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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTATTTGATGAACTTTTTCATTCAACGAATCGCCGCCGCAGATACAAATCTTCACCATTCGCCGACACAAAAGCGGCAGAGGTGAAGAAAACTCGATCATCGTCATCTTAGGTAAAAAGTAACTTGTTCTTCTTTTTCTCTTTACTTTATTACGATTCTTTCCAGGTTGCTCGAAGTTTTCCCCAAATTTGATCCAATGGCGATGCCATCCCCATCTTTTGCTATGAAGTCAAAAGTTGTGTTAGCTGAATCAAACAGTATTGAACTCTCCTTTTACTTTACTTTTGTGGATTTAAAGAGTAGATTGATAATCGGACACGTATTTCGTTGATATTCCAGAATCTAACAAATCCCAATAGCTAATCGAGTTTCAAACAGGGAATGCCCTTTTTAAGCTCTACAGAATCCTTTCAGCAGATTGTATTCCTTTTTCTTCATTGATTGCTGGAATGAAATCTTCTGCTATATCTCCTTGTGGCCATTATTTGCAATTTTTCCAAGCTTTTTTTGTTCATAATGGGTGTGTGAATTTGAAATATAATAATCGGATAAAATCCACCACCTCCTCTGCCACTTTCAGAAGAAAAAAAGTAATAATAAAAGAGTTTTCCAGCAGATATTGCCTTGAAAAAGTGGGAGGTGACACAAGGAGCAGTATATTTAAAAACCTCCACCCAATTGCACATATTCTCTTCTTGACACCAAAACCAGACCCTTTCTGCAAAAAAATGTATATTATTTTGTAG mRNA sequence ATGTATTTGATGAACTTTTTCATTCAACGAATCGCCGCCGCAGATACAAATCTTCACCATTCGCCGACACAAAAGCGGCAGAGATATTGCCTTGAAAAAGTGGGAGGTGACACAAGGAGCAGTATATTTAAAAACCTCCACCCAATTGCACATATTCTCTTCTTGACACCAAAACCAGACCCTTTCTGCAAAAAAATGTATATTATTTTGTAG Coding sequence (CDS) ATGTATTTGATGAACTTTTTCATTCAACGAATCGCCGCCGCAGATACAAATCTTCACCATTCGCCGACACAAAAGCGGCAGAGATATTGCCTTGAAAAAGTGGGAGGTGACACAAGGAGCAGTATATTTAAAAACCTCCACCCAATTGCACATATTCTCTTCTTGACACCAAAACCAGACCCTTTCTGCAAAAAAATGTATATTATTTTGTAG Protein sequence MYLMNFFIQRIAAADTNLHHSPTQKRQRYCLEKVGGDTRSSIFKNLHPIAHILFLTPKPDPFCKKMYIIL
Homology
BLAST of Carg01209 vs. NCBI nr
Match: KAG7027795.1 (hypothetical protein SDJN02_08972, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 150.6 bits (379), Expect = 5.0e-33 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MYLMNFFIQRIAAADTNLHHSPTQKRQRYCLEKVGGDTRSSIFKNLHPIAHILFLTPKPD 60
MYLMNFFIQRIAAADTNLHHSPTQKRQRYCLEKVGGDTRSSIFKNLHPIAHILFLTPKPD
Sbjct: 1 MYLMNFFIQRIAAADTNLHHSPTQKRQRYCLEKVGGDTRSSIFKNLHPIAHILFLTPKPD 60
Query: 61 PFCKKMYIIL 71
PFCKKMYIIL
Sbjct: 61 PFCKKMYIIL 70
BLAST of Carg01209 vs. NCBI nr
Match: XP_008448536.1 (PREDICTED: histidine kinase 1 isoform X1 [Cucumis melo]) HSP 1 Score: 62.8 bits (151), Expect = 1.4e-06 Identity = 32/46 (69.57%), Postives = 32/46 (69.57%), Query Frame = 0
Query: 26 RQRYCLEKVGGDTRSSIFKNLHPIAHILFL------TPKPDPFCKK 66
R CLEKVG D SSIFKNLHPIAHILFL TPKP FCKK
Sbjct: 25 RYASCLEKVGSDKGSSIFKNLHPIAHILFLTHTLRFTPKPGLFCKK 70
BLAST of Carg01209 vs. ExPASy TrEMBL
Match: A0A1S3BKS9 (histidine kinase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490686 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 6.7e-07 Identity = 32/46 (69.57%), Postives = 32/46 (69.57%), Query Frame = 0
Query: 26 RQRYCLEKVGGDTRSSIFKNLHPIAHILFL------TPKPDPFCKK 66
R CLEKVG D SSIFKNLHPIAHILFL TPKP FCKK
Sbjct: 25 RYASCLEKVGSDKGSSIFKNLHPIAHILFLTHTLRFTPKPGLFCKK 70
BLAST of Carg01209 vs. ExPASy TrEMBL
Match: A0A6J1HNC3 (histidine kinase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465173 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.0e-04 Identity = 27/41 (65.85%), Postives = 28/41 (68.29%), Query Frame = 0
Query: 26 RQRYCLEKVGGDTRSSIFKNLHPIAHILFLT-PKPDPFCKK 66
R CLEKVG D SSIFKNLHP AHILFL K PF +K
Sbjct: 16 RYASCLEKVGDDNGSSIFKNLHPFAHILFLIYNKTRPFLQK 56
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7027795.1 | 5.0e-33 | 100.00 | hypothetical protein SDJN02_08972, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| XP_008448536.1 | 1.4e-06 | 69.57 | PREDICTED: histidine kinase 1 isoform X1 [Cucumis melo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3BKS9 | 6.7e-07 | 69.57 | histidine kinase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490686 PE=4 SV=1 | [more] |
| A0A6J1HNC3 | 9.0e-04 | 65.85 | histidine kinase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465173 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0048856 |
anatomical structure development |
| biological_process |
GO:0009987 |
cellular process |
| biological_process |
GO:0050896 |
response to stimulus |
| molecular_function |
GO:0004672 |
protein kinase activity |
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