Carg03462 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCAGGGAAAATCCGAATGAGCAATTTAGCGGGAGTGTCAGCTGAACTCACACATACTTCGATATCAAGGTATATTTTTATATACTACCAATTATGTCAAAGGCCGGGGAAATTATAACCTTCGTAATTCCTTCTTTTATCCCAGCAGATACGACGTAGCGTAAAGCCTCCAATACTTTTCTAAGAGCCATCGTGTAGTCTTGCCCTTCTGTAAGCGAAACAGAAACCACATCATAAAATTCAATGATATCAAGCTAACGGAAAATCAAATCCATAGCGCCTTGCTCATCGAGGTTTCTATCGAAATAGGAACGAATTCTGATGTTACCAATTACCTTCGGTAATGCTCATTACCAAAAAACCCCTTATAGCGTGAACTTATGCACAGAATACAACATAACATTCAACTTCATAAGCAGTCCCAATTTCAGACATCGCCTCACCATTGTAATGAAAAGCAGAGTTCACTTTATATAATAAGGAAATCGGCTTCCAACGATTTCCTTACTCTGGCGAGGAAGTAGACTCACCTTGATCCTTCCGTGTAGTCCTCAGAAAAGAAGAATCTTTGAGCTTTATTCAATGTGATCTGACTGGGTGGTATAGCTATGAATGTTTATTAAGTTGACTGTCTCAAGAATTCAGGATAGATGCTTGTTCTCTTCTTTAACTCTCTTAACATTTTTCTTAGGTTTTCCTATTCTACTTCCTGTGCATGTTTCAACTGTCAGTCCACTCACTTAACTTCCTAACGAATTCTTGACTCATGAACAATCCAATTAACTGGCACCAATAGGTATAACAGTTAATGTGTTGCTAATTACTCTTCCTCTGTTCTGCCTAATCTATGTAAAATGTACGGGTACCCTAGTATGCTCATTAATACTTTGTCCAAACTTTTACAAGAACGAGCTCCAATTCAAGTAACCTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGAAGGTTAAATTTCTAAGAAAGTGAAGTTTTTTTTCTTTCCAAGTCTTACATGGAAGAGTGAACACCCAAGATCGCATCTAGCAGCACTCTACCTTGGTTTTACGCCCGCAATGGTGTGTTCTTTGTAGAAAACATGAGGGATCTTGATATCACTTATGAGGTTGCCAGTTTGCTTACTCCCTTTGGAATCGGTGCTTCAGTTTGTTTGGGGTTCCTGTGGTGTGTAATAGGGACTTATGGCCTTTGTTTGAGGAAAGTGTGATGAACTTTTTGTTTCGTGTTAAGGGGAGGTCTTGTGGCAGACTTACTGTTTTGCAATCTTGTAGAGCATGTGGATTGAGAGAAATATAAGAATTCTTGGAGGGATGGAGAGGTCTTTAGACAAGGTTTTGGAAGGATGATGTTTGATAAAGGGCATTTGGTAGGCCTATTCTCTCTAACTCTCATAATTTTGACTATCTTCTTCTCAGCCTCTTGTACACACAACGACTGCCAGTCTCCTCAGTTAACTTCCTGACCGAGGGAATTTACTAACAGCCTCTCAACTTACATCAACCAGCTATAAAAGGCAGTTAGCTACTTAACTAGTCTTCTCTCGCTATGCCTAGCATCATTTATCTATCTAGGTGACATAGTTTTCCCATCATCCTCAGACATTTCTAATATGATTACCACTTATGATTACAGTTGTATATAATCATTACAATTTTTTCAAGGCATCCTTCTTTGCTTTGAATCATTTGAGCACAATGGTTTTCAGGTTTACTTATTGATGGTTTATTCTTAAATATATTTACCAAATGTTATTTGTTAGGTGTACTTGAAGTGTGATTATGTGTATAAGGTTTTTTCTTTTGTGTATTAGGTCTTTCTTCTACTTAAGATAGACCCTTGTAACTATTGTAAAAGTGAGAGAATTATTATCCGACTTTTACCTTGAAAATTAGTAACTTATTGTTTTCATTCTTTCACTAAGAAACTATTTACTGAAATTTGTATGCAGACTACGAGATTGGAGGAAAGCAACTGACATAATAAAGCTTATGGAGCCCTCTTTGCATCTTGTCTCAGTTGGAACTATTAATCATCTTCTGCATTTTCTGGGAAAAAGTGGAAAGATGGAGATTATGATGAAGGTAGTTGGAAAATATAAGTGTCGATATATTTCTTATGGGTTAATGGTGGGAATCAAGCAAATTTTTCTACACATTCTTTTACTTCAAAATTTCCCCTGTTTCCTTATCGTTTAAAGTCTGATATCTATGAACATGATTTACATATGCCAACTGTTTGTATCCTTGTAATGCGTTGAACTCTAAGCTATTTTATCCCAAAATACAGCTGTTTTACAGATTCGTGGCATTGGGATCCAGTGTCAATATTAGTACTTATTCAATCTTGTTGAAGAATCTCTTGTCTTTTGGAAATTGGAGGAAATACATTGAGGTACGCTTTATGTTTCAGTAACTTGGCATTTCAAAGCCCTTGAGCTGTTCTTACTAATATATACCTATGACTGCTGATTATAGGAGTTGTATATTACTTGGACATTAGTTGTCCTATGTTTTTTTTTTTTCCTGATACCTCGGTGCTAATACTAAAGCAACTTTGAGCAAGCCTAGACAATGGAGCAGTACCATATTAGTCTTTGTCTATACATGATAGTCCAAATTCTTTTGAATCTTTAGTTAAGATGCCAAGAGTCCTGATTTCTAGAGCAGGATACAACGTTTGAATGTCTTATGCAAGTTTATGTTGGATGAGTCTGTTTGTCATTGATCAATCAAGTTCCTGAATCAAGGAAGAATTAGAGAGCTTTCCGTTGCTACTTATTACCACTCTCTCTCTGACTGACTATAGCAAAAACGCCCCTCCTAGCTCATTACGAATTCCATACCATGTTACTGTCTCTTTTCTTCAGTTCCTTGTTTTTAGTCTGTGGAGTTTGGTACAATTTTGGTTCGTACTTTTACCCTTTCATTAAATTTTTGCTTTCTATTAAATAACATGGCTTTTTTAAGTGTTTTCATCATATTCCCAGCCAGGAATATAGAAATTTAAATAAACTTATGTACAGGTCTTGCAGTGGATGGATGATGCTGGAATCCAACCCTCTAATGCAATGTACAATGACATACTTTACTTCGCACAAAATTGTGGTGGTGCAGAGTGCGCTGCTATCATCAAGGAAAGAGTTGGTATGTTGGTTGTGTGTATTTCTGCTATTATAATTGTTATTTTAGCGAGAAACCATACTCATACATGAGGTACCAGTTGCATATCGTTTACCTAATAAAAATATTTCTGAACTTTCAAAAGTTTTAATGATACCCTTATACTTTAAAAAAAAATCAAAAGTACATTTACCGTTATTTTTAGAGGGACCATCAATATTCTATTTCAAAAATACCTTTGAACTTTCAAATCATTAATACTCTTAAAAAAGTTCGAAATACCATCGAACTCTCAACAATTTTATTATTGTTCTTTAAAACTTTTTTAATAATGTTAAAATATACCCTTAACCTTTAAGAGTTTCATTAGTTTAAGAAATTTTACACCTAAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGTTATCTGGGAAAGAACCAACTTGCAAATAAACAAAGGATAGTTGTTGAACCTAGCCATAGTCCAAAACTCCTCAACACATCTCTACCCCACTAAAAGTCTTCTTGCTCCTCTGAAGCTAAATGCTCCACAAACTAATGAAAATGATTTCCCTCTGCAAGGCACCAACTCCTTATGAGTTAAAAACAACTTTTGGTGAACTTATGATGGAGCAGGAGGATGTTACCCTATTTAGAAATTTAGTAGAGAGAAAATAAGACAAATAGATATGTAATTTATTATCTCATGCTGGTGTATAAGGTTAGCTTGTTACTGTAATTTTCAGTCATTTCAGGTTGAGTTGAGTTGTACTCTTTGAACTGTTAGAAAGTTTCATTTAGTTTCATTATATTGTTATCGTTTTTCGATCTGGTAGTGATCTCTTGCACCATAAAATCCCATGCAGAATCCCTGAAAAGATAGCATGGAGCAAACTCTGCATTCACATCCTTCCATTTTATCCACACAAGGTGTTAATATGTGTCTACCCTCTATGCGGATGCAGCAGTCCGCTTGAAAGGCTCTCATTGAAAGATCCACTGAGGTGATTTAGCCACCAAAGTTTCTTGTCCGCATTTATCCAAAGATGGTACAGTCTAACACTTCCTTGTATAGCTCAAGTGGGAAGGGATTGGTGGCACGAGAACTTTGAATCCTCATTGATTGTTTGTAATGTATGTCACTTCCTTGTATAGCTCAAGTGGGAAGGGATTGGTGGCACGAGAACTTTGAATCCTCATTGATTGTTTGTAATGTATGTGGGATGAAAATCCCACCTCAGATAATTACTATCTATCTTTATTGATACGAGGCCTTTTGGGGAAAAGCCCAAAGCAAAGCTATGAGAGCTTATGCTCAAAATGAACAATATCATACCATTGTGAAAAGTTGTGTTCATCTAACTATGTAAACTTATAAT ATTCAGGGAAAATCCGAATGAGCAATTTAGCGGGAGTGTCAGCTGAACTCACACATACTTCGATATCAAGACTACGAGATTGGAGGAAAGCAACTGACATAATAAAGCTTATGGAGCCCTCTTTGCATCTTGTCTCAGTTGGAACTATTAATCATCTTCTGCATTTTCTGGGAAAAAGTGGAAAGATGGAGATTATGATGAAGCTGTTTTACAGATTCGTGGCATTGGGATCCAGTGTCAATATTAGTACTTATTCAATCTTGTTGAAGAATCTCTTGTCTTTTGGAAATTGGAGGAAATACATTGAGGTCTTGCAGTGGATGGATGATGCTGGAATCCAACCCTCTAATGCAATGTACAATGACATACTTTACTTCGCACAAAATTGTGGTGGTGCAGAGTGCGCTGCTATCATCAAGGAAAGAGTTGAATCCCTGAAAAGATAGCATGGAGCAAACTCTGCATTCACATCCTTCCATTTTATCCACACAAGGTGTTAATATGTGTCTACCCTCTATGCGGATGCAGCAGTCCGCTTGAAAGGCTCTCATTGAAAGATCCACTGAGGTGATTTAGCCACCAAAGTTTCTTGTCCGCATTTATCCAAAGATGGTACAGTCTAACACTTCCTTGTATAGCTCAAGTGGGAAGGGATTGGTGGCACGAGAACTTTGAATCCTCATTGATTGTTTGTAATGTATGTCACTTCCTTGTATAGCTCAAGTGGGAAGGGATTGGTGGCACGAGAACTTTGAATCCTCATTGATTGTTTGTAATGTATGTGGGATGAAAATCCCACCTCAGATAATTACTATCTATCTTTATTGATACGAGGCCTTTTGGGGAAAAGCCCAAAGCAAAGCTATGAGAGCTTATGCTCAAAATGAACAATATCATACCATTGTGAAAAGTTGTGTTCATCTAACTATGTAAACTTATAAT ATGAGCAATTTAGCGGGAGTGTCAGCTGAACTCACACATACTTCGATATCAAGACTACGAGATTGGAGGAAAGCAACTGACATAATAAAGCTTATGGAGCCCTCTTTGCATCTTGTCTCAGTTGGAACTATTAATCATCTTCTGCATTTTCTGGGAAAAAGTGGAAAGATGGAGATTATGATGAAGCTGTTTTACAGATTCGTGGCATTGGGATCCAGTGTCAATATTAGTACTTATTCAATCTTGTTGAAGAATCTCTTGTCTTTTGGAAATTGGAGGAAATACATTGAGGTCTTGCAGTGGATGGATGATGCTGGAATCCAACCCTCTAATGCAATGTACAATGACATACTTTACTTCGCACAAAATTGTGGTGGTGCAGAGTGCGCTGCTATCATCAAGGAAAGAGTTGAATCCCTGAAAAGATAG MSNLAGVSAELTHTSISRLRDWRKATDIIKLMEPSLHLVSVGTINHLLHFLGKSGKMEIMMKLFYRFVALGSSVNISTYSILLKNLLSFGNWRKYIEVLQWMDDAGIQPSNAMYNDILYFAQNCGGAECAAIIKERVESLKR Homology
BLAST of Carg03462 vs. NCBI nr
Match: KAG7017664.1 (Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 284.6 bits (727), Expect = 4.5e-73 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of Carg03462 vs. NCBI nr
Match: KAG6580916.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63 Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of Carg03462 vs. NCBI nr
Match: XP_022934373.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita moschata]) HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63 Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of Carg03462 vs. NCBI nr
Match: XP_022983707.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 [Cucurbita maxima]) HSP 1 Score: 253.4 bits (646), Expect = 1.1e-63 Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of Carg03462 vs. NCBI nr
Match: XP_023526155.1 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252.3 bits (643), Expect = 2.5e-63 Identity = 124/129 (96.12%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy Swiss-Prot
Match: Q8RWS8 (Pentatricopeptide repeat-containing protein At2g41720 OS=Arabidopsis thaliana OX=3702 GN=EMB2654 PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-35 Identity = 65/128 (50.78%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy Swiss-Prot
Match: Q9S7R4 (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OTP43 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 29/102 (28.43%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy TrEMBL
Match: A0A6J1J042 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.4e-64 Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy TrEMBL
Match: A0A6J1F7H2 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441562 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 5.4e-64 Identity = 125/129 (96.90%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy TrEMBL
Match: A0A6J1J354 (pentatricopeptide repeat-containing protein At2g41720 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61 Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy TrEMBL
Match: A0A6J1J8H8 (pentatricopeptide repeat-containing protein At2g41720 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482245 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61 Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Carg03462 vs. ExPASy TrEMBL
Match: A0A6J1F2E1 (pentatricopeptide repeat-containing protein At2g41720 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441562 PE=4 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 3.3e-61 Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of Carg03462 vs. TAIR 10
Match: AT2G41720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 149.4 bits (376), Expect = 2.1e-36 Identity = 65/128 (50.78%), Postives = 97/128 (75.78%), Query Frame = 0
BLAST of Carg03462 vs. TAIR 10
Match: AT2G41720.2 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 144.4 bits (363), Expect = 6.8e-35 Identity = 62/128 (48.44%), Postives = 95/128 (74.22%), Query Frame = 0
BLAST of Carg03462 vs. TAIR 10
Match: AT1G74900.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 29/102 (28.43%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of Carg03462 vs. TAIR 10
Match: AT1G10910.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 30/106 (28.30%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of Carg03462 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 23/73 (31.51%), Postives = 40/73 (54.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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