Carg03746 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTAATTTGCCGGGTAACTTAATAGCTTGGGTAGTTAGGGCGTTGGTGTACGTACTACAACTCAAAGGTCGGTAGGTTCAAATCTGGCGCCGATCATTTTCTGAATTTTTTTTTTCTAACCCTTTTCGTTTAATCAATTTGGACGGTTTTGATCTTTATTTCCTTGGCTCAGATTGGGTCAGATTCATCGAAGGCGCCAGTTCGTCGGAGTTGCGATCGTCTTCTTCTATCTTTTTGTTAATCGATTCGAAAATGGTAAATCCCTCAATTTCTTGCGATTGGTAGCTTGAAATTTTCTTTTACGCTTGTTTTTCGTTGGATTAGGTTTGCTTGGCGTGTTTGTTGCCTCTGTTTCTCATACCAGTCGTCAACGCGCTGCCTCTTCTGTTCGATTTAATTATGGTACGCCCATATGATTCATTTCTCTTTTGGATCTCATCTTTTCGCCTGTTCATCAAATCGCCTCAAAGATTTCGGGTTTTCTGTGGTGTTGAAGGCAATTTTGATAATATTCGTCGTAATTTTCAGCTTTTTCTTTTGTTGTTTTTCTTGAATTTTCTCTTAGGGCAAAATTTATGGAATTTTTGGCTGGGAATACAGAAAACCACAGAGGGTACCGCCGGCTTGCCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGAGTGGTCTGCTATCGTTTTTACTCTATTTGTGTTGTCTATTGGTCTTTTGAAGAAGTAATACACGGAATGTTGGGGAAATGGATGAATTTTTGTTGAGAAATTGGATATGAATGGAGCGTGTGTTATGAAGTAGTTTAAGCTTTGATGGATTAATCTCTCTTGTGCATACGTCTGGCTCATACACTATGGTGACGGTGAGAAAGGATATATATTGCATCCTGGAGGGGCTATAATTGGAGATTCCATTTTTTGGTACAAAAGTTCCAATAGAAATAGGAAATACCCTACCTTTGAGTGCAGTTTGAACTATTGACTATGTAATTAGAAGTAACTAATTAGGTTTATGATGAAACCTAGAAATCGATCGTTAATCCACTTTGAGTACCTTCACATGATAAGACCTCAACAAAAAACCGAAGAGTAACGACATCAGGTGATTGTGTTCAGCAGTTCCTCATATAAAATTATTGACTCTAGAGATATTTTCGTTAATTGTTTTCTCAAAGAAGCCACTTTGATAGCTTGGGCATACTGAGGAGATTGCCAGGATTGTGCATCGTTACTTCATGTGACAACTAATAATGAATCATGATGTTGATTAAGTACGTGTGGCTAGTGTATTGCAATGCTAGGGTAGTGTCAAAAGAGCAATTACCTTACTTAGGAAAACTTCACTGAAGCAGAAGTTGAGAGAGACTCTTCTCTTTGTTATGCCCCACGTTGTCTCCTTGCTTGCTCTTCAGCTCTCCAAGAGGAAAACCCTCAAGTTTTCCTTCCGCCTTTTAAATCGTTGTTATTAATGGTTTTAGGACCTGCTAGAATCAATTTTTGTTAGTTGTAAACGAATAAATTAAAGATGACTTCTTTTGAATCGGATGACATCCCTCGATTTTTCTCCCCCGCCATTTTTCTCTTCTCTACCTTAAGCGTGATGATTTTGGGAGCACCATATCCTTTTTAGTTTATGTATATACTCGAGCTGCAGCAGACATCAGACATTTGTACTACCCTAAGATGAAAGTTCACATAACGATATGTGTTTTTATTTTCTTGTGTTAAACGAGAAGTGCCTTCGTTTTGTTTTGCTTGTGTTAGTATTTTGTATTTTGCTGTTCTTTTTTTTTTGTCGGACTTCCTGACAGCGGATATGTGTGTGTTCTACACTGCACCTATCGTCTAGTGGTTTAATTCTTAAGGTTTGCTCGTCTGGCTGGTTGAAGCAAGCTTTTTCTTAATCTTAATAGGTGGAGTTAGAACCTCTAGTCGGTCAGCAACTCCCACCTCCAAAAGTCGTGGATGCCGTGGATGAGAAGCAAGACTGAATCTGGAAATGTCTGATGTACATACCTGTCAGCAAGATCAACAGATGTTTGTGGCCCTAGAAGCTGTGGACACTGTCGATTTTAGGAAGCTATGATTTCCAATCGGGTCAGACAAAATATATATTTTAAACTCTCATCGCTAATACTATCAATACAGTTATTTGTCAGTGCATGCTTTCTGAATAACATCAATACAGACATCGTATGTATGCTTTCTGCATAATTTAGGTGGTTGGCTTGAATTTGTTTTCCTTACTTGTAGTTAATTAATGCTCGTGGAATCTCTGGGAAGAAAAAATAAAATAAATTAGGCCTAAAAAAAGGCTTAACTAACAGATGCCTACTAACTCTTTTGTTCCCAAAAGAAACTTTGGCTGCCTTATCTGCCTTCATGTTAACGACTAAGATAGTGTTGTTTGTTACCCTCCTTTATATATACATATGGCCCATTGAGTGTATAGATTGCTAATTATGTCCTTTGAATTCCAAAATAGAAAATTAGTGTTTTAACCATGGTGGGGACAAATACTTGAATAGCATATTGTACTGAGCTTCTTGCCAGCTGTAGAGTAGAAACTGAACGAAGTTGGTAGCAAAGCTGCATGACAAATCATGATAAGAGAAAATAGGATCTTATATTTGAAACCAGCGTCGAACAAGGATTAGATTGTAAAAGAAAAGAAAAGAAAAGATATTAGGGGAGGAATAGAGAACACCGCTTTCTAGAGGAGAAATAGAGAACACAGCCTATACATTCTTATCTTTGATTTTGTTGTTAAATAATATTAAGATATTATTATTATTATTTTGATCTGTGTGTTTATGGACCAATTTCTGTGCAACAAACATTTGGTTGTGAAGAATACTTTAAGGATATCAAATTGTAGGTAGATTATTTATTTATTTATTAAACTAACATGTGGGATGGGAGAATTGACCCCTTGATATCTGTTTTGATTGAGGGTATACATCTTAACTACTTGAGTTATATAAGTAGTTGGCGATTGTCACTGTGACTTGCTAAGCTTTTTATTATTTATATTAGCCTTTATTGATTATTAGGTTAATCTATAATGA TATTTAATTTGCCGGGTAACTTAATAGCTTGGGTAGTTAGGGCGTTGGTGTACGTACTACAACTCAAAGATTGGGTCAGATTCATCGAAGGCGCCAGTTCGTCGGAGTTGCGATCGTCTTCTTCTATCTTTTTGTTAATCGATTCGAAAATGGTTTGCTTGGCGTGTTTGTTGCCTCTGTTTCTCATACCAGTCGTCAACGCGCTGCCTCTTCTGTTCGATTTAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATACAGAAAACCACAGAGGGTACCGCCGGCTTGCCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGGAGTTAGAACCTCTAGTCGGTCAGCAACTCCCACCTCCAAAAGTCGTGGATGCCGTGGATGAGAAGCAAGACTGAATCTGGAAATGTCTGATGTACATACCTGTCAGCAAGATCAACAGATGTTTGTGGCCCTAGAAGCTGTGGACACTGTCGATTTTAGGAAGCTATGATTTCCAATCGGGTCAGACAAAATATATATTTTAAACTCTCATCGCTAATACTATCAATACAGTTATTTGTCAGTGCATGCTTTCTGAATAACATCAATACAGACATCGTATGTATGCTTTCTGCATAATTTAGGTGGTTGGCTTGAATTTGTTTTCCTTACTTGTAGTTAATTAATGCTCGTGGAATCTCTGGGAAGAAAAAATAAAATAAATTAGGCCTAAAAAAAGGCTTAACTAACAGATGCCTACTAACTCTTTTGTTCCCAAAAGAAACTTTGGCTGCCTTATCTGCCTTCATGTTAACGACTAAGATAGTGTTGTTTGTTACCCTCCTTTATATATACATATGGCCCATTGAGTGTATAGATTGCTAATTATGTCCTTTGAATTCCAAAATAGAAAATTAGTGTTTTAACCATGGTGGGGACAAATACTTGAATAGCATATTGTACTGAGCTTCTTGCCAGCTGTAGAGTAGAAACTGAACGAAGTTGGTAGCAAAGCTGCATGACAAATCATGATAAGAGAAAATAGGATCTTATATTTGAAACCAGCGTCGAACAAGGATTAGATTGTAAAAGAAAAGAAAAGAAAAGATATTAGGGGAGGAATAGAGAACACCGCTTTCTAGAGGAGAAATAGAGAACACAGCCTATACATTCTTATCTTTGATTTTGTTGTTAAATAATATTAAGATATTATTATTATTATTTTGATCTGTGTGTTTATGGACCAATTTCTGTGCAACAAACATTTGGTTGTGAAGAATACTTTAAGGATATCAAATTGTAGGTAGATTATTTATTTATTTATTAAACTAACATGTGGGATGGGAGAATTGACCCCTTGATATCTGTTTTGATTGAGGGTATACATCTTAACTACTTGAGTTATATAAGTAGTTGGCGATTGTCACTGTGACTTGCTAAGCTTTTTATTATTTATATTAGCCTTTATTGATTATTAGGTTAATCTATAATGA ATGGTTTGCTTGGCGTGTTTGTTGCCTCTGTTTCTCATACCAGTCGTCAACGCGCTGCCTCTTCTGTTCGATTTAATTATGGGCAAAATTTATGGAATTTTTGGCTGGGAATACAGAAAACCACAGAGGGTACCGCCGGCTTGCCCCTATCGCCCTGCTGCCAAACAAAATAGCAATGTGGAGTTAGAACCTCTAGTCGGTCAGCAACTCCCACCTCCAAAAGTCGTGGATGCCGTGGATGAGAAGCAAGACTGA MVCLACLLPLFLIPVVNALPLLFDLIMGKIYGIFGWEYRKPQRVPPACPYRPAAKQNSNVELEPLVGQQLPPPKVVDAVDEKQD Homology
BLAST of Carg03746 vs. NCBI nr
Match: KAG6580623.1 (putative xyloglucan endotransglucosylase/hydrolase protein 32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 170.2 bits (430), Expect = 7.4e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Carg03746 vs. NCBI nr
Match: KAG7017382.1 (hypothetical protein SDJN02_19247 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 170.2 bits (430), Expect = 7.4e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Carg03746 vs. NCBI nr
Match: XP_022935583.1 (uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata] >XP_022935584.1 uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata] >XP_022935587.1 uncharacterized protein LOC111442415 isoform X1 [Cucurbita moschata]) HSP 1 Score: 161.0 bits (406), Expect = 4.5e-36 Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Carg03746 vs. NCBI nr
Match: XP_038903023.1 (uncharacterized protein LOC120089725 [Benincasa hispida]) HSP 1 Score: 157.1 bits (396), Expect = 6.5e-35 Identity = 77/84 (91.67%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Carg03746 vs. NCBI nr
Match: XP_022983172.1 (uncharacterized protein LOC111481805 [Cucurbita maxima]) HSP 1 Score: 156.8 bits (395), Expect = 8.4e-35 Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Carg03746 vs. ExPASy TrEMBL
Match: A0A6J1F5U6 (uncharacterized protein LOC111442415 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442415 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36 Identity = 78/84 (92.86%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Carg03746 vs. ExPASy TrEMBL
Match: A0A6J1IYJ1 (uncharacterized protein LOC111481805 OS=Cucurbita maxima OX=3661 GN=LOC111481805 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 79/84 (94.05%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Carg03746 vs. ExPASy TrEMBL
Match: A0A0A0LB44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G741830 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 5.9e-34 Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Carg03746 vs. ExPASy TrEMBL
Match: A0A1S3B744 (uncharacterized protein LOC103486509 OS=Cucumis melo OX=3656 GN=LOC103486509 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 5.9e-34 Identity = 75/84 (89.29%), Postives = 79/84 (94.05%), Query Frame = 0
BLAST of Carg03746 vs. ExPASy TrEMBL
Match: A0A6J1CU80 (uncharacterized protein LOC111014385 OS=Momordica charantia OX=3673 GN=LOC111014385 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32 Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 0
BLAST of Carg03746 vs. TAIR 10
Match: AT5G03460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 81.3 bits (199), Expect = 4.2e-16 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|