Carg02689 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02689
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type domain-containing protein
Location	Carg_Chr02: 7394420 .. 7397382 (+)
RNA-Seq Expression	Carg02689
Synteny	Carg02689

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTTCTGATTTTATTTGCAGAGAACTCTTCTGGATCGCCATTAGAGAATATTCTCGAGCATCTTTTTTTTCTTCTCTTTTGCTTCAGAATAATTCTTCAGCATCTCCTTTCATTTCAAGTTTCGATTTCTGCTGAATAACTGTTGTTCTGGGTTCTGTGTGATCTAATTTATAAAGCGAGAAGAATCGGAGGTGAAACCCTCGTGTTCTCGCCATGGCTTCCTCTGGAATCTCTACTGAAAGCGCTGAATTGTCTGATGCCGTTCAAATACTGGAAGTTTGCAACCAGGTTTTAATCTAGTTTTTCACTTTTGAAGTTGTTACACTTTCTTGCGTAAAACTTGGCGCGAGAAATGGTTATTTTTTGTGTTGAGAGTTCGAATTGGAAGTATCGTTGATCTAATCTTGTTTTCTAGATTTTCGCTGGTGAAGGACTAATTGAAGTGTCATCGTCGGTTTAGTCTTGTTTTATTTCATTTTCAAGATTTTCGGGGCGTCGATAAGCGTATTTCTGCTTTTTAATATCAAGGAAGTACGTGGTCTAAATGAATGGATTTGATGAGCGTGTTTTTTTTCTTTTACTCTGAAGATCCGTAGGAAGCGGGAGCTATTGTTAACATTCATTGATTTCCGTTATCCGATTGCCTGCTAATAGATCACCGTTGTTTTCAAATTGTGAATGGTCACCTGCGCATGCTATTTTATTTTCCAATGAAAGTTCTTAATTCTTGCCCTTGGTGTGGCATATTATTGAAGTGTCTCTTTTCAAACATTAGTCATTTGCATAAATATATTTTGAGGATTGCTAAGTTGCTGAACTTCTCTGTTCAGATCGAAATGGGAAAGAAGGTAGAGATTCAAGGAACAGGTCATGGGAGTCATGATGGGGTTTGTGCAATATGCTTAAATAAGATAGCTCTCCAAGAAACTGCCTTAGTGAGGGGTTGCGAGCATGCCTATTGGTTTGTTCTTATTGATTAATCTTTCATCTATCTATTAATAGTTTCTATAGCACGACTTTCATATGCTATACATTAGGTAATTTGTTGATCCGTTCCTTTTCTGTATTTTGTATGGGAATCTTTTTTGCAGTCAAATGTTGACGTTCTATAGATGGTGCAATTCTTATGCTGCATTTATCATATATATTTCATTTCATTGTGGTTCTATGCTTGAATTGGAGTTGGAGTCTTAAGATCTTGCGAACATATTCCTGGGACTCCGCTAAACTTTATAGGAGAAAATTCATTGTATCCATATTGCTATTGGTACAATGTTTCTAATTGTGCTTCAGGTTGCTGGGATTTAATGGAAGAGGTATGCTATTTTAGATTTATAGCCCAAGTATCTTGGAGTCGGAGGAAATGTATGGTTCAGAGTCTGATGGTTAATCTGTTAATTCTCGTCTTATTTAGTATGTTAATAATTAATTATTGATTATTGAAGTTAGAATGCTTGCTTGGTGAGACTGGGATAGAAACCTGTTGTACTCGGTACTCAGTGACTTATTGTGAGCCTATGAATCTCATAGTTGTCGGCTTTGGTAACGTGTTCCTATTCTACGTAGGGTTGGATACTTGTTAAATCGGACAAATATCAAACACTGTGTTGAACATTTATGGATTTCAATAGACCTGAATCAGACGCATATTGAACAATTATTAGGCATTTGAACTAAGTGTTGAAACATATGTTGAACAAGGCTGGGATGTTTAGAAAATGTCAATGTCCGTGCTAGTGTCTATGCTTCTTTGTCATTAGCCGATTACTCTTTCATCACCTCCAAATTGTCATCACATACTCGATGCTTTTGGTGTCTGTTGCAAAGTTATGTTTTATTACTTGGTGTGGGGAACATTTCCCCTATGACTATTGCATTTAGTTTTCACTTTCAGCTTAGGAACTTATCAGTAATAATTAAACCAAACAAAAAATGAAGTGGCAAATGGTTAAGTGAATTGTCTATTGTTTTCCAACCACTGAAGCATTACAAATATTTTCCTTGCTTTTTTTGAGGAATAGTGTGATCTTTTACGGTTTATACACATGGGCATTATATTCTTTCATTAATGCATTGTTTTACTTTCATGAAGTGCGACTTGCATCCTTCGATGGGCCTCATATAATAAGAATCCGACATGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTGCATCGTTCTCTTGATGGGAGGTATGCCCCTCCATCATTCTATGGACCTTTTATAGTTTAGAGTCGCAGTATCATTTTAAATTAATGTTCTTCTCTATCCATTTATTGTCTGCGTATTGTAGCGTCCATGACTTTATGTTTGAGGAGAGCGTATGCCTACTTCTGAGAGCTTCATGGTATATACCTCTGATCGTTGAAGATCGGGAAGAAACCTATGAAGATCCTGATGAGTACTACCCTTACGAGGATGATGACGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCGTCGAGTCTCCGCATCGGCAATCGAAGGTGGGGAGACAATGGATATGTGAGGGGAGGTCGACAAGAAGCACGACCAGTTATTAGGTCAACTGTTCCAGTGCATGCAGGAGCTAGTTCATCACGTGAGCCTACAAAAAAAGATGCTTCCAAAGATAAAACCGGTCGACGAGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCTGCCGCAGCTAAACATCAGGAACATCTAGCTAGGTTTGGGCGGAAGTGATTCAAGTTCCTGTATATAACAAGCCTTGCGCTTAGACCCTGTGTACAGTTCTAAGATTCAATTTACTTTCACAGTTGGAAGTACCTTACCTCCCCTGAGCCTGGTGGCTCCCCAATTAAATCTATGGTGGGGATTATACTTGCATGGTATAAAGGACACCCCAATGAGTTCTTTGTATGAACATTGAATCTCAAAATCAATCATAGAACAATTGTTATGGTCAGATTTTCTGTTCTTTTTTAG

mRNA sequence

AACTTCTGATTTTATTTGCAGAGAACTCTTCTGGATCGCCATTAGAGAATATTCTCGAGCATCTTTTTTTTCTTCTCTTTTGCTTCAGAATAATTCTTCAGCATCTCCTTTCATTTCAAGTTTCGATTTCTGCTGAATAACTGTTGTTCTGGGTTCTGTGTGATCTAATTTATAAAGCGAGAAGAATCGGAGGTGAAACCCTCGTGTTCTCGCCATGGCTTCCTCTGGAATCTCTACTGAAAGCGCTGAATTGTCTGATGCCGTTCAAATACTGGAAGTTTGCAACCAGATCGAAATGGGAAAGAAGGTAGAGATTCAAGGAACAGGTCATGGGAGTCATGATGGGGTTTGTGCAATATGCTTAAATAAGATAGCTCTCCAAGAAACTGCCTTAGTGAGGGGTTGCGAGCATGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATATAATAAGAATCCGACATGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTGCATCGTTCTCTTGATGGGAGCGTCCATGACTTTATGTTTGAGGAGAGCGTATGCCTACTTCTGAGAGCTTCATGGTATATACCTCTGATCGTTGAAGATCGGGAAGAAACCTATGAAGATCCTGATGAGTACTACCCTTACGAGGATGATGACGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCGTCGAGTCTCCGCATCGGCAATCGAAGGTGGGGAGACAATGGATATGTGAGGGGAGGTCGACAAGAAGCACGACCAGTTATTAGGTCAACTGTTCCAGTGCATGCAGGAGCTAGTTCATCACGTGAGCCTACAAAAAAAGATGCTTCCAAAGATAAAACCGGTCGACGAGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCTGCCGCAGCTAAACATCAGGAACATCTAGCTAGGTTTGGGCGGAAGTGATTCAAGTTCCTGTATATAACAAGCCTTGCGCTTAGACCCTGTGTACAGTTCTAAGATTCAATTTACTTTCACAGTTGGAAGTACCTTACCTCCCCTGAGCCTGGTGGCTCCCCAATTAAATCTATGGTGGGGATTATACTTGCATGGTATAAAGGACACCCCAATGAGTTCTTTGTATGAACATTGAATCTCAAAATCAATCATAGAACAATTGTTATGGTCAGATTTTCTGTTCTTTTTTAG

Coding sequence (CDS)

ATGGCTTCCTCTGGAATCTCTACTGAAAGCGCTGAATTGTCTGATGCCGTTCAAATACTGGAAGTTTGCAACCAGATCGAAATGGGAAAGAAGGTAGAGATTCAAGGAACAGGTCATGGGAGTCATGATGGGGTTTGTGCAATATGCTTAAATAAGATAGCTCTCCAAGAAACTGCCTTAGTGAGGGGTTGCGAGCATGCCTATTGTGCGACTTGCATCCTTCGATGGGCCTCATATAATAAGAATCCGACATGTCCACAATGTAAACATCCATTTGAGTTCCTGATTGTGCATCGTTCTCTTGATGGGAGCGTCCATGACTTTATGTTTGAGGAGAGCGTATGCCTACTTCTGAGAGCTTCATGGTATATACCTCTGATCGTTGAAGATCGGGAAGAAACCTATGAAGATCCTGATGAGTACTACCCTTACGAGGATGATGACGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCGTCGAGTCTCCGCATCGGCAATCGAAGGTGGGGAGACAATGGATATGTGAGGGGAGGTCGACAAGAAGCACGACCAGTTATTAGGTCAACTGTTCCAGTGCATGCAGGAGCTAGTTCATCACGTGAGCCTACAAAAAAAGATGCTTCCAAAGATAAAACCGGTCGACGAGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCTGCCGCAGCTAAACATCAGGAACATCTAGCTAGGTTTGGGCGGAAGTGA

Protein sequence

MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Homology

[Close]

BLAST of Carg02689 vs. NCBI nr
Match: KAG6605938.1 (hypothetical protein SDJN03_03255, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035883.1 hypothetical protein SDJN02_02682 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 486.9 bits (1252), Expect = 1.0e-133
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Carg02689 vs. NCBI nr
Match: XP_022958365.1 (uncharacterized protein LOC111459609 [Cucurbita moschata])

HSP 1 Score: 483.8 bits (1244), Expect = 8.7e-133
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQE LARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQERLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Carg02689 vs. NCBI nr
Match: XP_023533579.1 (uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.3 bits (1240), Expect = 2.5e-132
Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPVIRSTVPVHAGASSSREP KKD SKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPIKKDDSKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Carg02689 vs. NCBI nr
Match: XP_022995136.1 (uncharacterized protein LOC111490767 [Cucurbita maxima])

HSP 1 Score: 482.3 bits (1240), Expect = 2.5e-132
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           MASSGISTESAELSDAVQILEVCNQIEMGKKVEI GTGHGSHDGVCAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWY+PLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ
Sbjct: 121 SWYVPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPVIRSTVPVHAGASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Carg02689 vs. NCBI nr
Match: XP_022153003.1 (uncharacterized protein LOC111020607 [Momordica charantia])

HSP 1 Score: 432.6 bits (1111), Expect = 2.3e-117
Identity = 210/242 (86.78%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           M SSGIS E AE+SDAVQ LE+C+Q+++GKKVEIQGTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MTSSGISIEGAEMSDAVQELEICDQVKIGKKVEIQGTGHGSHDGACAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASY + PTCPQCKHPFEFLIVHRSLDG +HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGGIHDYMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWYIPL+VEDREETY+DP+EYYPYEDDDEE EE YLGASSSLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYIPLVVEDREETYDDPEEYYPYEDDDEELEEDYLGASSSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARP+ R +VP  A ASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 
Sbjct: 181 EARPIFRPSVPEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARL 240

Query: 241 GR 243
           GR
Sbjct: 241 GR 242

[Close]

BLAST of Carg02689 vs. ExPASy Swiss-Prot
Match: Q99590 (Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.9e-05
Identity = 22/60 (36.67%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 46  CAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSV 105
           C ICLN +  +E      C H +C TCIL+WA      +CP  + PF+ +    +L+G V
Sbjct: 41  CPICLNCLLEKEVGFPESCNHVFCMTCILKWA--ETLASCPIDRKPFQAVFKFSALEGYV 98

[Close]

BLAST of Carg02689 vs. ExPASy TrEMBL
Match: A0A6J1H396 (uncharacterized protein LOC111459609 OS=Cucurbita moschata OX=3662 GN=LOC111459609 PE=4 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 4.2e-133
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ
Sbjct: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQE LARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQERLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Carg02689 vs. ExPASy TrEMBL
Match: A0A6J1K158 (uncharacterized protein LOC111490767 OS=Cucurbita maxima OX=3661 GN=LOC111490767 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132
Identity = 240/243 (98.77%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           MASSGISTESAELSDAVQILEVCNQIEMGKKVEI GTGHGSHDGVCAICLNKIALQETAL
Sbjct: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIHGTGHGSHDGVCAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA
Sbjct: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWY+PLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ
Sbjct: 121 SWYVPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPVIRSTVPVHAGASSSREP KKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVIRSTVPVHAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240

Query: 241 GRK 244
           GRK
Sbjct: 241 GRK 243

[Close]

BLAST of Carg02689 vs. ExPASy TrEMBL
Match: A0A6J1DGD3 (uncharacterized protein LOC111020607 OS=Momordica charantia OX=3673 GN=LOC111020607 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.1e-117
Identity = 210/242 (86.78%), Postives = 224/242 (92.56%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           M SSGIS E AE+SDAVQ LE+C+Q+++GKKVEIQGTGHGSHDG CAICLNKIALQETAL
Sbjct: 1   MTSSGISIEGAEMSDAVQELEICDQVKIGKKVEIQGTGHGSHDGACAICLNKIALQETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASY + PTCPQCKHPFEFLIVHRSLDG +HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCVTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGGIHDYMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWYIPL+VEDREETY+DP+EYYPYEDDDEE EE YLGASSSLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYIPLVVEDREETYDDPEEYYPYEDDDEELEEDYLGASSSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARP+ R +VP  A ASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLAR 
Sbjct: 181 EARPIFRPSVPEFAAASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARL 240

Query: 241 GR 243
           GR
Sbjct: 241 GR 242

[Close]

BLAST of Carg02689 vs. ExPASy TrEMBL
Match: A0A6J1FXD4 (uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC111448431 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 4.8e-113
Identity = 207/241 (85.89%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           M SSGIS +SAELSDAVQ L+VC+Q+EM KK+EIQGTGHGSHDG CAICLNKI+L ETAL
Sbjct: 1   MTSSGISLKSAELSDAVQDLKVCDQVEMWKKLEIQGTGHGSHDGACAICLNKISLPETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWY PLIV+DREETY+DP+EYYPYED DEE EEAYLGAS SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYEPLIVKDREETYDDPEEYYPYEDQDEELEEAYLGASPSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV+R   P  +GASSSREPT KDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVLR---PEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 238

Query: 241 G 242
           G
Sbjct: 241 G 238

[Close]

BLAST of Carg02689 vs. ExPASy TrEMBL
Match: A0A6J1JFP2 (uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.1e-108
Identity = 203/241 (84.23%), Postives = 217/241 (90.04%), Query Frame = 0


Query: 1   MASSGISTESAELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETAL 60
           M SSGIS +SAELSDAVQ L+VC+Q EM KK+E+Q TGHGSH G CAICLNKI+L ETAL
Sbjct: 1   MTSSGISLKSAELSDAVQDLKVCDQEEMWKKLEMQRTGHGSH-GSCAICLNKISLPETAL 60

Query: 61  VRGCEHAYCATCILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRA 120
           VRGCEHAYC TCILRWASY + PTCPQCKHPFEFLIVHRSLDGS+HD+MFEESVCLLLRA
Sbjct: 61  VRGCEHAYCTTCILRWASYTQKPTCPQCKHPFEFLIVHRSLDGSIHDYMFEESVCLLLRA 120

Query: 121 SWYIPLIVEDREETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQ 180
           SWY PLIV+DREETY+DP+EYYPYED DEE EEAYLG S SLRIGNRRWGDNGYVR GRQ
Sbjct: 121 SWYEPLIVKDREETYDDPEEYYPYEDQDEELEEAYLGDSPSLRIGNRRWGDNGYVRAGRQ 180

Query: 181 EARPVIRSTVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 240
           EARPV+R   P  +GASSSREPT KDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF
Sbjct: 181 EARPVLR---PEFSGASSSREPTTKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARF 237

Query: 241 G 242
           G
Sbjct: 241 G 237

[Close]

BLAST of Carg02689 vs. TAIR 10
Match: AT5G19430.1 (RING/U-box superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 2.1e-68
Identity = 139/245 (56.73%), Postives = 176/245 (71.84%), Query Frame = 0


Query: 12  ELSDAVQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCAT 71
           ++ D +Q L + NQ +   + EI     G+H G CAICL++I LQETA+V+GCEH YC T
Sbjct: 12  QVIDGIQDLALQNQDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHTYCVT 71

Query: 72  CILRWASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYIPLIVEDR 131
           CILRWAS  ++PTCPQCKHPF+FL VHR+LDGS+ DF+FEESVCLLLRASW++PL V ++
Sbjct: 72  CILRWASCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVEQ 131

Query: 132 EE----TYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIR 191
                  ++D D  Y YED+D++ +E YL   SSLRIGNRRWG NG+VR GRQEARPV R
Sbjct: 132 ASYSHGYHDDFDIPYDYEDEDDDLDEFYL-HGSSLRIGNRRWGGNGFVRSGRQEARPVQR 191

Query: 192 -----STVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLA 244
                S+    +G+SSS    K+  + + TGRRAKRA+KREAA+KA    AAAKH+ HL 
Sbjct: 192 YSGSGSSSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAHLV 251

[Close]

BLAST of Carg02689 vs. TAIR 10
Match: AT5G19430.2 (RING/U-box superfamily protein )

HSP 1 Score: 252.3 bits (643), Expect = 4.0e-67
Identity = 138/239 (57.74%), Postives = 172/239 (71.97%), Query Frame = 0


Query: 20  LEVCNQIEMGKKV--EIQGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRWA 79
           L + + I   KK+  EI     G+H G CAICL++I LQETA+V+GCEH YC TCILRWA
Sbjct: 3   LALLHNIRDKKKIQEEIHEPSFGNHGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWA 62

Query: 80  SYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYIPLIVEDREE---- 139
           S  ++PTCPQCKHPF+FL VHR+LDGS+ DF+FEESVCLLLRASW++PL V ++      
Sbjct: 63  SCKESPTCPQCKHPFDFLSVHRALDGSIEDFLFEESVCLLLRASWFVPLDVVEQASYSHG 122

Query: 140 TYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIR-----S 199
            ++D D  Y YED+D++ +E YL   SSLRIGNRRWG NG+VR GRQEARPV R     S
Sbjct: 123 YHDDFDIPYDYEDEDDDLDEFYL-HGSSLRIGNRRWGGNGFVRSGRQEARPVQRYSGSGS 182

Query: 200 TVPVHAGASSSREPTKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK 244
           +    +G+SSS    K+  + + TGRRAKRA+KREAA+KA    AAAKH+ HL R GRK
Sbjct: 183 SSSSSSGSSSSEPKDKQVKTTNTTGRRAKRAMKREAANKAAEVTAAAKHEAHLVRLGRK 240

[Close]

BLAST of Carg02689 vs. TAIR 10
Match: AT5G12310.1 (RING/U-box superfamily protein )

HSP 1 Score: 237.7 bits (605), Expect = 1.0e-62
Identity = 136/243 (55.97%), Postives = 164/243 (67.49%), Query Frame = 0


Query: 17  VQILEVCNQIEMGKKVEIQGTGHGSHDGVCAICLNKIALQETALVRGCEHAYCATCILRW 76
           V +L + +Q E            G+H G CAICL+ I LQETA+V+GCEHAYC TCILRW
Sbjct: 14  VDVLPLQDQDEKKTPQVFNELSFGNHGGCCAICLDTIPLQETAMVKGCEHAYCVTCILRW 73

Query: 77  ASYNKNPTCPQCKHPFEFLIVHRSLDGSVHDFMFEESVCLLLRASWYIPLIVEDR----- 136
           ASY + PTCPQCK PF+FL VHR+LDGSV DFMFEESVCLLLRASW+ PL   +R     
Sbjct: 74  ASYKEKPTCPQCKLPFDFLNVHRALDGSVEDFMFEESVCLLLRASWFQPLEAVERVSDND 133

Query: 137 --EETYEDPDEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRGGRQEARPVIRST 196
                ++ P EY   ++DD++ +E Y+   SSLR+GNRRWGDNG+VR GRQEARPV    
Sbjct: 134 NFNYDFDIPPEYEEEDEDDDDLDEFYM-QGSSLRLGNRRWGDNGFVRAGRQEARPVQHKN 193

Query: 197 VPVHA-----GASSSREPTKKDASKDKTGRRAKRALKREAADKA----AAAKHQEHLARF 244
               A      +SSS EP +K +S   TGRRAKRA+KREAA+KA    AAAKH+  L R 
Sbjct: 194 RGGQASGSEPASSSSCEPKEKTSSA-ITGRRAKRAMKREAANKAAEAVAAAKHEALLVRL 253

[Close]

BLAST of Carg02689 vs. TAIR 10
Match: AT3G30460.1 (RING/U-box superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 22/49 (44.90%), Postives = 26/49 (53.06%), Query Frame = 0


Query: 45  VCAICLNKIALQETALVRGCEHAYCATCILRWASYNKNPTCPQCKHPFE 94
           VCAIC  ++A  E      C H Y   CI  W S N+N TCP C+H  E
Sbjct: 96  VCAICREELAANERLSELPCRHYYHKECISNWLS-NRN-TCPLCRHNVE 142

The following BLAST results are available for this feature:

BLAST of Carg02689 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605938.1	1.0e-133	100.00	hypothetical protein SDJN03_03255, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022958365.1	8.7e-133	99.59	uncharacterized protein LOC111459609 [Cucurbita moschata]	[more]
XP_023533579.1	2.5e-132	99.18	uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo]	[more]
XP_022995136.1	2.5e-132	98.77	uncharacterized protein LOC111490767 [Cucurbita maxima]	[more]
XP_022153003.1	2.3e-117	86.78	uncharacterized protein LOC111020607 [Momordica charantia]	[more]

BLAST of Carg02689 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99590	1.9e-05	36.67	Protein SCAF11 OS=Homo sapiens OX=9606 GN=SCAF11 PE=1 SV=2	[more]

BLAST of Carg02689 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H396	4.2e-133	99.59	uncharacterized protein LOC111459609 OS=Cucurbita moschata OX=3662 GN=LOC1114596...	[more]
A0A6J1K158	1.2e-132	98.77	uncharacterized protein LOC111490767 OS=Cucurbita maxima OX=3661 GN=LOC111490767...	[more]
A0A6J1DGD3	1.1e-117	86.78	uncharacterized protein LOC111020607 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1FXD4	4.8e-113	85.89	uncharacterized protein LOC111448431 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JFP2	6.1e-108	84.23	uncharacterized protein LOC111484597 OS=Cucurbita maxima OX=3661 GN=LOC111484597...	[more]

BLAST of Carg02689 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19430.1	2.1e-68	56.73	RING/U-box superfamily protein	[more]
AT5G19430.2	4.0e-67	57.74	RING/U-box superfamily protein	[more]
AT5G12310.1	1.0e-62	55.97	RING/U-box superfamily protein	[more]
AT3G30460.1	1.3e-04	44.90	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 46..88 e-value: 7.2E-6 score: 35.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 46..89 e-value: 1.1E-8 score: 35.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 46..89 score: 12.592549
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 22..94 e-value: 4.1E-12 score: 47.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..243
None	No IPR available	PANTHER	PTHR47361:SF4	RING/U-BOX SUPERFAMILY PROTEIN	coord: 11..243
None	No IPR available	PANTHER	PTHR47361	RING/U-BOX SUPERFAMILY PROTEIN	coord: 11..243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 40..96
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 64..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02689-RA	Carg02689-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0046872	metal ion binding