Carg02914 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02914
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr09: 2407142 .. 2409233 (+)
RNA-Seq ExpressionCarg02914
SyntenyCarg02914
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCGTATGTCTTTCTCCAGCCTGGATTTGAGACAATTTGTCAGTTAGATTAGTTCTGAGCTGAACATTCCAAGTCCTTTTAATTTCATATGTAAGTAGCATGAAAATGAATTTTTAATTTTTGAAATCTTTACTATCAAATAATCTACTTCCGTTATACATTGAAGTGCAAGCAACATGTTACCTTGAGAAAAGTTCACTAACACGCCTTAGTCGCCAGAACCGAAGTAAGTTGAGGAAACCGAAGACCTCATTGCGGTTCATCTTTCCAGTGAAAATTCTGTATATTACCTGAAATGGAAGAGTGGAGGCTACGTCCATGGGGAACCACAGGCTCGTAAGGTAACTGTAACAACACATAATTTTCTATTAATCTAATAGCTGTTCTGAAATTTGCTTCAGTAATTCATTTCGCACTGCAAATAGTTAGCTCTAACCATTCACCCAAGTCATATTTGTATATATATTTTCTACCGATTACAATTTACAACCTATCAAATTCAAGTTGTCACGATAAATCTTAGATCAAAAGATTAGAGGTTTGAATCTTTCAACCGCTTATTGTATTAAAAACAATTTTTTTTTCGTCAGAAAAGTAATCATATTGTTTTAATGCCTTCTAGTTACAACTTCTACATGTGTGCAGTTGTCGTCTTGTGCTAAATTGTCATTTATTGTATAACTGTACTGTTTCCCCTTCCTTCAGCTCTTGAAACCACTTTTGAAAATTTCAATTTTCAGAAGAAGTAGATGGAAGAACAAACCCAAACCAAAACATTACTTGGAATGGGCAAAATGAACATACCGTACAGCAATCTTCTTATGATCATCAACGAGGAGATAAGTGGATTTATCCAAATAAGCCACGAAGAAGGTCAAGACAATATCAAGGGCAAAGAATGCATCCACCACCAAATCAACGGGTAAAAGAGACCCAGTTGCCACTTTCTTGAAGGCAAGCTCAAAGGGAGATACCCACGCTGAGTACACCACAAGCACTACCAGGAAAGTTTGCCACCACCTGCATTGCATCATCATTCATATTCCAAAATGCCCAACCAAAGTGGTCCGCTCCTTTCTCTCGCCAAAAGCAAGTAAGACAAATTCTTGCTTTTGACTTGTTTTTCAAATTCTAATTTTTCATATATCAATACTTCTTATAAAAAAAATCATTTATACTGTATGTGTTCTTTCATTTACAGCTAATGAAATTCATCCTCATATATGGCAAGAAAAAAAAAAAAAAAAAAATTCAATACTGAATATCATGGATCACAGACCTATCACACAATCGGTAGGATCAAATTTATTAGCAGAGAAACTAAGCACTAAGATATGAAAGTACTTATGGTGTGTCAAATTTAAACTATATTGTCTCTTAGAATTGCATCTACAAGTTGTTGAATTGACTCACCGATATCTTCTATCATACGGAACTATAATGAACTTGTTCAGGTTTGAGTATCCATCGGTCACAACAGTTCCAAACGCCGGCAAAAGGCTGCTGGAAACCGACGTCAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGCAACGGCGACCTTGTTTCGGACATTGGTGTCGTCATTGTGTTTCAGCCTCTGCAAATTCTAATGACCCAGAAACAAGACGGTCACTTTTCATGCATGCCTGAGACTTTTTATGCACACAAAAGAGGTAACTTCTACGCGAAGCCCGTGAGTTCAACTTAATATATATTAATTAAAGGGGAAGGTGGCTATGAGCATTCGTTGAATTGGTGTAAATAAATTTAAAAAAGATCATTTCGTGACTGTTATACATCAAAGATAAGATTTATTTTAGTGATCCATGTTGACTTGCATTATTCTATGAATCGATCCCATGCTCAAGAGATGATGTCTCATAATTACTCTAATAATTGCGATTTTTATATGTAATATGCGTGTATTGTGAAGAGTTGACTCTTAATTTCAGGACTTCATCAGGGGAGAGGACTTTAAGGAAGGCTTTGTGGATCTCTTTTACCATCATTAAACATATGGTTAGTTTCTTGTTTCTTTGAATGAACCAGGTTCTCCTATACATTATTTATATATATA

mRNA sequence

AAGCGTATGTCTTTCTCCAGCCTGGATAAAAGTTCACTAACACGCCTTAGTCGCCAGAACCGAAGTAAGTTGAGGAAACCGAAGACCTCATTGCGGTTCATCTTTCCAGTGAAAATTCTGTATATTACCTGAAATGGAAGAGTGGAGGCTACGTCCATGGGGAACCACAGGCTCGTAAGAAGAAGTAGATGGAAGAACAAACCCAAACCAAAACATTACTTGGAATGGGCAAAATGAACATACCGTACAGCAATCTTCTTATGATCATCAACGAGGAGATAAGTGGATTTATCCAAATAAGCCACGAAGAAGGTCAAGACAATATCAAGGGCAAAGAATGCATCCACCACCAAATCAACGGGTAAAAGAGACCCAGTTGCCACTTTCTTGAAGGCAAGCTCAAAGGGAGATACCCACGCTGAGTACACCACAAGCACTACCAGGAAAGTTTGCCACCACCTGCATTGCATCATCATTCATATTCCAAAATGCCCAACCAAAGTGGTCCGCTCCTTTCTCTCGCCAAAAGCAAGTTTGAGTATCCATCGGTCACAACAGTTCCAAACGCCGGCAAAAGGCTGCTGGAAACCGACGTCAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGCAACGGCGACCTTGTTTCGGACATTGGTGTCGTCATTGTGTTTCAGCCTCTGCAAATTCTAATGACCCAGAAACAAGACGGTCACTTTTCATGCATGCCTGAGACTTTTTATGCACACAAAAGAGGACTTCATCAGGGGAGAGGACTTTAAGGAAGGCTTTGTGGATCTCTTTTACCATCATTAAACATATGGTTAGTTTCTTGTTTCTTTGAATGAACCAGGTTCTCCTATACATTATTTATATATATA

Coding sequence (CDS)

ATGCCCAACCAAAGTGGTCCGCTCCTTTCTCTCGCCAAAAGCAAGTTTGAGTATCCATCGGTCACAACAGTTCCAAACGCCGGCAAAAGGCTGCTGGAAACCGACGTCAAGTTCTTTATTTCGCCACTTGAGTGCCGCCGGAACAGCAAAGGCAACGGCGACCTTGTTTCGGACATTGGTGTCGTCATTGTGTTTCAGCCTCTGCAAATTCTAATGACCCAGAAACAAGACGGTCACTTTTCATGCATGCCTGAGACTTTTTATGCACACAAAAGAGGACTTCATCAGGGGAGAGGACTTTAA

Protein sequence

MPNQSGPLLSLAKSKFEYPSVTTVPNAGKRLLETDVKFFISPLECRRNSKGNGDLVSDIGVVIVFQPLQILMTQKQDGHFSCMPETFYAHKRGLHQGRGL
Homology
[Close]
BLAST of Carg02914 vs. NCBI nr
Match: KAG6591598.1 (hypothetical protein SDJN03_13944, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024490.1 hypothetical protein SDJN02_13306 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.1 bits (536), Expect = 4.5e-51
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0 

Query: 1   MPNQSGPLLSLAKSKFEYPSVTTVPNAGKRLLETDVKFFISPLECRRNSKGNGDLVSDIG 60
           MPNQSGPLLSLAKSKFEYPSVTTVPNAGKRLLETDVKFFISPLECRRNSKGNGDLVSDIG
Sbjct: 1   MPNQSGPLLSLAKSKFEYPSVTTVPNAGKRLLETDVKFFISPLECRRNSKGNGDLVSDIG 60

Query: 61  VVIVFQPLQILMTQKQDGHFSCMPETFYAHKRGLHQGRGL 101
           VVIVFQPLQILMTQKQDGHFSCMPETFYAHKRGLHQGRGL
Sbjct: 61  VVIVFQPLQILMTQKQDGHFSCMPETFYAHKRGLHQGRGL 100

The following BLAST results are available for this feature:
BLAST of Carg02914 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591598.14.5e-51100.00hypothetical protein SDJN03_13944, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Carg02914 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02914 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02914 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02914-RACarg02914-RAmRNA