATAGTGAAAAATCGATTCAAAACAGACGGTGTGCTCGGCACATCGCTGATAGAAATGTACTCCAAGTGTGGCAGCATTAAGGATGCCCTCAGAGTTTTTCAGTCTATTCCCAAGAAGAAATTGGGGCATTGGACGGCTATAATTGTAGGCTTGGGAATGCATGGTTTGGTGGAGCAAACTCTTGAGCTATTTGATGAAATGTGCAGAACTGGGTTGAAGCCACATGCTATTACTTTCATTGGAGTGTTGAATGCTTGTAGTCATGCAGGATTTGCCAAAGAGGCACGTCGGTACTTCAAAACAATGACAGATGATTTTGGAATCGAGCCTTCTATTGAACACTACGGTTGCTTGATTGATGCTCTGTGTCGAGCTGGATACCTTGAAGAGGCAAGGCATACCATCGAGAGAATGCCCATCAAAGCAAACTATGTAATTTGGATGAGTCTGCTAAGTGGTTCAAGGAAACATGGTAACACAAGAATGGGGGAATATGCAGCTCATCATCTGATGGATCTAGCACCGGATACTACTGGATGTTATGTTATTCTTTCGAACATGTATGCTGCAACTGGCTTGTGGGAAAAAGTTCGTCAAGTTCGAGAAATGATGAAGAAAAAAGGAATCAGAAAGGATCCAGGATGCAGTTCCATTGAGCATCAAGGTTCAATCCATGAGTTCATTGTGGGAGATAGGTCACATCCTCAAACCGAAGAGATCTACGTCAAGCTGCATGAGATGAAAGAGAAGTTGAATGTAGCGGGACACATTCCCGACACGACGCAAGTTCTGTTATGCCTTGAAGAGGATAATGAGAAAGAAGCAGAACTTGAAACCCACAGTGAGAGGTTAGCAATAGCTTTTGGTCTTCTTAATATCAAGCATGGAAGTCCTATCCGCATTATAAAGAATCTTCGTATTTGCAATGATTGCCATGCTGTGACTAAATTTATATCTGATATTTATAACCGTGAGATCATTATCAGAGATGGTAGTCGATTCCATCACTTTAAAAGTGGGTCATGTTCTTGTAAGGATTTTTGGTGA

mRNA sequence

ATGATGGCGTCTCTTACACTTTCACACTCCCTCCAGCCATTTCTCCCTTGCAACCTTCATTTTCCTCTTCAAAACTGCGAAACTGAACGAGAAGCGAAGCAATTCCACGCTCTCTCGCTCAAAACAGGCTCATTGAATCACCCTTCGATATCTCCTCGTCTTTTGGCTCTCTATGCAAATCCCAGAATCAACAATCTCGAATATGTTCAATCCCTCTTTGACTGGATTCGAAAACCCACTTTGGTTTCTTGGAATATGCTCATCAAGTGCTACATTGAGAATCAACGTTCAAATGATGCCATTGCGTTGTTCTGCAAATTGCTCTGTGAGTTTATGCCTGATTCTTTTACATTACCTTGTGTCCTAAAGGGTTGTGCTCGATTGAGTGCACTACAGGAAGGGAAACAGATTCATGGGTTGATATTGAAAATTGGGATTGGTATGGATAAGTTTGTTTTGAGTAGTTTGGTTAATATGTATTCTAAATGTGGTGAGATTGAGATGTGTAGGAAAGTGTTCGATCGAATGGAAGATAAGGATGTAGTATCATGGAATTCTTTGATTGATGGGTATGCTAGATGTGGTGAAATTGAACTTGCACTGGAGTTGTTTGATGAAATGCCTGAGAAGGATAATTTCTCATGGACTATTCTGGTTGATGGGCTTTCTAAAAGTGGGAAGCTCAAGGCTGCTAGAGACGTGTTCGATCGAATGCCTACTCGAAATTCTGTATCTTGGAATGCTATGATTGATGGCTACATGAAAGCTGGGAAGTTTAACACAGCACGAGAATTATTCGATTGGATGCCAGAGAGAAACCACGTTTCATGGAATTCAATGATCACTGGATATGAGCTGAACAAGCAGTTCACTCAAGCCTTGAAGCTGTTTGAGGTCATGTTGACTGAAGATATATCACCCAATCATGCCACTCTCGTTGGAGCTCTTTCTGCAGCTTCAGGATTGGCTAGTCTTGGGAATGGAAGATGGGTTCATTCCTATATAGTGAAAAATCGATTCAAAACAGACGGTGTGCTCGGCACATCGCTGATAGAAATGTACTCCAAGTGTGGCAGCATTAAGGATGCCCTCAGAGTTTTTCAGTCTATTCCCAAGAAGAAATTGGGGCATTGGACGGCTATAATTGTAGGCTTGGGAATGCATGGTTTGGTGGAGCAAACTCTTGAGCTATTTGATGAAATGTGCAGAACTGGGTTGAAGCCACATGCTATTACTTTCATTGGAGTGTTGAATGCTTGTAGTCATGCAGGATTTGCCAAAGAGGCACGTCGGTACTTCAAAACAATGACAGATGATTTTGGAATCGAGCCTTCTATTGAACACTACGGTTGCTTGATTGATGCTCTGTGTCGAGCTGGATACCTTGAAGAGGCAAGGCATACCATCGAGAGAATGCCCATCAAAGCAAACTATGTAATTTGGATGAGTCTGCTAAGTGGTTCAAGGAAACATGGTAACACAAGAATGGGGGAATATGCAGCTCATCATCTGATGGATCTAGCACCGGATACTACTGGATGTTATGTTATTCTTTCGAACATGTATGCTGCAACTGGCTTGTGGGAAAAAGTTCGTCAAGTTCGAGAAATGATGAAGAAAAAAGGAATCAGAAAGGATCCAGGATGCAGTTCCATTGAGCATCAAGGTTCAATCCATGAGTTCATTGTGGGAGATAGGTCACATCCTCAAACCGAAGAGATCTACGTCAAGCTGCATGAGATGAAAGAGAAGTTGAATGTAGCGGGACACATTCCCGACACGACGCAAGTTCTGTTATGCCTTGAAGAGGATAATGAGAAAGAAGCAGAACTTGAAACCCACAGTGAGAGGTTAGCAATAGCTTTTGGTCTTCTTAATATCAAGCATGGAAGTCCTATCCGCATTATAAAGAATCTTCGTATTTGCAATGATTGCCATGCTGTGACTAAATTTATATCTGATATTTATAACCGTGAGATCATTATCAGAGATGGTAGTCGATTCCATCACTTTAAAAGTGGGTCATGTTCTTGTAAGGATTTTTGGTGA

Coding sequence (CDS)

ATGATGGCGTCTCTTACACTTTCACACTCCCTCCAGCCATTTCTCCCTTGCAACCTTCATTTTCCTCTTCAAAACTGCGAAACTGAACGAGAAGCGAAGCAATTCCACGCTCTCTCGCTCAAAACAGGCTCATTGAATCACCCTTCGATATCTCCTCGTCTTTTGGCTCTCTATGCAAATCCCAGAATCAACAATCTCGAATATGTTCAATCCCTCTTTGACTGGATTCGAAAACCCACTTTGGTTTCTTGGAATATGCTCATCAAGTGCTACATTGAGAATCAACGTTCAAATGATGCCATTGCGTTGTTCTGCAAATTGCTCTGTGAGTTTATGCCTGATTCTTTTACATTACCTTGTGTCCTAAAGGGTTGTGCTCGATTGAGTGCACTACAGGAAGGGAAACAGATTCATGGGTTGATATTGAAAATTGGGATTGGTATGGATAAGTTTGTTTTGAGTAGTTTGGTTAATATGTATTCTAAATGTGGTGAGATTGAGATGTGTAGGAAAGTGTTCGATCGAATGGAAGATAAGGATGTAGTATCATGGAATTCTTTGATTGATGGGTATGCTAGATGTGGTGAAATTGAACTTGCACTGGAGTTGTTTGATGAAATGCCTGAGAAGGATAATTTCTCATGGACTATTCTGGTTGATGGGCTTTCTAAAAGTGGGAAGCTCAAGGCTGCTAGAGACGTGTTCGATCGAATGCCTACTCGAAATTCTGTATCTTGGAATGCTATGATTGATGGCTACATGAAAGCTGGGAAGTTTAACACAGCACGAGAATTATTCGATTGGATGCCAGAGAGAAACCACGTTTCATGGAATTCAATGATCACTGGATATGAGCTGAACAAGCAGTTCACTCAAGCCTTGAAGCTGTTTGAGGTCATGTTGACTGAAGATATATCACCCAATCATGCCACTCTCGTTGGAGCTCTTTCTGCAGCTTCAGGATTGGCTAGTCTTGGGAATGGAAGATGGGTTCATTCCTATATAGTGAAAAATCGATTCAAAACAGACGGTGTGCTCGGCACATCGCTGATAGAAATGTACTCCAAGTGTGGCAGCATTAAGGATGCCCTCAGAGTTTTTCAGTCTATTCCCAAGAAGAAATTGGGGCATTGGACGGCTATAATTGTAGGCTTGGGAATGCATGGTTTGGTGGAGCAAACTCTTGAGCTATTTGATGAAATGTGCAGAACTGGGTTGAAGCCACATGCTATTACTTTCATTGGAGTGTTGAATGCTTGTAGTCATGCAGGATTTGCCAAAGAGGCACGTCGGTACTTCAAAACAATGACAGATGATTTTGGAATCGAGCCTTCTATTGAACACTACGGTTGCTTGATTGATGCTCTGTGTCGAGCTGGATACCTTGAAGAGGCAAGGCATACCATCGAGAGAATGCCCATCAAAGCAAACTATGTAATTTGGATGAGTCTGCTAAGTGGTTCAAGGAAACATGGTAACACAAGAATGGGGGAATATGCAGCTCATCATCTGATGGATCTAGCACCGGATACTACTGGATGTTATGTTATTCTTTCGAACATGTATGCTGCAACTGGCTTGTGGGAAAAAGTTCGTCAAGTTCGAGAAATGATGAAGAAAAAAGGAATCAGAAAGGATCCAGGATGCAGTTCCATTGAGCATCAAGGTTCAATCCATGAGTTCATTGTGGGAGATAGGTCACATCCTCAAACCGAAGAGATCTACGTCAAGCTGCATGAGATGAAAGAGAAGTTGAATGTAGCGGGACACATTCCCGACACGACGCAAGTTCTGTTATGCCTTGAAGAGGATAATGAGAAAGAAGCAGAACTTGAAACCCACAGTGAGAGGTTAGCAATAGCTTTTGGTCTTCTTAATATCAAGCATGGAAGTCCTATCCGCATTATAAAGAATCTTCGTATTTGCAATGATTGCCATGCTGTGACTAAATTTATATCTGATATTTATAACCGTGAGATCATTATCAGAGATGGTAGTCGATTCCATCACTTTAAAAGTGGGTCATGTTCTTGTAAGGATTTTTGGTGA

Protein sequence

MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREIIIRDGSRFHHFKSGSCSCKDFW
Homology
BLAST of Carg04154 vs. NCBI nr
Match: KAG7011869.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1416.0 bits (3664), Expect = 0.0e+00
Identity = 682/682 (100.00%), Postives = 682/682 (100.00%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. NCBI nr
Match: KAG6572234.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1395.2 bits (3610), Expect = 0.0e+00
Identity = 673/682 (98.68%), Postives = 677/682 (99.27%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MM SLTLSHSLQPF P NLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1   MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNSVSWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATL+GA SAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. NCBI nr
Match: XP_022953072.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata] >XP_022953073.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1386.7 bits (3588), Expect = 0.0e+00
Identity = 668/682 (97.95%), Postives = 675/682 (98.97%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MM SLTLSHSLQPF P NLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1   MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNSVSWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATL+GA SAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHG+TRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGSTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. NCBI nr
Match: XP_022969015.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 663/682 (97.21%), Postives = 673/682 (98.68%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MM SLTLSHSL PFLPCNLHFPLQNCETEREAKQFHALS+KTGSLN PSIS RLLALYAN
Sbjct: 1   MMPSLTLSHSLLPFLPCNLHFPLQNCETEREAKQFHALSVKTGSLNDPSISLRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNS+SWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSISWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATL+GALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRVFQSIPK+KLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKRKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFA+EARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAEEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWE  RQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWENFRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. NCBI nr
Match: XP_023554422.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1373.2 bits (3553), Expect = 0.0e+00
Identity = 660/682 (96.77%), Postives = 671/682 (98.39%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MMASL LSHSLQPFLPCNLHFPLQ+CETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1   MMASLALSHSLQPFLPCNLHFPLQSCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLI+KIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLIVKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNSVSWNAMI+GYMKAGKFN ARELFD MPERNHVSWNSMITGYELNKQF QALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNMARELFDRMPERNHVSWNSMITGYELNKQFIQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATL+GALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRV QSIP KKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVCQSIPNKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGY+EEA+ TIERMP+KAN+VI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYIEEAKDTIERMPVKANHVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKL EMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLREMKEKLNVAGHVPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNI HGSPIRIIKNLRICNDCHAVTK ISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNINHGSPIRIIKNLRICNDCHAVTKLISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 5.4e-159
Identity = 291/704 (41.34%), Postives = 419/704 (59.52%), Query Frame = 0

Query: 23  LQNCETEREAKQFHALSLKTGSLN-HPSISPRLLALYANPRINNLEYVQSLFDWIRKPTL 82
           L NC+T +  +  HA  +K G  N + ++S  +     +P    L Y  S+F  I++P L
Sbjct: 40  LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99

Query: 83  VSWNMLIKCYIENQRSNDAIALF-CKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGL 142
           + WN + + +  +     A+ L+ C +    +P+S+T P VLK CA+  A +EG+QIHG 
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
           +LK+G  +D +V +SL++MY + G +E   KVFD+   +DVVS+ +LI GYA  G IE A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 203 LELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVF-DRMPT------------------- 262
            +LFDE+P KD  SW  ++ G +++G  K A ++F D M T                   
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279

Query: 263 ------RNSVSW-------------NAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
                 R    W             NA+ID Y K G+  TA  LF+ +P ++ +SWN++I
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339

Query: 323 TGYELNKQFTQALKLFEVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFK 382
            GY     + +AL LF+ ML    +PN  T++  L A + L ++  GRW+H YI K R K
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-RLK 399

Query: 383 ---TDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELF 442
                  L TSLI+MY+KCG I+ A +VF SI  K L  W A+I G  MHG  + + +LF
Sbjct: 400 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 459

Query: 443 DEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCR 502
             M + G++P  ITF+G+L+ACSH+G     R  F+TMT D+ + P +EHYGC+ID L  
Sbjct: 460 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 519

Query: 503 AGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVIL 562
           +G  +EA   I  M ++ + VIW SLL   + HGN  +GE  A +L+ + P+  G YV+L
Sbjct: 520 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 579

Query: 563 SNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKL 622
           SN+YA+ G W +V + R ++  KG++K PGCSSIE    +HEFI+GD+ HP+  EIY  L
Sbjct: 580 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 639

Query: 623 HEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKN 682
            EM+  L  AG +PDT++VL  +EE+  KE  L  HSE+LAIAFGL++ K G+ + I+KN
Sbjct: 640 EEMEVLLEKAGFVPDTSEVLQEMEEE-WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 699

BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 9.3e-159
Identity = 273/702 (38.89%), Postives = 425/702 (60.54%), Query Frame = 0

Query: 23  LQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIRKPTLV 82
           ++ C + R+ KQ H   ++TG+ + P  + +L A+ A     +LEY + +FD I KP   
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96

Query: 83  SWNMLIKCYIENQRSNDAIALFCKLLCEFM--PDSFTLPCVLKGCARLSALQEGKQIHGL 142
           +WN LI+ Y        +I  F  ++ E    P+ +T P ++K  A +S+L  G+ +HG+
Sbjct: 97  AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156

Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
            +K  +G D FV +SL++ Y  CG+++   KVF  +++KDVVSWNS+I+G+ + G  + A
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216

Query: 203 LELFDEMPEKD------------------------------------NFSWTI---LVDG 262
           LELF +M  +D                                    N + T+   ++D 
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276

Query: 263 LSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
            +K G ++ A+ +FD M  +++V+W  M+DGY  +  +  ARE+ + MP+++ V+WN++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336

Query: 323 TGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRF 382
           + YE N +  +AL +F E+ L +++  N  TLV  LSA + + +L  GRW+HSYI K+  
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396

Query: 383 KTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDE 442
           + +  + ++LI MYSKCG ++ +  VF S+ K+ +  W+A+I GL MHG   + +++F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456

Query: 443 MCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAG 502
           M    +KP+ +TF  V  ACSH G   EA   F  M  ++GI P  +HY C++D L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516

Query: 503 YLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSN 562
           YLE+A   IE MPI  +  +W +LL   + H N  + E A   L++L P   G +V+LSN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576

Query: 563 MYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHE 622
           +YA  G WE V ++R+ M+  G++K+PGCSSIE  G IHEF+ GD +HP +E++Y KLHE
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636

Query: 623 MKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLR 682
           + EKL   G+ P+ +QVL  +EE+  KE  L  HSE+LAI +GL++ +    IR+IKNLR
Sbjct: 637 VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLR 696

BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.3e-155
Identity = 289/673 (42.94%), Postives = 403/673 (59.88%), Query Frame = 0

Query: 16  PCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRIN--NLEYVQSLF 75
           P +L   + NC T R+  Q HA+ +K+G +     +  +L   A   ++  +L+Y   +F
Sbjct: 23  PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82

Query: 76  DWIRKPTLVSWNMLIKCYIENQRSND--AIALFCKLLC-EFM-PDSFTLPCVLKGCARLS 135
           + + +    SWN +I+ + E+       AI LF +++  EF+ P+ FT P VLK CA+  
Sbjct: 83  NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142

Query: 136 ALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLID 195
            +QEGKQIHGL LK G G D+FV+S+LV MY  CG           M+D  V+ + ++I 
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG----------FMKDARVLFYKNII- 202

Query: 196 GYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAM 255
                              EKD     ++ D   + G++               V WN M
Sbjct: 203 -------------------EKD---MVVMTDRRKRDGEI---------------VLWNVM 262

Query: 256 IDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVMLTEDISPNH 315
           IDGYM+ G    AR LFD M +R+ VSWN+MI+GY LN  F  A+++F  M   DI PN+
Sbjct: 263 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 322

Query: 316 ATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQS 375
            TLV  L A S L SL  G W+H Y   +  + D VLG++LI+MYSKCG I+ A+ VF+ 
Sbjct: 323 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 382

Query: 376 IPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEA 435
           +P++ +  W+A+I G  +HG     ++ F +M + G++P  + +I +L ACSH G  +E 
Sbjct: 383 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 442

Query: 436 RRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIWMSLLSGSR 495
           RRYF  M    G+EP IEHYGC++D L R+G L+EA   I  MPIK + VIW +LL   R
Sbjct: 443 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 502

Query: 496 KHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKKGIRKDPGC 555
             GN  MG+  A+ LMD+ P  +G YV LSNMYA+ G W +V ++R  MK+K IRKDPGC
Sbjct: 503 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 562

Query: 556 SSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEA 615
           S I+  G +HEF+V D SHP+ +EI   L E+ +KL +AG+ P TTQVLL LEE+ +KE 
Sbjct: 563 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKEN 622

Query: 616 ELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREIIIRDGSRFH 675
            L  HSE++A AFGL++   G PIRI+KNLRIC DCH+  K IS +Y R+I +RD  RFH
Sbjct: 623 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 646

Query: 676 HFKSGSCSCKDFW 683
           HF+ GSCSC D+W
Sbjct: 683 HFQDGSCSCMDYW 646

BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 7.4e-148
Identity = 264/681 (38.77%), Postives = 397/681 (58.30%), Query Frame = 0

Query: 4   SLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRI 63
           S +L H+L   + C     LQ C  + E KQ HA  LKTG +       + L+   +   
Sbjct: 7   SFSLEHNLYETMSC-----LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 66

Query: 64  NN-LEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMP-DSFTLPCV 123
           ++ L Y Q +FD   +P    WN++I+ +  +     ++ L+ ++LC   P +++T P +
Sbjct: 67  SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 126

Query: 124 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 183
           LK C+ LSA +E  QIH  I K+G   D + ++SL+N Y+  G  ++   +FDR+ + D 
Sbjct: 127 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 186

Query: 184 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 243
           VSWNS+I GY + G++++AL LF +M EK                               
Sbjct: 187 VSWNSVIKGYVKAGKMDIALTLFRKMAEK------------------------------- 246

Query: 244 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 303
           N++SW  MI GY++A                            ++NK   +AL+LF  M 
Sbjct: 247 NAISWTTMISGYVQA----------------------------DMNK---EALQLFHEMQ 306

Query: 304 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 363
             D+ P++ +L  ALSA + L +L  G+W+HSY+ K R + D VLG  LI+MY+KCG ++
Sbjct: 307 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 366

Query: 364 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 423
           +AL VF++I KK +  WTA+I G   HG   + +  F EM + G+KP+ ITF  VL ACS
Sbjct: 367 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 426

Query: 424 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 483
           + G  +E +  F +M  D+ ++P+IEHYGC++D L RAG L+EA+  I+ MP+K N VIW
Sbjct: 427 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 486

Query: 484 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 543
            +LL   R H N  +GE     L+ + P   G YV  +N++A    W+K  + R +MK++
Sbjct: 487 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 546

Query: 544 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 603
           G+ K PGCS+I  +G+ HEF+ GDRSHP+ E+I  K   M+ KL   G++P+  ++LL L
Sbjct: 547 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 606

Query: 604 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 663
            +D+E+EA +  HSE+LAI +GL+  K G+ IRI+KNLR+C DCH VTK IS IY R+I+
Sbjct: 607 VDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIV 620

Query: 664 IRDGSRFHHFKSGSCSCKDFW 683
           +RD +RFHHF+ G CSC D+W
Sbjct: 667 MRDRTRFHHFRDGKCSCGDYW 620

BLAST of Carg04154 vs. ExPASy Swiss-Prot
Match: Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 3.5e-142
Identity = 260/707 (36.78%), Postives = 397/707 (56.15%), Query Frame = 0

Query: 21  FPLQNCETER---EAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIR 80
           F L  C   R      Q H L +K G      +   L+  YA      L+  + +FD + 
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMS 198

Query: 81  KPTLVSWNMLIKCYIENQRSNDAIALFCKLLC--EFMPDSFTLPCVLKGCARLSALQEGK 140
           +  +VSW  +I  Y     + DA+ LF +++   E  P+S T+ CV+  CA+L  L+ G+
Sbjct: 199 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 258

Query: 141 QIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCG 200
           +++  I   GI ++  ++S+LV+MY KC  I++ +++FD     ++   N++   Y R G
Sbjct: 259 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 318

Query: 201 EIELALELFDEMPEKD-------------------NFSW--------------------T 260
               AL +F+ M +                     N  W                     
Sbjct: 319 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 378

Query: 261 ILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVS 320
            L+D   K  +   A  +FDRM  +  V+WN+++ GY++ G+ + A E F+ MPE+N VS
Sbjct: 379 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 438

Query: 321 WNSMITGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYI 380
           WN++I+G      F +A+++F  +   E ++ +  T++   SA   L +L   +W++ YI
Sbjct: 439 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 498

Query: 381 VKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTL 440
            KN  + D  LGT+L++M+S+CG  + A+ +F S+  + +  WTA I  + M G  E+ +
Sbjct: 499 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 558

Query: 441 ELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDA 500
           ELFD+M   GLKP  + F+G L ACSH G  ++ +  F +M    G+ P   HYGC++D 
Sbjct: 559 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 618

Query: 501 LCRAGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCY 560
           L RAG LEEA   IE MP++ N VIW SLL+  R  GN  M  YAA  +  LAP+ TG Y
Sbjct: 619 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 678

Query: 561 VILSNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIY 620
           V+LSN+YA+ G W  + +VR  MK+KG+RK PG SSI+ +G  HEF  GD SHP+   I 
Sbjct: 679 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 738

Query: 621 VKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRI 680
             L E+ ++ +  GH+PD + VL+ ++E  EK   L  HSE+LA+A+GL++   G+ IRI
Sbjct: 739 AMLDEVSQRASHLGHVPDLSNVLMDVDE-KEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 798

Query: 681 IKNLRICNDCHAVTKFISDIYNREIIIRDGSRFHHFKSGSCSCKDFW 683
           +KNLR+C+DCH+  KF S +YNREII+RD +RFH+ + G CSC DFW
Sbjct: 799 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842

BLAST of Carg04154 vs. ExPASy TrEMBL
Match: A0A6J1GM70 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455587 PE=3 SV=1)

HSP 1 Score: 1386.7 bits (3588), Expect = 0.0e+00
Identity = 668/682 (97.95%), Postives = 675/682 (98.97%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MM SLTLSHSLQPF P NLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN
Sbjct: 1   MMPSLTLSHSLQPFFPGNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNSVSWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSVSWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATL+GA SAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGAFSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHG+TRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK
Sbjct: 481 WMSLLSGSRKHGSTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. ExPASy TrEMBL
Match: A0A6J1HYS6 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111468139 PE=3 SV=1)

HSP 1 Score: 1378.2 bits (3566), Expect = 0.0e+00
Identity = 663/682 (97.21%), Postives = 673/682 (98.68%), Query Frame = 0

Query: 1   MMASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYAN 60
           MM SLTLSHSL PFLPCNLHFPLQNCETEREAKQFHALS+KTGSLN PSIS RLLALYAN
Sbjct: 1   MMPSLTLSHSLLPFLPCNLHFPLQNCETEREAKQFHALSVKTGSLNDPSISLRLLALYAN 60

Query: 61  PRINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120
           PRINNLEY QSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC
Sbjct: 61  PRINNLEYAQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPC 120

Query: 121 VLKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKD 180
           VLKGCARLSALQEGKQIHGLILKIGIG+DKFVLSSLVNMYSKCGEIE+CRKVFDRMEDKD
Sbjct: 121 VLKGCARLSALQEGKQIHGLILKIGIGVDKFVLSSLVNMYSKCGEIELCRKVFDRMEDKD 180

Query: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240
           VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT
Sbjct: 181 VVSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPT 240

Query: 241 RNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300
           RNS+SWNAMI+GYMKAGKFNTARELFD MPERNHVSWNSMITGYELNKQFTQALKLFEVM
Sbjct: 241 RNSISWNAMINGYMKAGKFNTARELFDRMPERNHVSWNSMITGYELNKQFTQALKLFEVM 300

Query: 301 LTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360
           LTEDISPNHATL+GALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI
Sbjct: 301 LTEDISPNHATLLGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSI 360

Query: 361 KDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420
           KDALRVFQSIPK+KLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC
Sbjct: 361 KDALRVFQSIPKRKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNAC 420

Query: 421 SHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVI 480
           SHAGFA+EARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEA+ TIERMPIKANYVI
Sbjct: 421 SHAGFAEEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEAKDTIERMPIKANYVI 480

Query: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKK 540
           WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWE  RQVREMMKK
Sbjct: 481 WMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWENFRQVREMMKK 540

Query: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLC 600
           KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGH+PDTTQVLLC
Sbjct: 541 KGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHVPDTTQVLLC 600

Query: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660
           LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI
Sbjct: 601 LEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREI 660

Query: 661 IIRDGSRFHHFKSGSCSCKDFW 683
           IIRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IIRDGSRFHHFKSGSCSCKDFW 682

BLAST of Carg04154 vs. ExPASy TrEMBL
Match: A0A6J1C6D9 (pentatricopeptide repeat-containing protein At5g48910-like OS=Momordica charantia OX=3673 GN=LOC111007802 PE=3 SV=1)

HSP 1 Score: 1259.6 bits (3258), Expect = 0.0e+00
Identity = 595/681 (87.37%), Postives = 639/681 (93.83%), Query Frame = 0

Query: 2   MASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
           M SL LSHSL PFLP NLHFPLQNCETERE KQ HALSLKTGS NHPSIS RLLALY +P
Sbjct: 1   MLSLALSHSLLPFLPRNLHFPLQNCETEREVKQLHALSLKTGSFNHPSISSRLLALYTDP 60

Query: 62  RINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
           RINNLEY +SLFDWIR+PTLVSWN+L+KCY+ENQRSNDAI+LFC+LL EF+PDSFTLPCV
Sbjct: 61  RINNLEYARSLFDWIREPTLVSWNLLVKCYVENQRSNDAISLFCELLSEFIPDSFTLPCV 120

Query: 122 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 181
           LKGCARLSAL EGKQIHGLILKIG G+DKFVLSSLV+MYSKCGEIE+CRKVFDRMEDKDV
Sbjct: 121 LKGCARLSALDEGKQIHGLILKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180

Query: 182 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 241
           VSWNSLIDGYARCG+IELALE+FDEMPE+D+FSWTILVDGLSKSGKL+ ARDVFDRMPTR
Sbjct: 181 VSWNSLIDGYARCGQIELALEVFDEMPERDSFSWTILVDGLSKSGKLETARDVFDRMPTR 240

Query: 242 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 301
           NSVSWNAMI+GYMKAG FNTARELFD MPERN V+WNSMITGYELN+QF+QALKLFEVML
Sbjct: 241 NSVSWNAMINGYMKAGDFNTARELFDQMPERNLVTWNSMITGYELNRQFSQALKLFEVML 300

Query: 302 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 361
            E+ISPNHAT++GALSAASGL S G GRWVHS+IVKN F+TDGVLGTSLIEMYSKCGSI 
Sbjct: 301 REEISPNHATILGALSAASGLVSFGKGRWVHSFIVKNGFETDGVLGTSLIEMYSKCGSIA 360

Query: 362 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 421
            ALRVF+SIPKKKLGHWTAIIVGLGMHGLV QTLELFDEMCR GLKPHAITFIG+LNACS
Sbjct: 361 SALRVFKSIPKKKLGHWTAIIVGLGMHGLVGQTLELFDEMCRIGLKPHAITFIGLLNACS 420

Query: 422 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 481
           HAGFA +A  YFK M DD+GIEPSIEHYGCLID LCRAG LEEA++TIERMPIK N VIW
Sbjct: 421 HAGFADDAYHYFKMMMDDYGIEPSIEHYGCLIDVLCRAGCLEEAKNTIERMPIKPNKVIW 480

Query: 482 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 541
           MSLLSGSRKHGN RMGEYAAHHL+DLAPDTTGCY+ILSNMYA  GLWEKVRQVREMMKKK
Sbjct: 481 MSLLSGSRKHGNIRMGEYAAHHLIDLAPDTTGCYIILSNMYAGAGLWEKVRQVREMMKKK 540

Query: 542 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 601
           GIRKDPGCSSIEHQGS+HEFIVGDRSHPQTEEIY+KL EMKEKLNVAGH+PDTTQVLLCL
Sbjct: 541 GIRKDPGCSSIEHQGSVHEFIVGDRSHPQTEEIYIKLSEMKEKLNVAGHVPDTTQVLLCL 600

Query: 602 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 661
           E+DNEKE+ELETHSERLAIAFGL+NIKHG+P+RIIKNLRICNDCH V+K +S IYNREII
Sbjct: 601 EDDNEKESELETHSERLAIAFGLINIKHGNPVRIIKNLRICNDCHTVSKLLSHIYNREII 660

Query: 662 IRDGSRFHHFKSGSCSCKDFW 683
           IRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IRDGSRFHHFKSGSCSCKDFW 681

BLAST of Carg04154 vs. ExPASy TrEMBL
Match: A0A5D3D6Y7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00490 PE=3 SV=1)

HSP 1 Score: 1258.8 bits (3256), Expect = 0.0e+00
Identity = 599/681 (87.96%), Postives = 641/681 (94.13%), Query Frame = 0

Query: 2   MASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
           M SLTLSHSLQPFLP NLHFPLQNC TEREA Q HALS+KT SLNHPS+S  LLALYA+P
Sbjct: 1   MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60

Query: 62  RINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
            INNL+Y QSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61  TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120

Query: 122 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 181
           LKGCARL ALQEGKQIHGL+LKIG G+DKFVLSSLV+MYSKCGEIE+CRKVFDRMEDKDV
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180

Query: 182 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 241
           VSWNSLIDGYARCGEIELALE+F+EMPEKD+FSWTIL+DGLSKSGKL+AAR VFDRMP R
Sbjct: 181 VSWNSLIDGYARCGEIELALEVFEEMPEKDSFSWTILIDGLSKSGKLEAARYVFDRMPIR 240

Query: 242 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 301
           NSVSWNAMI+GYMKAG  NTA+ELFD MPER+ V+WNSMITGYE NKQFT+ALKLFEVML
Sbjct: 241 NSVSWNAMINGYMKAGDSNTAQELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVML 300

Query: 302 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 361
            EDISPN+ T++GA+SAASGL SLG GRWVHSYIVKN FKTDGVLGT LIEMYSKCGS+K
Sbjct: 301 REDISPNYTTILGAVSAASGLVSLGTGRWVHSYIVKNGFKTDGVLGTLLIEMYSKCGSVK 360

Query: 362 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 421
            ALRVF+ I KKKLGHWT+IIVGLGMHGLVEQTLELFDEMCRTGL+PHAITFIGVLNACS
Sbjct: 361 SALRVFRFISKKKLGHWTSIIVGLGMHGLVEQTLELFDEMCRTGLQPHAITFIGVLNACS 420

Query: 422 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 481
           HAGFA++A RYFK MT D+GI+P+IEHYGCLID LCRAGYLEEA+ TIERMPIKAN VIW
Sbjct: 421 HAGFAEDAHRYFKMMTSDYGIKPTIEHYGCLIDVLCRAGYLEEAKDTIERMPIKANKVIW 480

Query: 482 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 541
            SLLSGSRKHGN RMGEYAA HL+DLAPDTTGCYVILSNMYAATGLWEKVRQVREMMK+K
Sbjct: 481 TSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKEK 540

Query: 542 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 601
           GIRKDPGCSSIEHQGSIHEFIVGD+SHPQTEEIY+KL EMK+KLNVAGHIPDT+QVLLCL
Sbjct: 541 GIRKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLREMKKKLNVAGHIPDTSQVLLCL 600

Query: 602 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 661
           EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK +S IYNREII
Sbjct: 601 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREII 660

Query: 662 IRDGSRFHHFKSGSCSCKDFW 683
           IRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IRDGSRFHHFKSGSCSCKDFW 681

BLAST of Carg04154 vs. ExPASy TrEMBL
Match: A0A1S3CG66 (pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=3656 GN=LOC103500522 PE=3 SV=1)

HSP 1 Score: 1258.4 bits (3255), Expect = 0.0e+00
Identity = 599/681 (87.96%), Postives = 641/681 (94.13%), Query Frame = 0

Query: 2   MASLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANP 61
           M SLTLSHSLQPFLP NLHFPLQNC TEREA Q HALS+KT SLNHPS+S  LLALYA+P
Sbjct: 1   MLSLTLSHSLQPFLPPNLHFPLQNCRTEREANQLHALSIKTASLNHPSVSSPLLALYAHP 60

Query: 62  RINNLEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMPDSFTLPCV 121
            INNL+Y QSLFDWI+KPTLVSWN+LIKCYIENQRSNDAIALFCKLLC+FMPDSFTLPCV
Sbjct: 61  TINNLQYAQSLFDWIQKPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFMPDSFTLPCV 120

Query: 122 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 181
           LKGCARL ALQEGKQIHGL+LKIG G+DKFVLSSLV+MYSKCGEIE+CRKVFDRMEDKDV
Sbjct: 121 LKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDV 180

Query: 182 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 241
           VSWNSLIDGYARCGEIELALE+F+EMPEKD+FSWTIL+DGLSKSGKL+AAR VFDRMP R
Sbjct: 181 VSWNSLIDGYARCGEIELALEVFEEMPEKDSFSWTILIDGLSKSGKLEAARYVFDRMPIR 240

Query: 242 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 301
           NSVSWNAMI+GYMKAG  NTA+ELFD MPER+ V+WNSMITGYE NKQFT+ALKLFEVML
Sbjct: 241 NSVSWNAMINGYMKAGYSNTAQELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVML 300

Query: 302 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 361
            EDISPN+ T++GA+SAASGL SLG GRWVHSYIVKN FKTDGVLGT LIEMYSKCGS+K
Sbjct: 301 REDISPNYTTILGAVSAASGLVSLGTGRWVHSYIVKNGFKTDGVLGTLLIEMYSKCGSVK 360

Query: 362 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 421
            ALRVF+ I KKKLGHWT+IIVGLGMHGLVEQTLELFDEMCRTGL+PHAITFIGVLNACS
Sbjct: 361 SALRVFRFISKKKLGHWTSIIVGLGMHGLVEQTLELFDEMCRTGLQPHAITFIGVLNACS 420

Query: 422 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 481
           HAGFA++A RYFK MT D+GI+P+IEHYGCLID LCRAGYLEEA+ TIERMPIKAN VIW
Sbjct: 421 HAGFAEDAHRYFKMMTSDYGIKPTIEHYGCLIDVLCRAGYLEEAKDTIERMPIKANKVIW 480

Query: 482 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 541
            SLLSGSRKHGN RMGEYAA HL+DLAPDTTGCYVILSNMYAATGLWEKVRQVREMMK+K
Sbjct: 481 TSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKEK 540

Query: 542 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 601
           GIRKDPGCSSIEHQGSIHEFIVGD+SHPQTEEIY+KL EMK+KLNVAGHIPDT+QVLLCL
Sbjct: 541 GIRKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLREMKKKLNVAGHIPDTSQVLLCL 600

Query: 602 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 661
           EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTK +S IYNREII
Sbjct: 601 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSHIYNREII 660

Query: 662 IRDGSRFHHFKSGSCSCKDFW 683
           IRDGSRFHHFKSGSCSCKDFW
Sbjct: 661 IRDGSRFHHFKSGSCSCKDFW 681

BLAST of Carg04154 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 562.8 bits (1449), Expect = 3.9e-160
Identity = 291/704 (41.34%), Postives = 419/704 (59.52%), Query Frame = 0

Query: 23  LQNCETEREAKQFHALSLKTGSLN-HPSISPRLLALYANPRINNLEYVQSLFDWIRKPTL 82
           L NC+T +  +  HA  +K G  N + ++S  +     +P    L Y  S+F  I++P L
Sbjct: 40  LHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNL 99

Query: 83  VSWNMLIKCYIENQRSNDAIALF-CKLLCEFMPDSFTLPCVLKGCARLSALQEGKQIHGL 142
           + WN + + +  +     A+ L+ C +    +P+S+T P VLK CA+  A +EG+QIHG 
Sbjct: 100 LIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGH 159

Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
           +LK+G  +D +V +SL++MY + G +E   KVFD+   +DVVS+ +LI GYA  G IE A
Sbjct: 160 VLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 203 LELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVF-DRMPT------------------- 262
            +LFDE+P KD  SW  ++ G +++G  K A ++F D M T                   
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279

Query: 263 ------RNSVSW-------------NAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
                 R    W             NA+ID Y K G+  TA  LF+ +P ++ +SWN++I
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339

Query: 323 TGYELNKQFTQALKLFEVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFK 382
            GY     + +AL LF+ ML    +PN  T++  L A + L ++  GRW+H YI K R K
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK-RLK 399

Query: 383 ---TDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELF 442
                  L TSLI+MY+KCG I+ A +VF SI  K L  W A+I G  MHG  + + +LF
Sbjct: 400 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 459

Query: 443 DEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCR 502
             M + G++P  ITF+G+L+ACSH+G     R  F+TMT D+ + P +EHYGC+ID L  
Sbjct: 460 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 519

Query: 503 AGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVIL 562
           +G  +EA   I  M ++ + VIW SLL   + HGN  +GE  A +L+ + P+  G YV+L
Sbjct: 520 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 579

Query: 563 SNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKL 622
           SN+YA+ G W +V + R ++  KG++K PGCSSIE    +HEFI+GD+ HP+  EIY  L
Sbjct: 580 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 639

Query: 623 HEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKN 682
            EM+  L  AG +PDT++VL  +EE+  KE  L  HSE+LAIAFGL++ K G+ + I+KN
Sbjct: 640 EEMEVLLEKAGFVPDTSEVLQEMEEE-WKEGALRHHSEKLAIAFGLISTKPGTKLTIVKN 699

BLAST of Carg04154 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 562.0 bits (1447), Expect = 6.6e-160
Identity = 273/702 (38.89%), Postives = 425/702 (60.54%), Query Frame = 0

Query: 23  LQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIRKPTLV 82
           ++ C + R+ KQ H   ++TG+ + P  + +L A+ A     +LEY + +FD I KP   
Sbjct: 37  IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96

Query: 83  SWNMLIKCYIENQRSNDAIALFCKLLCEFM--PDSFTLPCVLKGCARLSALQEGKQIHGL 142
           +WN LI+ Y        +I  F  ++ E    P+ +T P ++K  A +S+L  G+ +HG+
Sbjct: 97  AWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGM 156

Query: 143 ILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCGEIELA 202
            +K  +G D FV +SL++ Y  CG+++   KVF  +++KDVVSWNS+I+G+ + G  + A
Sbjct: 157 AVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKA 216

Query: 203 LELFDEMPEKD------------------------------------NFSWTI---LVDG 262
           LELF +M  +D                                    N + T+   ++D 
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDM 276

Query: 263 LSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMI 322
            +K G ++ A+ +FD M  +++V+W  M+DGY  +  +  ARE+ + MP+++ V+WN++I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336

Query: 323 TGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRF 382
           + YE N +  +AL +F E+ L +++  N  TLV  LSA + + +L  GRW+HSYI K+  
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396

Query: 383 KTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDE 442
           + +  + ++LI MYSKCG ++ +  VF S+ K+ +  W+A+I GL MHG   + +++F +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456

Query: 443 MCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAG 502
           M    +KP+ +TF  V  ACSH G   EA   F  M  ++GI P  +HY C++D L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516

Query: 503 YLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSN 562
           YLE+A   IE MPI  +  +W +LL   + H N  + E A   L++L P   G +V+LSN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576

Query: 563 MYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHE 622
           +YA  G WE V ++R+ M+  G++K+PGCSSIE  G IHEF+ GD +HP +E++Y KLHE
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636

Query: 623 MKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLR 682
           + EKL   G+ P+ +QVL  +EE+  KE  L  HSE+LAI +GL++ +    IR+IKNLR
Sbjct: 637 VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLR 696

BLAST of Carg04154 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 551.6 bits (1420), Expect = 8.9e-157
Identity = 289/673 (42.94%), Postives = 403/673 (59.88%), Query Frame = 0

Query: 16  PCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRIN--NLEYVQSLF 75
           P +L   + NC T R+  Q HA+ +K+G +     +  +L   A   ++  +L+Y   +F
Sbjct: 23  PSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82

Query: 76  DWIRKPTLVSWNMLIKCYIENQRSND--AIALFCKLLC-EFM-PDSFTLPCVLKGCARLS 135
           + + +    SWN +I+ + E+       AI LF +++  EF+ P+ FT P VLK CA+  
Sbjct: 83  NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142

Query: 136 ALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLID 195
            +QEGKQIHGL LK G G D+FV+S+LV MY  CG           M+D  V+ + ++I 
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCG----------FMKDARVLFYKNII- 202

Query: 196 GYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAM 255
                              EKD     ++ D   + G++               V WN M
Sbjct: 203 -------------------EKD---MVVMTDRRKRDGEI---------------VLWNVM 262

Query: 256 IDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVMLTEDISPNH 315
           IDGYM+ G    AR LFD M +R+ VSWN+MI+GY LN  F  A+++F  M   DI PN+
Sbjct: 263 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 322

Query: 316 ATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQS 375
            TLV  L A S L SL  G W+H Y   +  + D VLG++LI+MYSKCG I+ A+ VF+ 
Sbjct: 323 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 382

Query: 376 IPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEA 435
           +P++ +  W+A+I G  +HG     ++ F +M + G++P  + +I +L ACSH G  +E 
Sbjct: 383 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 442

Query: 436 RRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIWMSLLSGSR 495
           RRYF  M    G+EP IEHYGC++D L R+G L+EA   I  MPIK + VIW +LL   R
Sbjct: 443 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 502

Query: 496 KHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKKGIRKDPGC 555
             GN  MG+  A+ LMD+ P  +G YV LSNMYA+ G W +V ++R  MK+K IRKDPGC
Sbjct: 503 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 562

Query: 556 SSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEA 615
           S I+  G +HEF+V D SHP+ +EI   L E+ +KL +AG+ P TTQVLL LEE+ +KE 
Sbjct: 563 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKEN 622

Query: 616 ELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREIIIRDGSRFH 675
            L  HSE++A AFGL++   G PIRI+KNLRIC DCH+  K IS +Y R+I +RD  RFH
Sbjct: 623 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 646

Query: 676 HFKSGSCSCKDFW 683
           HF+ GSCSC D+W
Sbjct: 683 HFQDGSCSCMDYW 646

BLAST of Carg04154 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 525.8 bits (1353), Expect = 5.2e-149
Identity = 264/681 (38.77%), Postives = 397/681 (58.30%), Query Frame = 0

Query: 4   SLTLSHSLQPFLPCNLHFPLQNCETEREAKQFHALSLKTGSLNHPSISPRLLALYANPRI 63
           S +L H+L   + C     LQ C  + E KQ HA  LKTG +       + L+   +   
Sbjct: 7   SFSLEHNLYETMSC-----LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 66

Query: 64  NN-LEYVQSLFDWIRKPTLVSWNMLIKCYIENQRSNDAIALFCKLLCEFMP-DSFTLPCV 123
           ++ L Y Q +FD   +P    WN++I+ +  +     ++ L+ ++LC   P +++T P +
Sbjct: 67  SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 126

Query: 124 LKGCARLSALQEGKQIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDV 183
           LK C+ LSA +E  QIH  I K+G   D + ++SL+N Y+  G  ++   +FDR+ + D 
Sbjct: 127 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDD 186

Query: 184 VSWNSLIDGYARCGEIELALELFDEMPEKDNFSWTILVDGLSKSGKLKAARDVFDRMPTR 243
           VSWNS+I GY + G++++AL LF +M EK                               
Sbjct: 187 VSWNSVIKGYVKAGKMDIALTLFRKMAEK------------------------------- 246

Query: 244 NSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVSWNSMITGYELNKQFTQALKLFEVML 303
           N++SW  MI GY++A                            ++NK   +AL+LF  M 
Sbjct: 247 NAISWTTMISGYVQA----------------------------DMNK---EALQLFHEMQ 306

Query: 304 TEDISPNHATLVGALSAASGLASLGNGRWVHSYIVKNRFKTDGVLGTSLIEMYSKCGSIK 363
             D+ P++ +L  ALSA + L +L  G+W+HSY+ K R + D VLG  LI+MY+KCG ++
Sbjct: 307 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEME 366

Query: 364 DALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACS 423
           +AL VF++I KK +  WTA+I G   HG   + +  F EM + G+KP+ ITF  VL ACS
Sbjct: 367 EALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACS 426

Query: 424 HAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDALCRAGYLEEARHTIERMPIKANYVIW 483
           + G  +E +  F +M  D+ ++P+IEHYGC++D L RAG L+EA+  I+ MP+K N VIW
Sbjct: 427 YTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 486

Query: 484 MSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCYVILSNMYAATGLWEKVRQVREMMKKK 543
            +LL   R H N  +GE     L+ + P   G YV  +N++A    W+K  + R +MK++
Sbjct: 487 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 546

Query: 544 GIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIYVKLHEMKEKLNVAGHIPDTTQVLLCL 603
           G+ K PGCS+I  +G+ HEF+ GDRSHP+ E+I  K   M+ KL   G++P+  ++LL L
Sbjct: 547 GVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDL 606

Query: 604 EEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKFISDIYNREII 663
            +D+E+EA +  HSE+LAI +GL+  K G+ IRI+KNLR+C DCH VTK IS IY R+I+
Sbjct: 607 VDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIV 620

Query: 664 IRDGSRFHHFKSGSCSCKDFW 683
           +RD +RFHHF+ G CSC D+W
Sbjct: 667 MRDRTRFHHFRDGKCSCGDYW 620

BLAST of Carg04154 vs. TAIR 10
Match: AT3G22690.2 (INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic process, photosystem I assembly, thylakoid membrane organization, RNA modification; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1). )

HSP 1 Score: 506.9 bits (1304), Expect = 2.5e-143
Identity = 260/707 (36.78%), Postives = 397/707 (56.15%), Query Frame = 0

Query: 21  FPLQNCETER---EAKQFHALSLKTGSLNHPSISPRLLALYANPRINNLEYVQSLFDWIR 80
           F L  C   R      Q H L +K G      +   L+  YA      L+  + +FD + 
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYA--ECGELDSARKVFDEMS 198

Query: 81  KPTLVSWNMLIKCYIENQRSNDAIALFCKLLC--EFMPDSFTLPCVLKGCARLSALQEGK 140
           +  +VSW  +I  Y     + DA+ LF +++   E  P+S T+ CV+  CA+L  L+ G+
Sbjct: 199 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 258

Query: 141 QIHGLILKIGIGMDKFVLSSLVNMYSKCGEIEMCRKVFDRMEDKDVVSWNSLIDGYARCG 200
           +++  I   GI ++  ++S+LV+MY KC  I++ +++FD     ++   N++   Y R G
Sbjct: 259 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQG 318

Query: 201 EIELALELFDEMPEKD-------------------NFSW--------------------T 260
               AL +F+ M +                     N  W                     
Sbjct: 319 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 378

Query: 261 ILVDGLSKSGKLKAARDVFDRMPTRNSVSWNAMIDGYMKAGKFNTARELFDWMPERNHVS 320
            L+D   K  +   A  +FDRM  +  V+WN+++ GY++ G+ + A E F+ MPE+N VS
Sbjct: 379 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 438

Query: 321 WNSMITGYELNKQFTQALKLF-EVMLTEDISPNHATLVGALSAASGLASLGNGRWVHSYI 380
           WN++I+G      F +A+++F  +   E ++ +  T++   SA   L +L   +W++ YI
Sbjct: 439 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 498

Query: 381 VKNRFKTDGVLGTSLIEMYSKCGSIKDALRVFQSIPKKKLGHWTAIIVGLGMHGLVEQTL 440
            KN  + D  LGT+L++M+S+CG  + A+ +F S+  + +  WTA I  + M G  E+ +
Sbjct: 499 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 558

Query: 441 ELFDEMCRTGLKPHAITFIGVLNACSHAGFAKEARRYFKTMTDDFGIEPSIEHYGCLIDA 500
           ELFD+M   GLKP  + F+G L ACSH G  ++ +  F +M    G+ P   HYGC++D 
Sbjct: 559 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 618

Query: 501 LCRAGYLEEARHTIERMPIKANYVIWMSLLSGSRKHGNTRMGEYAAHHLMDLAPDTTGCY 560
           L RAG LEEA   IE MP++ N VIW SLL+  R  GN  M  YAA  +  LAP+ TG Y
Sbjct: 619 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 678

Query: 561 VILSNMYAATGLWEKVRQVREMMKKKGIRKDPGCSSIEHQGSIHEFIVGDRSHPQTEEIY 620
           V+LSN+YA+ G W  + +VR  MK+KG+RK PG SSI+ +G  HEF  GD SHP+   I 
Sbjct: 679 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 738

Query: 621 VKLHEMKEKLNVAGHIPDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRI 680
             L E+ ++ +  GH+PD + VL+ ++E  EK   L  HSE+LA+A+GL++   G+ IRI
Sbjct: 739 AMLDEVSQRASHLGHVPDLSNVLMDVDE-KEKIFMLSRHSEKLAMAYGLISSNKGTTIRI 798

Query: 681 IKNLRICNDCHAVTKFISDIYNREIIIRDGSRFHHFKSGSCSCKDFW 683
           +KNLR+C+DCH+  KF S +YNREII+RD +RFH+ + G CSC DFW
Sbjct: 799 VKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7011869.10.0e+00100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6572234.10.0e+0098.68Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022953072.10.0e+0097.95pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... [more]
XP_022969015.10.0e+0097.21pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucur... [more]
XP_023554422.10.0e+0096.77pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Cucur... [more]
Match NameE-valueIdentityDescription
Q9LN015.4e-15941.34Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823809.3e-15938.89Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9FI801.3e-15542.94Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9FJY77.4e-14838.77Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9LUJ23.5e-14236.78Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1GM700.0e+0097.95pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like OS=Cuc... [more]
A0A6J1HYS60.0e+0097.21pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like OS=Cuc... [more]
A0A6J1C6D90.0e+0087.37pentatricopeptide repeat-containing protein At5g48910-like OS=Momordica charanti... [more]
A0A5D3D6Y70.0e+0087.96Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CG660.0e+0087.96pentatricopeptide repeat-containing protein At5g48910-like OS=Cucumis melo OX=36... [more]
Match NameE-valueIdentityDescription
AT1G08070.13.9e-16041.34Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.16.6e-16038.89Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.18.9e-15742.94Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G66520.15.2e-14938.77Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G22690.22.5e-14336.78INVOLVED IN: photosystem II assembly, regulation of chlorophyll biosynthetic pro... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 547..672
e-value: 2.0E-36
score: 124.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 182..210
e-value: 7.7E-10
score: 38.4
coord: 412..437
e-value: 0.44
score: 10.9
coord: 348..373
e-value: 0.042
score: 14.1
coord: 153..180
e-value: 1.9E-4
score: 21.5
coord: 82..108
e-value: 0.034
score: 14.4
coord: 275..304
e-value: 6.8E-5
score: 22.8
coord: 515..543
e-value: 0.073
score: 13.4
coord: 213..241
e-value: 1.7E-5
score: 24.7
coord: 377..405
e-value: 0.0016
score: 18.5
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 441..472
e-value: 3.5E-6
score: 26.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 378..408
e-value: 4.4E-5
score: 21.4
coord: 275..308
e-value: 8.3E-6
score: 23.7
coord: 449..475
e-value: 4.1E-4
score: 18.3
coord: 244..274
e-value: 1.8E-6
score: 25.7
coord: 182..210
e-value: 3.1E-8
score: 31.3
coord: 153..182
e-value: 4.6E-4
score: 18.2
coord: 82..108
e-value: 0.0012
score: 16.9
coord: 213..242
e-value: 1.6E-5
score: 22.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 242..273
e-value: 5.5E-9
score: 36.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 374..408
score: 9.876189
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 445..475
score: 8.582755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 180..214
score: 12.463056
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 149..179
score: 8.944478
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 242..276
score: 12.002681
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 327..425
e-value: 6.7E-19
score: 69.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 30..175
e-value: 4.9E-20
score: 74.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 176..240
e-value: 4.6E-19
score: 71.0
coord: 241..326
e-value: 2.9E-19
score: 71.7
coord: 426..608
e-value: 1.5E-16
score: 62.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 80..238
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 191..676
coord: 15..259
NoneNo IPR availablePANTHERPTHR47924:SF1SUBFAMILY NOT NAMEDcoord: 191..676
coord: 15..259

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg04154-RACarg04154-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding