Carg01758 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01758
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DEAD-box ATP-dependent RNA helicase 22
Location	Carg_Chr04: 9453189 .. 9459606 (+)
RNA-Seq Expression	Carg01758
Synteny	Carg01758

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTGTATCGCTCTGCTTCTGCGCTCTATTTAGAGAGATTAGCGTCATCGTCTAAGCTGCTTTTCTCATTCAAAAATTCGAACTTATTGGTTCCTAGTTCATGTTCTATCCGAATTGGGTTGGTTTGTTTGAGAAAACCTTGCTCTAAGCAATCAAGGGCTGTTGGAACTGTTGCTGCTTCTGCTGCAACACCTGTTGCTGATGGAATTGGAAGGGATACTTTTTATGCGGCTGAAGGTGTTTCTTGGACATCACTTGGTGTCTCTGATAATGTTTCTCGAGCTCTTGTTAGTGCCGGAATCCAGAGGCCATCATTGATTCAGGTACACGGACATCTTCCTGTCATGAGAATTAGAATATTACAGAACTTTTCGCGTAGTGTGTTCGCCTTGGTCTTCGGATTGCAAGGACTAGCCAGTAGTTGGGAGCTGACTATGTTTTGGTGCTTAAGAATAGTTAGGGAGTGAAAACCATGTTTGCTTGTATAAGAATTGAACTTGTTTCGATAAGATGGAATATATTCTCCCTCTTGTTCTCCCTTCACTGGGTTTCTTTGGTTTTCTTGAAAACATAGAATGAAGCATATAAAATGAAAAAGAAAATGCCTTAGGAACCACGGCTCTTCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATCGCTTTGCTTTTGGTTTTTTCCTAAATGCCTCGTACCATGGAGATAATATTACTTACTTATAGACACATGATCTTTCCCTTAACTAGTCGATGTGGAACTCCCTCCCAACAATCCTCCTCTTGAACAAAGTACACCATAGAGTCTCCTCTAAGGCTTATAGAGAACTCAAACAGCCTCCCCTTCATTGAGGCTCGATTCCTTTTTCTGGAGCTCTATAACAAATTACACCCTTTGTTTGACACTTGAGTCACTTTTTACTACACCTTTGAGGCTCACTACTTCTTTGTTCGACATTTGAGTATTCTATTGACATGAATAAGTTAAGAATAGATATTATTCGCTTTGAGTGTAAGCTCTCATTACTTTACTTTTGGTTTTCCCAAAAGGCCTCATACCAACGGAGATAGTATTCCTTATAAACTCATGATCTTCCCTTAATTAACCAATGTGGGACTCCCTCCCAACAATCTTCAACAATCTTCAGCATAAGATGTAATATCTTAGATACATATTTTGCTTTCGGTGGTCTTGATAGCGTGTCAATGGAAGTTTCTGCAACCCCTTCTAATCTTTCTTGGTTGATGCCTTTATATTTCTCTACCTTTTTATCACTTCTGATGCATTCTTGTTTGCGTTTAAGGCTGCTTGCGTTCCCTCTATAATGTCGGGAAACGATGTGGTCATTGCAGCCGAAACTGGTAGTGGTAAAACACATGGTTACCTAGTGCCCCTAATTAACAAGATATGCAATGAACAACGTGATGGCGACCAAGACTTGGCTTCAATTAATAAGCTCTCTCTTGTTCTATGTCCAAATGTAATGCTGTGTGAGCAAGTGGTTCAAATGGCCAACACCCTTTGCGATGAACATGGAAAATCGCTTCTCAGAGTTACAGCTGTTTGTGGAAGACAGGTAAAAAAAAAAAGTTGTCCAAGATAATATATGACTTTAACCATGTCGATATGATTCTATCTTTGACTAAGAACTCAAACTGCAGGGTTGGCCAGTTTACAAGCCGGATATTATTGTATCAACACCAGCAGCTCTACTTAATTATATTGAACCAAACAGGAGTCGACGAATGAAGTTTCTTTGTGCTGTGAAGCATGTGGTACTTTTCACCCATTTCTGTTAAAATAATGTTATCTCCATGATGTATACAAATCGAATCAATAGAAGACGAGAAGATAAAAAAAAAAAGAAAACAAGAGAAAAGCAAACAAAAAAACAAGATAACGAGAAAAGACGGAAGATAAAAAAACAAATAACATAAATATATAGATTGCAAATAAGAACAACAACATAAACCTGATAAAATAGAAAGAAAAAAAAAAAAGAAACAAACAAATAGAAAACAGGATACAATAGCAAGATAGCAAAGACAGAGAAAAAATAAATTCAACAACAAAAAAATGCTAAAAGTAATAAAGAAAAGAATAAAAAGATAGAAGAGAAAAAAATAAAAATACAAAATAACAAAAAAAACACAAACAAAATCACCAGAATAACATAGCAAAAACAACGAAGAAATAATGGTACAGTAAATAATAACACATTAGATAAAAAAATACAAATAGAAAGAGGCAATTAAAAAAAAAACATATAATAAACAAAAGAGAAAAAACATATAGAAAAATAATAAAAATAATAAGAATGCATACTCACAAACATCATATATTACATAAAAATAACACTATTATCCAGTAAAAAAAAAAATATATAAATAATATAAGAAAACAAAAATAAATAAAATAAATAAAAAACCTCAACACAATAAAACACTAGATAGAACATAATAATAAGAACAAATAATAACATGAGAAAGAAAAGAAGGACATAAGACTGATGACATAAAAACAGAAAAATAAGAAAAGATAGAGAATAATATAAAGAAGGAAAGATAAAGAAATAAAAGAAATAATAGAGAAAATATAAATCAGACAAAAAAAACAAAAGAGAAATAAAGTAGAGGAAATACATGATAGAGAAAGAAAGAATAAAAAGAATAAAAAGAACAAACTAAAAAACATGAAAGAAAAAAATAGAAGAATAAAGCATAAAAAAATAAAAAATAAGAGAAATGTAAAAAAAAAGTGATAAAAAAAGAAAAATAAGTGAAAATATATAAAAACAAGATATAAAAGGAAAGAATTAAAAAGAACATACAAGAATATAGACAACAATTATAAGAGAGTAACATAAAGAATTAATAAAGTGCACAAGTATTAGATTAAATGAGTCAACATAATACAAGAAAAAGAATAACATATATCAAACAAAGACTAGAATAAGAATAACAGAAGTTAACGACAAAGAAAAATAAGAACAAAAAAAAATAAAATACATTGGATAATAAATATAAGATATACAAAATAATATTAAAATACAAGAAAAAGTAATAAATATATAAATAAAAGAGTAAAGAACAAAATAATATCATTAATAAGAATAATATACAATCGAAAGATAAAATAAAATTATGCACATGAAAAGTGAAAAATATTATCAATAAAAATAAAGTATAATCATTAAGCAACCATTTTGATAATGGGGATTTGAAAATTATAATAAAAAATATAAACACATATATATATATAGTATGACAAAAAATGAAAACATAAAAAACCAACAAATTAGTAAATAAGAAACACAACAACATTAAAAAATAAAATACTTAAAATGATACAAAAAAAAGAAAAGGAAAGGAAATAAGAAAGAACACACAACAGAAGAGAAAAAAATACACACAAACATATTAAGAAAAATAGATAAAAACACAAACACAACATATAATAATAATTACTTATAATAGATAAACACGCCAACAAAAAAGGAAACACATAACAGACAATAGAATAAGAAAATATGTATAAAGAGGGGCATATGTTGACCCGTTACATATTCACCGTTCAGCTACCAGAGGATAAAATAAAAAAAAAAAAAAACGCGATAAAAACGGAAGATCCACACCTAAGAATACTTCTTCCATACAACATCAGATATAAAGAAGAAAATACTCAACAAAAAAAACTAAAGAAACCATATACACAACAACATTAGAAAAACCAAGAGAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAACAATCACTAGATGCCCAGACGATATCGCACTTGCATTACCGATCCGATGAGCGTTTGCTTCTCGATACTTAGCATGCGTCTGGCTCACCCTCCAGTCCGACTGAGGCGGTCAGCGTTGTATTCCGGCATCGCTCTTTACCCATACTCCGTCGAGGGCTAATCAGTTCGCGCGTTGCTTCTTTACGTTCTCGGATTGCCCCCGAACTAGCGCTATTCCGGAGGCTCGCACTGATTCACCCTTTGATTTCAGAGCAAAGGAGGGGTACGAGATACGTCTGGGTAGCGCTCCCCTCCGAGTATGTACGCGACGCCCCCGCTGGTGATTGTCCTAGCTTGGCGTCCGTCGGATGCGTAGCTCTAGGGAGGCTCCTGATACGTGCCACTCTTTCGGTTTCCCTGACGCATTCCGCTTTCTCTGACCTCCAATCTCCCTTCTACTAATATGCCTCGTCCGCGTGGATTTCCCCAAACTTCTTTGCATAGCGGCTGTACAGTCGCAATTGAGTGGCGAGGTGCATCCTGATCGCACGCCTCCCAGCGTTTGCCACCGTACGGGCACTGAGGGAATATACATCAGTTAGTTGTTAGCTATCTGAAAATTTAACCTTGTCTCTAGAATGGAACATTGCTTATTGGTTACTGTCTGATTTTCTCCAAATTCTCACCTCTGTACTGTAAAGTTGATTATAAGTTAATATCTTGGTTTCTGCTTACACTATTTTCTTTGAGTTCACACAAATATCAGTTAGATTGTATCCTTTAGTTTCACAATTTGACCTCGGCAAAAGGCAATTGTTCTTATCTTCTTGCAAACTTCACTCTCAGTTTCCTTTTCGCCATTCTTGCATTTGGCTGCATATTACTTCTTAAGTTGAATAATGACACTCTGTTTGGTAGTTTAGATTGGAGCAGAGGTGGGTTGAAGTGACAGTTGATAACCAGGTAGATGAACTTATCAAGGCTGTGAATCAATCTAAATCTCAACTGAGAAATATTGATGGCGGTGCAATTCGAACAATGGTGTTTGCGAACACCGTTGAAACTGTTGAAGCAGTGGCCAATATATTGTCGGTGGCAGGTACGGAATGTTTTTGTTACCACAAAGACCGCAGTTTGGAGGAGCGGTCAAAGATCTTGGCTGATTTCAGAGAGAACGGTGGTGTTCTTGTTTGCACTGATGCTGCTGCCAGAGGAGTGGATATTCCAAACGTAGCCCACGTTATTCAGGTGCTTCTCTTTTAATAAAATGCTTTCTGCAGATGGCTCTAGCATCTATGGATCCAATATTAGCATTTGAATGTTGGTTCCAATGGCTTTACTTTTAAAATGGGGTGGACTGAAGAATATCTGTTTTTTCCTTTTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTCTACATAGGATTGGTAGAACTGGTAGAGCTGGTCAATGTGGACTTGTCACTAGCATGTACACTAAAGCTAACCGCGATCTCGTAGCAGCAGTTCGACGCGCAGAAAACTTGTCTCAACCTGTGGTAATAGTTTGTCTGCCTCCTTCTCTACCTCTAACACGTTGAGCTGCGACACAATTCGACTTAACTTTAGCCATATAGCCAGAGCACTTAATGTCATATTGTCTTCCCTATCAATCTAGAATCAACTTCACTACTTCACTTGCTAACCAGTAGCAGTCCATGCCCATCGCTAACAGATATTGTCTGCTTTGGGCTTTTCCTTTCAAGTTTTCTCTCAAGGTTTTCACAATTTTATAAAGAATGCTTCGTTCCCCCTCTCCAACCAATGTGGGATCTTACAATCCACTCTCTTCGGTTCCAGCGTCCTTGCTGGCACTCGTTCTCCTCCTAACCGACTGGGATCTCCACATAACCACTCAAAACTAAGGCTATCAATTCCTTTATTGAATCAATGCCTCCAACTGTCTTCGGTGGTTAAGTTTTGACACTTGGCGCTTTCTTTTTCGGTGCAGGAGGCAGCATTTAGCAGGAAACGAAGCTTCCGAAACAAGCTTAAGAAACAGGGTAAGTTTGATTTTGAACTTGCCAGAAGCTGAAAAAGTATGACGGTAGAAAGAACCCTTTGGGTGAATGTAGAAGACAATGAATTCCCACAGAGTGGTTATTGAAACTGATATATATCTTATATCTGCAGGTTCTGCAAAAGAGAGTGTTCTGTCATGAATGGAAGAGATGATTAGCTTGTATAGATGAAGAACGATGAAAACAACGAACATCCCTTCCTATTGCTTCACATTTCAACACTGTTAAGGATAGAACATGACAAGAAAAAGACTTCTAATATTTATAGATTTAGAATGCATTCATTCAAAGTTAGAAATACCACTTGGATATCAGTGTTTCCTAATAACTATGGGGATGAGAATTGACTGGAGTTGAATGAAATTCATTAAGATGTTGAACGAAAGTCGAGCCATGCAACGTTGTGTAGATATAGAATAAAAACTGAGACCCGAACAATGTCACACCGTTTATAACAGCCCAATCTCACTATTAGCCGTTATTATTCTTTTTGGGTTTTCCCTCTTGAACTTCCCTTCGAGATTTTTAAAACGTGTTTGCTAGAAAGAGATTTCTACGCCCTTATAA

mRNA sequence

ATGCTTCTGTATCGCTCTGCTTCTGCGCTCTATTTAGAGAGATTAGCGTCATCGTCTAAGCTGCTTTTCTCATTCAAAAATTCGAACTTATTGGTTCCTAGTTCATGTTCTATCCGAATTGGGTTGGTTTGTTTGAGAAAACCTTGCTCTAAGCAATCAAGGGCTGTTGGAACTGTTGCTGCTTCTGCTGCAACACCTGTTGCTGATGGAATTGGAAGGGATACTTTTTATGCGGCTGAAGGTGTTTCTTGGACATCACTTGGTGTCTCTGATAATGTTTCTCGAGCTCTTGTTAGTGCCGGAATCCAGAGGCCATCATTGATTCAGGCTGCTTGCGTTCCCTCTATAATGTCGGGAAACGATGTGGTCATTGCAGCCGAAACTGGTAGTGGTAAAACACATGGTTACCTAGTGCCCCTAATTAACAAGATATGCAATGAACAACGTGATGGCGACCAAGACTTGGCTTCAATTAATAAGCTCTCTCTTGTTCTATGTCCAAATGTAATGCTGTGTGAGCAAGTGGTTCAAATGGCCAACACCCTTTGCGATGAACATGGAAAATCGCTTCTCAGAGTTACAGCTGTTTGTGGAAGACAGGGTTGGCCAGTTTACAAGCCGGATATTATTGTATCAACACCAGCAGCTCTACTTAATTATATTGAACCAAACAGGAGTCGACGAATGAAGTTTCTTTGTGCTGTGAAGCATGTGCATGCGTCTGGCTCACCCTCCAGTCCGACTGAGGCGGTCAGCGTTGTATTCCGGCATCGCTCTTTACCCATACTCCGTCGAGGGCTAATCAGTTCGCGCGTTGCTTCTTTACGTTCTCGGATTGCCCCCGAACTAGCGCTATTCCGGAGGCTCGCACTGATTCACCCTTTGATTTCAGAGCAAAGGAGGGGTACGAGATACGTCTGGGTAGCGCTCCCCTCCGAGTATTTTAGATTGGAGCAGAGGTGGGTTGAAGTGACAGTTGATAACCAGGTAGATGAACTTATCAAGGCTGTGAATCAATCTAAATCTCAACTGAGAAATATTGATGGCGGTGCAATTCGAACAATGGTGTTTGCGAACACCGTTGAAACTGTTGAAGCAGTGGCCAATATATTGTCGGTGGCAGGTACGGAATGTTTTTGTTACCACAAAGACCGCAGTTTGGAGGAGCGGTCAAAGATCTTGGCTGATTTCAGAGAGAACGGTGGTGTTCTTGTTTGCACTGATGCTGCTGCCAGAGGAGTGGATATTCCAAACGTAGCCCACGTTATTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTCTACATAGGATTGGTAGAACTGGTAGAGCTGGTCAATGTGGACTTGTCACTAGCATGTACACTAAAGCTAACCGCGATCTCGTAGCAGCAGTTCGACGCGCAGAAAACTTGTCTCAACCTGTGGTTCTGCAAAAGAGAGTGTTCTGTCATGAATGGAAGAGATGATTAGCTTGTATAGATGAAGAACGATGAAAACAACGAACATCCCTTCCTATTGCTTCACATTTCAACACTGTTAAGGATAGAACATGACAAGAAAAAGACTTCTAATATTTATAGATTTAGAATGCATTCATTCAAAGTTAGAAATACCACTTGGATATCAGTGTTTCCTAATAACTATGGGGATGAGAATTGACTGGAGTTGAATGAAATTCATTAAGATGTTGAACGAAAGTCGAGCCATGCAACGTTGTGTAGATATAGAATAAAAACTGAGACCCGAACAATGTCACACCGTTTATAACAGCCCAATCTCACTATTAGCCGTTATTATTCTTTTTGGGTTTTCCCTCTTGAACTTCCCTTCGAGATTTTTAAAACGTGTTTGCTAGAAAGAGATTTCTACGCCCTTATAA

Coding sequence (CDS)

ATGCTTCTGTATCGCTCTGCTTCTGCGCTCTATTTAGAGAGATTAGCGTCATCGTCTAAGCTGCTTTTCTCATTCAAAAATTCGAACTTATTGGTTCCTAGTTCATGTTCTATCCGAATTGGGTTGGTTTGTTTGAGAAAACCTTGCTCTAAGCAATCAAGGGCTGTTGGAACTGTTGCTGCTTCTGCTGCAACACCTGTTGCTGATGGAATTGGAAGGGATACTTTTTATGCGGCTGAAGGTGTTTCTTGGACATCACTTGGTGTCTCTGATAATGTTTCTCGAGCTCTTGTTAGTGCCGGAATCCAGAGGCCATCATTGATTCAGGCTGCTTGCGTTCCCTCTATAATGTCGGGAAACGATGTGGTCATTGCAGCCGAAACTGGTAGTGGTAAAACACATGGTTACCTAGTGCCCCTAATTAACAAGATATGCAATGAACAACGTGATGGCGACCAAGACTTGGCTTCAATTAATAAGCTCTCTCTTGTTCTATGTCCAAATGTAATGCTGTGTGAGCAAGTGGTTCAAATGGCCAACACCCTTTGCGATGAACATGGAAAATCGCTTCTCAGAGTTACAGCTGTTTGTGGAAGACAGGGTTGGCCAGTTTACAAGCCGGATATTATTGTATCAACACCAGCAGCTCTACTTAATTATATTGAACCAAACAGGAGTCGACGAATGAAGTTTCTTTGTGCTGTGAAGCATGTGCATGCGTCTGGCTCACCCTCCAGTCCGACTGAGGCGGTCAGCGTTGTATTCCGGCATCGCTCTTTACCCATACTCCGTCGAGGGCTAATCAGTTCGCGCGTTGCTTCTTTACGTTCTCGGATTGCCCCCGAACTAGCGCTATTCCGGAGGCTCGCACTGATTCACCCTTTGATTTCAGAGCAAAGGAGGGGTACGAGATACGTCTGGGTAGCGCTCCCCTCCGAGTATTTTAGATTGGAGCAGAGGTGGGTTGAAGTGACAGTTGATAACCAGGTAGATGAACTTATCAAGGCTGTGAATCAATCTAAATCTCAACTGAGAAATATTGATGGCGGTGCAATTCGAACAATGGTGTTTGCGAACACCGTTGAAACTGTTGAAGCAGTGGCCAATATATTGTCGGTGGCAGGTACGGAATGTTTTTGTTACCACAAAGACCGCAGTTTGGAGGAGCGGTCAAAGATCTTGGCTGATTTCAGAGAGAACGGTGGTGTTCTTGTTTGCACTGATGCTGCTGCCAGAGGAGTGGATATTCCAAACGTAGCCCACGTTATTCAGGCAGACTTTGCTACTTCTGCTGTAGATTTTCTACATAGGATTGGTAGAACTGGTAGAGCTGGTCAATGTGGACTTGTCACTAGCATGTACACTAAAGCTAACCGCGATCTCGTAGCAGCAGTTCGACGCGCAGAAAACTTGTCTCAACCTGTGGTTCTGCAAAAGAGAGTGTTCTGTCATGAATGGAAGAGATGA

Protein sequence

MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVAASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHASGSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIHPLISEQRRGTRYVWVALPSEYFRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRAENLSQPVVLQKRVFCHEWKR

Homology

[Close]

BLAST of Carg01758 vs. NCBI nr
Match: KAG7032160.1 (DEAD-box ATP-dependent RNA helicase 22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 950.3 bits (2455), Expect = 6.6e-273
Identity = 488/488 (100.00%), Postives = 488/488 (100.00%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180
           DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180

Query: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA 240
           TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA
Sbjct: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA 240

Query: 241 SGSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIHPLISEQR 300
           SGSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIHPLISEQR
Sbjct: 241 SGSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIHPLISEQR 300

Query: 301 RGTRYVWVALPSEYFRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANT 360
           RGTRYVWVALPSEYFRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANT
Sbjct: 301 RGTRYVWVALPSEYFRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANT 360

Query: 361 VETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVA 420
           VETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVA
Sbjct: 361 VETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVA 420

Query: 421 HVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRAENLSQPVVLQKR 480
           HVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRAENLSQPVVLQKR
Sbjct: 421 HVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRAENLSQPVVLQKR 480

Query: 481 VFCHEWKR 489
           VFCHEWKR
Sbjct: 481 VFCHEWKR 488

[Close]

BLAST of Carg01758 vs. NCBI nr
Match: KAG6601380.1 (DEAD-box ATP-dependent RNA helicase 22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 737.6 bits (1903), Expect = 6.7e-209
Identity = 417/567 (73.54%), Postives = 435/567 (76.72%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180
           DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180

Query: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA 240
           TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHV  
Sbjct: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVF 240

Query: 241 S-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIH 300
                   GS  +    +  + R     + R      R+  L +  + +L L     +  
Sbjct: 241 DEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADASSQLTLQDESDIET 300

Query: 301 PLISE----------------------------------------QRRGTRYVWVA---- 360
             ISE                                          R  +Y++VA    
Sbjct: 301 ETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLP 360

Query: 361 --------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQSKSQL 420
                               +  +Y      RLEQRWVEVTVDNQVDELIKAVNQSKSQL
Sbjct: 361 VNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQL 420

Query: 421 RNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVL 480
           RNIDGGAIRTMVFANTVETVEAVANILSVAGTECF YHKDRSLEERSKILADFRENGGVL
Sbjct: 421 RNIDGGAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRENGGVL 480

Query: 481 VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA 489
           VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA
Sbjct: 481 VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA 540

[Close]

BLAST of Carg01758 vs. NCBI nr
Match: XP_022956592.1 (DEAD-box ATP-dependent RNA helicase 22 [Cucurbita moschata])

HSP 1 Score: 737.3 bits (1902), Expect = 8.8e-209
Identity = 416/567 (73.37%), Postives = 435/567 (76.72%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATPVADGIGRDTFYAAEG+SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPVADGIGRDTFYAAEGISWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180
           DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180

Query: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA 240
           TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHV  
Sbjct: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVF 240

Query: 241 S-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIH 300
                   GS  +    +  + R     + R      R+  L +  + +L L     +  
Sbjct: 241 DEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADASSQLTLQDESDIET 300

Query: 301 PLISE----------------------------------------QRRGTRYVWVA---- 360
             ISE                                          R  +Y++VA    
Sbjct: 301 ETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLP 360

Query: 361 --------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQSKSQL 420
                               +  +Y      RLEQRWVEVTVDNQVDELIKAVNQSKSQL
Sbjct: 361 VNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQL 420

Query: 421 RNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVL 480
           RNIDGGAIRTMVFANTVETVEAVANILSVAGTECF YHKDRSLEERSKILADFRENGGVL
Sbjct: 421 RNIDGGAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRENGGVL 480

Query: 481 VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA 489
           VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA
Sbjct: 481 VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA 540

[Close]

BLAST of Carg01758 vs. NCBI nr
Match: XP_023549678.1 (DEAD-box ATP-dependent RNA helicase 22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725.3 bits (1871), Expect = 3.5e-205
Identity = 414/572 (72.38%), Postives = 433/572 (75.70%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLR+PCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQR-----DGDQDLASINKLSLVLCPNVMLCEQV 180
           DVVIAAETGSGKTHGYLVPLINKICNEQR     DGDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180

Query: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
           VQMANTLCDEHGKSLLRVT VCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTTVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240

Query: 241 KHVHAS-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRR 300
           KHV          GS  +    +  + R     + R      R+  L +  + +L L   
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300

Query: 301 LALIHPLISE----------------------------------------QRRGTRYVWV 360
             +    ISE                                          R  +Y++V
Sbjct: 301 SDIETETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFV 360

Query: 361 A------------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQ 420
           A                        +  +Y      RLEQRWVEVTVDNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQ 420

Query: 421 SKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRE 480
           SKSQLRNIDG AIRTMVFANTVETVEAVANILSVAGTECF YHKDRSLEERSKILADFRE
Sbjct: 421 SKSQLRNIDGSAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRE 480

Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 489
           NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR
Sbjct: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 540

[Close]

BLAST of Carg01758 vs. NCBI nr
Match: XP_022997352.1 (DEAD-box ATP-dependent RNA helicase 22 [Cucurbita maxima])

HSP 1 Score: 714.9 bits (1844), Expect = 4.7e-202
Identity = 407/571 (71.28%), Postives = 430/571 (75.31%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLR+PCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATP ADGIGRDTFYAAEGVSWTSLGVSDNVSR+LVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPAADGIGRDTFYAAEGVSWTSLGVSDNVSRSLVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQR-----DGDQDLASINKLSLVLCPNVMLCEQV 180
           DVVIAAETGSGKTHGYLVPLINKICNEQR     DGDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180

Query: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
           VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240

Query: 241 KHVHAS-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRR 300
           KHV          GS  +    +  + R     + R      R+  L +  + +L L   
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300

Query: 301 LALIHPLISE---------------------------------------QRRGTRYVWVA 360
             +    ISE                                         R  +Y++VA
Sbjct: 301 SDIETETISEGEGEGEGEESYEDVDSNNIQDKTEYSSGRVKDWRRAQKSYERSKQYIFVA 360

Query: 361 ------------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQS 420
                                   +  +Y      RLEQRWVEVTVDNQ DELI+AVNQS
Sbjct: 361 ATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQADELIEAVNQS 420

Query: 421 KSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFREN 480
           K+QLRNID GAIRTMVFANTVETVEAVANIL VAGTECF YHKDRSLEERSKILADFRE 
Sbjct: 421 KAQLRNIDDGAIRTMVFANTVETVEAVANILLVAGTECFRYHKDRSLEERSKILADFREK 480

Query: 481 GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRD 489
           GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRD
Sbjct: 481 GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRD 540

[Close]

BLAST of Carg01758 vs. ExPASy Swiss-Prot
Match: Q944S1 (DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 5.5e-105
Identity = 253/558 (45.34%), Postives = 317/558 (56.81%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASS--SKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGT 60
           M+L RS S L+L  ++SS  SKLL      +  +    S+   L  L +   K  R    
Sbjct: 1   MILSRSVSVLHLCGVSSSAPSKLLSQRFKVSFALAYGSSVSFRLSSLNRSDRKWVRGF-- 60

Query: 61  VAASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMS 120
             ASA     +  G DTF+A   VSW SLG+SDNVS AL  +G  RPSL QA C+PSI+S
Sbjct: 61  --ASATEAEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILS 120

Query: 121 GNDVVIAAETGSGKTHGYLVPLINKICNEQRDG-----DQDLASINKLSLVLCPNVMLCE 180
           G DV++AAETGSGKTHGYL P+I+++ N   D      ++    +  +SL+LCPNVMLCE
Sbjct: 121 GKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCE 180

Query: 181 QVVQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLC 240
           QVV+M N L DE G  LLRV AVCG QGWP   PDIIVSTPAALLN IEP R+RR++FL 
Sbjct: 181 QVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLR 240

Query: 241 AVKHV---------------------------------HASGSPSSPTEAVSVV----FR 300
            VK+V                                  A  +   P E  + V      
Sbjct: 241 CVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVSRLAKSNLGRPMEIDASVPQIDLE 300

Query: 301 HRSLPILRRGLIS---------------SRVASLRSRIAPELAL-FRRLALIH------- 360
           +        G IS               +++ S+ +    +    +RR+  I+       
Sbjct: 301 NEDDAEFDEGSISEEEDEEEEEEYLDDIAQMPSVEAEAGSDTKKGWRRVRKIYTRSKQYI 360

Query: 361 ------PLISEQRRG-------TRYVWVA---LPSEYFRLEQRWVEVTVDNQVDELIKAV 420
                 P+  ++  G          VWV+   L     RL+Q+WVEVTVD+QVD LI+AV
Sbjct: 361 FIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALIEAV 420

Query: 421 NQSKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADF 476
                   N +    RTMVFANTVE VEAVA+IL  A  +C+ YHK+  L+ER+ ILADF
Sbjct: 421 K------NNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADF 480

[Close]

BLAST of Carg01758 vs. ExPASy Swiss-Prot
Match: Q6H601 (DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0383400 PE=2 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 1.7e-101
Identity = 233/520 (44.81%), Postives = 309/520 (59.42%), Query Frame = 0


Query: 54  RAVGTVAASAATPVADGIG-RDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAAC 113
           RA+ T AA A    A G G  D F++ E  SW SLGVSD ++ AL  AG+ RPSL+QAAC
Sbjct: 53  RALATAAAEADDAGAGGNGDGDGFFSEESTSWESLGVSDRLASALHGAGLARPSLVQAAC 112

Query: 114 VPSIMSGNDVVIAAETGSGKTHGYLVPLINKICNEQ---RDGD-QDLASIN-KLSLVLCP 173
           +P +++ NDV++AAETGSGKTHGYLVPLI K+C++     DG+ QD+ S +  ++LVLCP
Sbjct: 113 IPHVLTTNDVIVAAETGSGKTHGYLVPLIEKLCSKSISAEDGNSQDVTSGSPNIALVLCP 172

Query: 174 NVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYI---EPN 233
           NVMLCEQVV+MAN+L DE G+ L    AVCG +GWP  +PDI+V+TPAALLNY+   +P 
Sbjct: 173 NVMLCEQVVRMANSLVDESGEPLKSAAAVCGPKGWPTVRPDILVATPAALLNYLFDYDPE 232

Query: 234 RSRRMKFLCAVKHVHASGSP-----SSPTEAVSVVFRHR-SLPILRR------------- 293
           + RR +FL  VK +    +      S   + + ++   R    +L R             
Sbjct: 233 KRRRERFLRNVKFIVFDEADMLLCGSFENQVIRLIHMLRFDEKLLSRMEDSGKEISLGDT 292

Query: 294 -----------------------GLISSRVASL-RSRIAPELALFRRLALIHPLISEQRR 353
                                  GL+  R  ++  + I      +RR+  ++      RR
Sbjct: 293 NEYREDSDSQSAELSADDEENEDGLVQHRPVNVENAHIGAHKKDWRRVRKVY------RR 352

Query: 354 GTRYVWVA--LPSE----------------------YF-----RLEQRWVEVTVDNQVDE 413
             +YV+VA  LP                        Y      RLE+RW+EVT D QV  
Sbjct: 353 SKQYVFVAATLPQSGKKTAGGVLKRMFPNAVWVSGAYLHRHNPRLERRWIEVTADTQVSA 412

Query: 414 LIKAVNQS-KSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERS 473
           L+ AV    K+++ +   G  RTMVF NTV+   +V++IL   G  C  YH+D SLEER+
Sbjct: 413 LLDAVKYGLKNEVHDTKLGPNRTMVFTNTVDAANSVSDILQRVGVPCILYHRDSSLEERA 472

Query: 474 KILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVT 489
           K L  FRENGGVLVCTDAAARG+D+PNV+HVIQA+FA  AVDFLHR+GRT RAGQ G+VT
Sbjct: 473 KNLQSFRENGGVLVCTDAAARGLDVPNVSHVIQAEFAACAVDFLHRVGRTARAGQSGIVT 532

[Close]

BLAST of Carg01758 vs. ExPASy Swiss-Prot
Match: Q5VRY0 (DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.7e-29
Identity = 115/410 (28.05%), Postives = 189/410 (46.10%), Query Frame = 0


Query: 83  SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
           S+  LG+ + V  AL   GI +P+ IQ   VP++++G  VV+ + TGSGKT  YL+PL+ 
Sbjct: 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170

Query: 143 KICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQ-- 202
            +  ++      +      ++VLCP   L EQV ++A ++   H +   R T V G    
Sbjct: 171 LLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSI-SHHAR--FRSTMVSGGSRI 230

Query: 203 -------GWPVYKPDIIVSTPAALLNYIEPNRS--RRMKFLCAVKHVHASGSPSSPTEAV 262
                    PV   D++V TP  +L++I+        +K+L                +  
Sbjct: 231 RPQEDSLNMPV---DMVVGTPGRILDHIKDGNMVYGDIKYLV--------------LDEA 290

Query: 263 SVVFRHRSLPILRRGLISSRVASLRSRIAPE--------LALFRRLALIHPLISEQRRGT 322
             +F     P +R+ L     A L++R A          L        +  LI E+  G 
Sbjct: 291 DTMFDQGFGPDIRKFL-----APLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGI 350

Query: 323 RYV-WVALPSEYFRLEQRWVEVT-VDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTV 382
            ++               +++++  +N+++ L++ +  S ++         + MVF NT+
Sbjct: 351 VHLRTTTFQKRVATARHDFIKLSGSENKLEALLQVLEPSLAK-------GNKVMVFCNTL 410

Query: 383 ETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGG---VLVCTDAAARGVDIPN 442
            +  AV + L+        YH +   EER + L  FR   G    LVCTD AARG+D+ +
Sbjct: 411 NSSRAVDHFLTENQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDL-D 470

Query: 443 VAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRA 469
           V HVI  DF ++++D+LHR GRT R G  G VTS+  K +  L   +  A
Sbjct: 471 VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEEA 487

[Close]

BLAST of Carg01758 vs. ExPASy Swiss-Prot
Match: Q56X76 (DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 2.7e-27
Identity = 102/399 (25.56%), Postives = 186/399 (46.62%), Query Frame = 0


Query: 83  SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
           ++  LG+S+ V  AL    I+ P+ IQ   +P++M    VV+ + TGSGKT  YL+P++ 
Sbjct: 113 NFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQ 172

Query: 143 KICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQGW 202
            +  ++ +  +        ++VLCP   L EQV ++A ++   H      +    G +  
Sbjct: 173 LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSI--SHHARFRSILVSGGSRIR 232

Query: 203 PVYKP-----DIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHASGSPSSPTEAVSVVFRH 262
           P         D++V TP  +L +IE            V             +    +F  
Sbjct: 233 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLV------------LDEADTMFDR 292

Query: 263 RSLPILRRGLISSRVASLRSR---IAPELALFRRLALIHPLISEQRRGTRYVWVA-LPSE 322
              P +R+ L      +L++        L        +  L+ E+ +G  ++  + L  +
Sbjct: 293 GFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKK 352

Query: 323 YFRLEQRWVEVT-VDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILS 382
                  +++++  +++++ L++ +  S ++         + MVF NT+ +  AV + LS
Sbjct: 353 IANARHDFIKLSGGEDKLEALLQVLEPSLAK-------GSKVMVFCNTLNSSRAVDHYLS 412

Query: 383 VAGTECFCYHKDRSLEERSKILADFRENGG---VLVCTDAAARGVDIPNVAHVIQADFAT 442
                   YH +   E+R + L  F++  G    LVCTD AARG+D+ +V HV+  DF  
Sbjct: 413 ENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPK 472

Query: 443 SAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRA 469
           +++D+LHR GRT R G  G VTS+ ++ ++ L A +  A
Sbjct: 473 NSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEA 489

[Close]

BLAST of Carg01758 vs. ExPASy Swiss-Prot
Match: Q6BTL5 (ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DRS1 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 9.6e-25
Identity = 105/402 (26.12%), Postives = 188/402 (46.77%), Query Frame = 0


Query: 83  SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
           ++ SL +S  V + L   G  +PS IQ+AC+P  + G D+V  A TGSGKT  Y++P+I 
Sbjct: 259 TFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPIIE 318

Query: 143 KICNEQRDGDQD----LASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCG 202
           ++  +           LA   +L++ +C       Q V   N      G +L +      
Sbjct: 319 RLLYKPAKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNLNFGLAVGGLNLRQ------ 378

Query: 203 RQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA-----SGSPSSPTEAVSV 262
           ++     +PDI+++TP  L+++I  + S  +  L  +    A      G  +  TE +S+
Sbjct: 379 QEQQLKTRPDIVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEILSL 438

Query: 263 VFRHRSLPILRRGLISSRVASLRSRIAPELALFRRL-ALIHPLISEQRRGTRYVWVALPS 322
           + RH+   +L    +++++  L      +L+L + +  +I P         +   + L  
Sbjct: 439 IPRHKRQTLLYSATMNTKIQDL-----IQLSLQKPVRVMIDP--------PKSAAIKLVQ 498

Query: 323 EYFRLEQRWVEVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILS 382
           E+ R+ +R  +      + +LIK+V+ S+           R +VF    E+   +  IL 
Sbjct: 499 EFVRIRKR--DHLKPALLFQLIKSVDPSQQN---------RIVVFVARKESAHKLRIILG 558

Query: 383 VAGTECFCYHKDRSLEERSKILADFRE-NGGVLVCTDAAARGVDIPNVAHVIQADFATSA 442
           + G      H   + E+R   + DF+     VL+CTD AARG+DIP +  VI  D   + 
Sbjct: 559 LLGMRVSELHGSLTQEQRLASVNDFKNLTVPVLICTDLAARGLDIPKIEIVINYDMPKTH 618

Query: 443 VDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRAENLSQ 474
             +LHR+GRT RAG+ G   +   ++ +D        +++S+
Sbjct: 619 EIYLHRVGRTARAGREGKSITFVGESTQDRAIVKDAIKSISE 630

[Close]

BLAST of Carg01758 vs. ExPASy TrEMBL
Match: A0A6J1GWS3 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita moschata OX=3662 GN=LOC111458282 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 4.2e-209
Identity = 416/567 (73.37%), Postives = 435/567 (76.72%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATPVADGIGRDTFYAAEG+SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPVADGIGRDTFYAAEGISWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180
           DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMAN 180

Query: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHA 240
           TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHV  
Sbjct: 181 TLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVVF 240

Query: 241 S-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRRLALIH 300
                   GS  +    +  + R     + R      R+  L +  + +L L     +  
Sbjct: 241 DEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADASSQLTLQDESDIET 300

Query: 301 PLISE----------------------------------------QRRGTRYVWVA---- 360
             ISE                                          R  +Y++VA    
Sbjct: 301 ETISEGEGEGEGEESYDEDVDSNNIQEKTEYSSRRVKDWRRAQKSYERSKQYIFVAATLP 360

Query: 361 --------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQSKSQL 420
                               +  +Y      RLEQRWVEVTVDNQVDELIKAVNQSKSQL
Sbjct: 361 VNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQVDELIKAVNQSKSQL 420

Query: 421 RNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRENGGVL 480
           RNIDGGAIRTMVFANTVETVEAVANILSVAGTECF YHKDRSLEERSKILADFRENGGVL
Sbjct: 421 RNIDGGAIRTMVFANTVETVEAVANILSVAGTECFRYHKDRSLEERSKILADFRENGGVL 480

Query: 481 VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA 489
           VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA
Sbjct: 481 VCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAA 540

[Close]

BLAST of Carg01758 vs. ExPASy TrEMBL
Match: A0A6J1K4R5 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita maxima OX=3661 GN=LOC111492263 PE=4 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 2.3e-202
Identity = 407/571 (71.28%), Postives = 430/571 (75.31%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLR+PCSKQSRAVGTVA
Sbjct: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRQPCSKQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAATP ADGIGRDTFYAAEGVSWTSLGVSDNVSR+LVSAGIQRPSLIQAACVPSIMSGN
Sbjct: 61  ASAATPAADGIGRDTFYAAEGVSWTSLGVSDNVSRSLVSAGIQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQR-----DGDQDLASINKLSLVLCPNVMLCEQV 180
           DVVIAAETGSGKTHGYLVPLINKICNEQR     DGDQDLASINKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRDDKLTDGDQDLASINKLSLVLCPNVMLCEQV 180

Query: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
           VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240

Query: 241 KHVHAS-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRR 300
           KHV          GS  +    +  + R     + R      R+  L +  + +L L   
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPERLMELEADPSSQLTLQDE 300

Query: 301 LALIHPLISE---------------------------------------QRRGTRYVWVA 360
             +    ISE                                         R  +Y++VA
Sbjct: 301 SDIETETISEGEGEGEGEESYEDVDSNNIQDKTEYSSGRVKDWRRAQKSYERSKQYIFVA 360

Query: 361 ------------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQS 420
                                   +  +Y      RLEQRWVEVTVDNQ DELI+AVNQS
Sbjct: 361 ATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVTVDNQADELIEAVNQS 420

Query: 421 KSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFREN 480
           K+QLRNID GAIRTMVFANTVETVEAVANIL VAGTECF YHKDRSLEERSKILADFRE 
Sbjct: 421 KAQLRNIDDGAIRTMVFANTVETVEAVANILLVAGTECFRYHKDRSLEERSKILADFREK 480

Query: 481 GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRD 489
           GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRD
Sbjct: 481 GGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANRD 540

[Close]

BLAST of Carg01758 vs. ExPASy TrEMBL
Match: A0A5A7SV31 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00700 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.2e-179
Identity = 374/589 (63.50%), Postives = 408/589 (69.27%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRS SAL+LERL  SSKLLFSFKNSNLLVP+SCSIRIGLVCL++PCS+QSRAVGTVA
Sbjct: 1   MLLYRSVSALHLERLKLSSKLLFSFKNSNLLVPNSCSIRIGLVCLKQPCSRQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAA+  ADGIG+DTFYAAEGVSWTSLGVSD VSRAL S G+QRPSLIQAACVPSIMSGN
Sbjct: 61  ASAASTAADGIGKDTFYAAEGVSWTSLGVSDTVSRALGSVGMQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQ-----RDGDQDLASINKLSLVLCPNVMLCEQV 180
           DVVIAAETGSGKTHGYLVPLINKIC+E       DGDQDLAS+NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICSEHGEDKLTDGDQDLASLNKLSLVLCPNVMLCEQV 180

Query: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
           VQMAN LCDEHGKSLLRVTA+CGRQGWPV+KPDI+VSTPAALLNYIEPNRSRR  FL AV
Sbjct: 181 VQMANALCDEHGKSLLRVTAICGRQGWPVHKPDIVVSTPAALLNYIEPNRSRRSAFLRAV 240

Query: 241 KHVHAS-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRR 300
           KHV          GS  +    +  + R     + R      R+  L +    +L +   
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKEFPERLMELEADPLSQLIVQDE 300

Query: 301 LALIHPLISE-------------------------------------------------- 360
             L     SE                                                  
Sbjct: 301 DDLQTETTSEGEGEKEEEGEEEGEGEEEGEGEGEGEESYNEVESNNIQDETECVSGKVKH 360

Query: 361 -------QRRGTRYVWVA------------------------LPSEYF-----RLEQRWV 420
                    R  +Y++VA                        +  +Y      RLEQRWV
Sbjct: 361 WRRVRKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHNPRLEQRWV 420

Query: 421 EVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYH 480
           EV+ DNQVDELIKAVNQSKSQLR  D G IRTMVFANTVETVEAVANIL  AG ECF YH
Sbjct: 421 EVSTDNQVDELIKAVNQSKSQLRVPDDGVIRTMVFANTVETVEAVANILLGAGKECFRYH 480

Query: 481 KDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTG 489
           KDRSLEERSKILADFRE GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRTG
Sbjct: 481 KDRSLEERSKILADFREEGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTG 540

[Close]

BLAST of Carg01758 vs. ExPASy TrEMBL
Match: A0A1S3BFF8 (DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo OX=3656 GN=LOC103489039 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 1.2e-179
Identity = 374/589 (63.50%), Postives = 408/589 (69.27%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRS SAL+LERL  SSKLLFSFKNSNLLVP+SCSIRIGLVCL++PCS+QSRAVGTVA
Sbjct: 1   MLLYRSVSALHLERLKLSSKLLFSFKNSNLLVPNSCSIRIGLVCLKQPCSRQSRAVGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           ASAA+  ADGIG+DTFYAAEGVSWTSLGVSD VSRAL S G+QRPSLIQAACVPSIMSGN
Sbjct: 61  ASAASTAADGIGKDTFYAAEGVSWTSLGVSDTVSRALGSVGMQRPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQ-----RDGDQDLASINKLSLVLCPNVMLCEQV 180
           DVVIAAETGSGKTHGYLVPLINKIC+E       DGDQDLAS+NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINKICSEHGEDKLTDGDQDLASLNKLSLVLCPNVMLCEQV 180

Query: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
           VQMAN LCDEHGKSLLRVTA+CGRQGWPV+KPDI+VSTPAALLNYIEPNRSRR  FL AV
Sbjct: 181 VQMANALCDEHGKSLLRVTAICGRQGWPVHKPDIVVSTPAALLNYIEPNRSRRSAFLRAV 240

Query: 241 KHVHAS-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRR 300
           KHV          GS  +    +  + R     + R      R+  L +    +L +   
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKEFPERLMELEADPLSQLIVQDE 300

Query: 301 LALIHPLISE-------------------------------------------------- 360
             L     SE                                                  
Sbjct: 301 DDLQTETTSEGEGEKEEEGEEEGEGEEEGEGEGEGEESYNEVESNNIQDETECVSGKVKH 360

Query: 361 -------QRRGTRYVWVA------------------------LPSEYF-----RLEQRWV 420
                    R  +Y++VA                        +  +Y      RLEQRWV
Sbjct: 361 WRRVRKSYERSKQYIFVAATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHNPRLEQRWV 420

Query: 421 EVTVDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYH 480
           EV+ DNQVDELIKAVNQSKSQLR  D G IRTMVFANTVETVEAVANIL  AG ECF YH
Sbjct: 421 EVSTDNQVDELIKAVNQSKSQLRVPDDGVIRTMVFANTVETVEAVANILLGAGKECFRYH 480

Query: 481 KDRSLEERSKILADFRENGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTG 489
           KDRSLEERSKILADFRE GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRTG
Sbjct: 481 KDRSLEERSKILADFREEGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTG 540

[Close]

BLAST of Carg01758 vs. ExPASy TrEMBL
Match: A0A6J1DBC8 (DEAD-box ATP-dependent RNA helicase 22 OS=Momordica charantia OX=3673 GN=LOC111019135 PE=4 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 1.5e-177
Identity = 369/572 (64.51%), Postives = 406/572 (70.98%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASSSKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGTVA 60
           MLLYRSASAL+LERLA  SKLLFSFKN N LV +SCSIRIGLV LR+ CS++SRA GTVA
Sbjct: 1   MLLYRSASALHLERLALPSKLLFSFKNYNSLVSTSCSIRIGLVSLRQRCSEKSRAAGTVA 60

Query: 61  ASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGN 120
           AS A+  A+G GRDTF+AAEGVSWTSLGVSDNVSRALVS+GIQ PSLIQAACVPSIMSGN
Sbjct: 61  ASTASTAAEGTGRDTFFAAEGVSWTSLGVSDNVSRALVSSGIQMPSLIQAACVPSIMSGN 120

Query: 121 DVVIAAETGSGKTHGYLVPLINKICNEQRD-----GDQDLASINKLSLVLCPNVMLCEQV 180
           DVVIAAETGSGKTHGYLVPLIN+IC+E  D      DQDLAS NKLSLVLCPNVMLCEQV
Sbjct: 121 DVVIAAETGSGKTHGYLVPLINRICSEHGDNKLTGSDQDLASFNKLSLVLCPNVMLCEQV 180

Query: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLCAV 240
           VQMANTLCDEHGKSLLRVTAVCGRQGWP+++PDIIVSTPAALLNYIEPNRSRR+ FL AV
Sbjct: 181 VQMANTLCDEHGKSLLRVTAVCGRQGWPIHEPDIIVSTPAALLNYIEPNRSRRLDFLRAV 240

Query: 241 KHVHAS-------GSPSSPTEAVSVVFRHRSLPILRRGLISSRVASLRSRIAPELALFRR 300
           KHV          GS  +    +  + R     + R      R+  L +  + EL L   
Sbjct: 241 KHVVFDEADMLLVGSFQNKVIRLINLLRFEEKLLSRSKESPKRLVELEADPSSELILQDE 300

Query: 301 LALIHPLISE----------------------------------------QRRGTRYVWV 360
             L    ISE                                          R  +Y++V
Sbjct: 301 NDLQTETISEGEEDGEGEESYEEDVDSNDIQEQTESVSGRVKDWRRVRKFYERSKQYIFV 360

Query: 361 A------------------------LPSEYF-----RLEQRWVEVTVDNQVDELIKAVNQ 420
           A                        +  +Y      RLEQRWVEV++DNQVDELIKAVNQ
Sbjct: 361 AATLPVNGKKTAGAVLRKMFPDASWVSGKYLHCHSPRLEQRWVEVSLDNQVDELIKAVNQ 420

Query: 421 SKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRE 480
            KS+ RN DGGAIRTMVFANTVETVEAV N+L  AG ECF YHKDRSLEERSKILADFRE
Sbjct: 421 PKSKQRNPDGGAIRTMVFANTVETVEAVDNVLLRAGIECFRYHKDRSLEERSKILADFRE 480

Query: 481 NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKANR 489
            GGV VCTDAAARGVDIPNV+HVIQADFATSAVDFLHRIGRTGRAGQ GLVTS+YTKANR
Sbjct: 481 KGGVFVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTGRAGQYGLVTSLYTKANR 540

[Close]

BLAST of Carg01758 vs. TAIR 10
Match: AT1G59990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 382.9 bits (982), Expect = 3.9e-106
Identity = 253/558 (45.34%), Postives = 317/558 (56.81%), Query Frame = 0


Query: 1   MLLYRSASALYLERLASS--SKLLFSFKNSNLLVPSSCSIRIGLVCLRKPCSKQSRAVGT 60
           M+L RS S L+L  ++SS  SKLL      +  +    S+   L  L +   K  R    
Sbjct: 1   MILSRSVSVLHLCGVSSSAPSKLLSQRFKVSFALAYGSSVSFRLSSLNRSDRKWVRGF-- 60

Query: 61  VAASAATPVADGIGRDTFYAAEGVSWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMS 120
             ASA     +  G DTF+A   VSW SLG+SDNVS AL  +G  RPSL QA C+PSI+S
Sbjct: 61  --ASATEAEVEKKGNDTFFADHTVSWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILS 120

Query: 121 GNDVVIAAETGSGKTHGYLVPLINKICNEQRDG-----DQDLASINKLSLVLCPNVMLCE 180
           G DV++AAETGSGKTHGYL P+I+++ N   D      ++    +  +SL+LCPNVMLCE
Sbjct: 121 GKDVIVAAETGSGKTHGYLAPIIDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCE 180

Query: 181 QVVQMANTLCDEHGKSLLRVTAVCGRQGWPVYKPDIIVSTPAALLNYIEPNRSRRMKFLC 240
           QVV+M N L DE G  LLRV AVCG QGWP   PDIIVSTPAALLN IEP R+RR++FL 
Sbjct: 181 QVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLR 240

Query: 241 AVKHV---------------------------------HASGSPSSPTEAVSVV----FR 300
            VK+V                                  A  +   P E  + V      
Sbjct: 241 CVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVSRLAKSNLGRPMEIDASVPQIDLE 300

Query: 301 HRSLPILRRGLIS---------------SRVASLRSRIAPELAL-FRRLALIH------- 360
           +        G IS               +++ S+ +    +    +RR+  I+       
Sbjct: 301 NEDDAEFDEGSISEEEDEEEEEEYLDDIAQMPSVEAEAGSDTKKGWRRVRKIYTRSKQYI 360

Query: 361 ------PLISEQRRG-------TRYVWVA---LPSEYFRLEQRWVEVTVDNQVDELIKAV 420
                 P+  ++  G          VWV+   L     RL+Q+WVEVTVD+QVD LI+AV
Sbjct: 361 FIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALIEAV 420

Query: 421 NQSKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERSKILADF 476
                   N +    RTMVFANTVE VEAVA+IL  A  +C+ YHK+  L+ER+ ILADF
Sbjct: 421 K------NNNNTNTERTMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADF 480

[Close]

BLAST of Carg01758 vs. TAIR 10
Match: AT4G09730.1 (RH39 )

HSP 1 Score: 124.8 bits (312), Expect = 1.9e-28
Identity = 102/399 (25.56%), Postives = 186/399 (46.62%), Query Frame = 0


Query: 83  SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
           ++  LG+S+ V  AL    I+ P+ IQ   +P++M    VV+ + TGSGKT  YL+P++ 
Sbjct: 113 NFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQ 172

Query: 143 KICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQGW 202
            +  ++ +  +        ++VLCP   L EQV ++A ++   H      +    G +  
Sbjct: 173 LMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSI--SHHARFRSILVSGGSRIR 232

Query: 203 PVYKP-----DIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHASGSPSSPTEAVSVVFRH 262
           P         D++V TP  +L +IE            V             +    +F  
Sbjct: 233 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLV------------LDEADTMFDR 292

Query: 263 RSLPILRRGLISSRVASLRSR---IAPELALFRRLALIHPLISEQRRGTRYVWVA-LPSE 322
              P +R+ L      +L++        L        +  L+ E+ +G  ++  + L  +
Sbjct: 293 GFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKK 352

Query: 323 YFRLEQRWVEVT-VDNQVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILS 382
                  +++++  +++++ L++ +  S ++         + MVF NT+ +  AV + LS
Sbjct: 353 IANARHDFIKLSGGEDKLEALLQVLEPSLAK-------GSKVMVFCNTLNSSRAVDHYLS 412

Query: 383 VAGTECFCYHKDRSLEERSKILADFRENGG---VLVCTDAAARGVDIPNVAHVIQADFAT 442
                   YH +   E+R + L  F++  G    LVCTD AARG+D+ +V HV+  DF  
Sbjct: 413 ENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPK 472

Query: 443 SAVDFLHRIGRTGRAGQCGLVTSMYTKANRDLVAAVRRA 469
           +++D+LHR GRT R G  G VTS+ ++ ++ L A +  A
Sbjct: 473 NSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEA 489

[Close]

BLAST of Carg01758 vs. TAIR 10
Match: AT2G42520.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-25
Identity = 103/371 (27.76%), Postives = 168/371 (45.28%), Query Frame = 0


Query: 104 RPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLINKICNEQR-DGDQDLASINKLS 163
           +P+ +Q   +P ++ G D++  A+TGSGKT  +  P+I+ I  +Q     +   ++  L+
Sbjct: 181 KPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLA 240

Query: 164 LVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQGWPVYKP--------DIIVSTP 223
           ++L P   L  Q+   A     + G     V  V    G P+ +         DI+V+TP
Sbjct: 241 VILSPTRELASQIHDEAKKFSYQTG-----VKVVVAYGGTPINQQLRELERGVDILVATP 300

Query: 224 AALLNYIEPNR--SRRMKFLCAVKHVHASGSPSSPTEAVSVVFRHRSLPILRRGLISSRV 283
             L + +E  R   + ++FL   +          P   +  +     +P   RG+  + +
Sbjct: 301 GRLNDLLERARVSMQMIRFLALDEADRMLDMGFEP--QIRKIVEQMDMP--PRGVRQTLL 360

Query: 284 ASLRSRIAPELALFRRLALIHPLISEQRRGTRYVWVALPSEYFRLEQRWVEVTVDNQVDE 343
            S         A F R   I  L ++      ++ V        L  + VE  +D+  D+
Sbjct: 361 FS---------ATFPR--EIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDS--DK 420

Query: 344 LIKAVNQSKSQLRN-IDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLEERS 403
               ++   +Q  N I G    T+VF  T    +++ N L + G      H DR+ +ER 
Sbjct: 421 RSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQERE 480

Query: 404 KILADFRE-NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQCGLV 462
             L  F+     +LV TD AARG+DIP+VAHV+  D      D++HRIGRTGRAG+ GL 
Sbjct: 481 VALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 529

[Close]

BLAST of Carg01758 vs. TAIR 10
Match: AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 3.4e-25
Identity = 104/371 (28.03%), Postives = 166/371 (44.74%), Query Frame = 0


Query: 104 RPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLINKICNEQR-DGDQDLASINKLS 163
           +P+ +Q   +P + +G D++  A+TGSGKT  +  P+I+ I  +Q  +  + +  +  L+
Sbjct: 168 KPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLA 227

Query: 164 LVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVCGRQGWPVYKP--------DIIVSTP 223
           ++L P   L  Q+   A     + G     V  V    G PV +         DI+V+TP
Sbjct: 228 VILSPTRELACQIHDEARKFSYQTG-----VKVVVAYGGTPVNQQIRELERGVDILVATP 287

Query: 224 AALLNYIEPNR--SRRMKFLCAVKHVHASGSPSSPTEAVSVVFRHRSLPILRRGLISSRV 283
             L + +E  R   + ++FL   +          P     V       P +R+ ++ S  
Sbjct: 288 GRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS-- 347

Query: 284 ASLRSRIAPELALFRRLALIHPLISEQRRGTRYVWVALPSEYFRLEQRWVEVTVD----N 343
                      A F R   I  L S+      ++ V        L  + VE   D    +
Sbjct: 348 -----------ATFPR--EIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRS 407

Query: 344 QVDELIKAVNQSKSQLRNIDGGAIRTMVFANTVETVEAVANILSVAGTECFCYHKDRSLE 403
            + +L+ A  ++ +Q     G    T+VF  T +  +++ N L + G      H DRS +
Sbjct: 408 HLMDLLHAQRENGNQ-----GKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQ 467

Query: 404 ERSKILADFRE-NGGVLVCTDAAARGVDIPNVAHVIQADFATSAVDFLHRIGRTGRAGQC 459
           ER   L  F+     +LV TD AARG+DIP+VAHV+  D      D++HRIGRTGRAG  
Sbjct: 468 EREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNS 513

[Close]

BLAST of Carg01758 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-24
Identity = 103/400 (25.75%), Postives = 175/400 (43.75%), Query Frame = 0


Query: 83  SWTSLGVSDNVSRALVSAGIQRPSLIQAACVPSIMSGNDVVIAAETGSGKTHGYLVPLIN 142
           S+  +G  D V   +  AG   P+ IQ+   P  M G D++  AETGSGKT  YL+P I 
Sbjct: 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159

Query: 143 KICNEQRDGDQDLASINKLSLVLCPNVMLCEQVVQMANTLCDEHGKSLLRVTAVC----- 202
            +  +      D      + LVL P   L  Q+ Q A+        S ++ T +      
Sbjct: 160 HVNAQPMLAHGD----GPIVLVLAPTRELAVQIQQEASKF---GSSSKIKTTCIYGGVPK 219

Query: 203 GRQGWPVYK-PDIIVSTPAALLNYIEPNRSRRMKFLCAVKHVHASGSPSSPTEAVSVVFR 262
           G Q   + K  +I+++TP  L++ +E N +   +                    V+ +  
Sbjct: 220 GPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRR--------------------VTYLVL 279

Query: 263 HRSLPILRRGLISSRVASLRSRIAPELALFRRLALIHPLISEQRRGTRYVWVALPSEYFR 322
             +  +L  G    ++  + S I P+                  R T Y     P E  +
Sbjct: 280 DEADRMLDMG-FDPQIRKIVSHIRPD------------------RQTLYWSATWPKEVEQ 339

Query: 323 LEQRWV-----------EVTVDNQVDELIKAVNQSKSQ------LRNIDGGAIRTMVFAN 382
           L ++++           ++  +  + +++  +++S+        L +I  G+ R +VF +
Sbjct: 340 LSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGS-RILVFLD 399

Query: 383 TVETVEAVANILSVAGTECFCYHKDRSLEERSKILADFRE-NGGVLVCTDAAARGVDIPN 442
           T +  + +   L + G      H D+S  ER  +L++FR     ++  TD AARG+D+ +
Sbjct: 400 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKD 452

Query: 443 VAHVIQADFATSAVDFLHRIGRTGRAGQCGLVTSMYTKAN 459
           V +VI  DF  S  D++HRIGRTGRAG  G   + +T AN
Sbjct: 460 VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVAN 452

The following BLAST results are available for this feature:

BLAST of Carg01758 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7032160.1	6.6e-273	100.00	DEAD-box ATP-dependent RNA helicase 22, partial [Cucurbita argyrosperma subsp. a...	[more]
KAG6601380.1	6.7e-209	73.54	DEAD-box ATP-dependent RNA helicase 22, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022956592.1	8.8e-209	73.37	DEAD-box ATP-dependent RNA helicase 22 [Cucurbita moschata]	[more]
XP_023549678.1	3.5e-205	72.38	DEAD-box ATP-dependent RNA helicase 22 [Cucurbita pepo subsp. pepo]	[more]
XP_022997352.1	4.7e-202	71.28	DEAD-box ATP-dependent RNA helicase 22 [Cucurbita maxima]	[more]

BLAST of Carg01758 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944S1	5.5e-105	45.34	DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 P...	[more]
Q6H601	1.7e-101	44.81	DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5VRY0	1.7e-29	28.05	DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q56X76	2.7e-27	25.56	DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 P...	[more]
Q6BTL5	9.6e-25	26.12	ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CB...	[more]

BLAST of Carg01758 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GWS3	4.2e-209	73.37	DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1K4R5	2.3e-202	71.28	DEAD-box ATP-dependent RNA helicase 22 OS=Cucurbita maxima OX=3661 GN=LOC1114922...	[more]
A0A5A7SV31	1.2e-179	63.50	DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3BFF8	1.2e-179	63.50	DEAD-box ATP-dependent RNA helicase 22 OS=Cucumis melo OX=3656 GN=LOC103489039 P...	[more]
A0A6J1DBC8	1.5e-177	64.51	DEAD-box ATP-dependent RNA helicase 22 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Carg01758 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59990.1	3.9e-106	45.34	DEA(D/H)-box RNA helicase family protein	[more]
AT4G09730.1	1.9e-28	25.56	RH39	[more]
AT2G42520.1	1.2e-25	27.76	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G58570.1	3.4e-25	28.03	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G55150.1	1.7e-24	25.75	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 365..445 e-value: 4.0E-25 score: 99.5
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 353..445 e-value: 3.2E-21 score: 75.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 329..488 score: 17.380501
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 101..315 e-value: 2.7E-11 score: 53.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 113..270 score: 13.495598
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 73..239 e-value: 3.3E-31 score: 110.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 317..481 e-value: 3.7E-40 score: 140.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 114..456
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 108..227 e-value: 1.2E-16 score: 60.9
None	No IPR available	PANTHER	PTHR47958:SF63	DEAD-BOX ATP-DEPENDENT RNA HELICASE 22	coord: 312..473
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 312..473
None	No IPR available	PANTHER	PTHR47958:SF63	DEAD-BOX ATP-DEPENDENT RNA HELICASE 22	coord: 46..238
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 46..238
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 317..454 e-value: 9.5671E-41 score: 140.72
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 82..110 score: 8.993849

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01758-RA	Carg01758-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity