Homology
BLAST of Carg01023 vs. NCBI nr
Match:
KAG7027978.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 830.9 bits (2145), Expect = 4.8e-237
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 1 MTNAKPTSLQISVPASALYPWVLQAIRRNDGMNYGAYGRFIQHVPASSSSASATASRSSC 60
MTNAKPTSLQISVPASALYPWVLQAIRRNDGMNYGAYGRFIQHVPASSSSASATASRSSC
Sbjct: 1 MTNAKPTSLQISVPASALYPWVLQAIRRNDGMNYGAYGRFIQHVPASSSSASATASRSSC 60
Query: 61 SMFCRSREFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLFNLISMDAKPD 120
SMFCRSREFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLFNLISMDAKPD
Sbjct: 61 SMFCRSREFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLFNLISMDAKPD 120
Query: 121 KFKFIVSFFDEGLSLSFLCLCSDTRGVISWLAKIVFDRMPARDIVFECDKCLRRMRSHCA 180
KFKFIVSFFDEGLSLSFLCLCSDTRGVISWLAKIVFDRMPARDIVFECDKCLRRMRSHCA
Sbjct: 121 KFKFIVSFFDEGLSLSFLCLCSDTRGVISWLAKIVFDRMPARDIVFECDKCLRRMRSHCA 180
Query: 181 MISDYMTEYYDTCERSSHLLTFCNTKDGNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQ 240
MISDYMTEYYDTCERSSHLLTFCNTKDGNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQ
Sbjct: 181 MISDYMTEYYDTCERSSHLLTFCNTKDGNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQ 240
Query: 241 FKGRSLIIWTAIISAYAANGGANVALSFFYEILTNGIRPDSVAFTPVCSCAHSGELDEAW 300
FKGRSLIIWTAIISAYAANGGANVALSFFYEILTNGIRPDSVAFTPVCSCAHSGELDEAW
Sbjct: 241 FKGRSLIIWTAIISAYAANGGANVALSFFYEILTNGIRPDSVAFTPVCSCAHSGELDEAW 300
Query: 301 KIFNVLLPEYGIQPLIEHYACMVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASV 360
KIFNVLLPEYGIQPLIEHYACMVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASV
Sbjct: 301 KIFNVLLPEYGIQPLIEHYACMVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASV 360
Query: 361 AGDVELGKCVFDSLLDTEPENTGNNIIMDNLYSLFGRWKKSG 403
AGDVELGKCVFDSLLDTEPENTGNNIIMDNLYSLFGRWKKSG
Sbjct: 361 AGDVELGKCVFDSLLDTEPENTGNNIIMDNLYSLFGRWKKSG 402
BLAST of Carg01023 vs. NCBI nr
Match:
KAG6596437.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 386.7 bits (992), Expect = 2.4e-103
Identity = 204/278 (73.38%), Postives = 215/278 (77.34%), Query Frame = 0
Query: 133 LSLSFLCLCSDTRGVISWLAKIVFDRMPARDIVFECDKC---LRRMRSHCAMISD----- 192
L + +C C G + ++ ++ F+ MP +D V D + + S C I
Sbjct: 65 LEMPTMCSC----GSLDYVWEL-FEEMPEKDEVTLRDDIGLHEQPINSTCRYILSNAVGW 124
Query: 193 YMTEYYDTCERSSHLLTFCNTKDGNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGR 252
TEYYDTCERSSHLLTFCNTKDG ARLVCDQFKGR
Sbjct: 125 LQTEYYDTCERSSHLLTFCNTKDG-------------------------ARLVCDQFKGR 184
Query: 253 SLIIWTAIISAYAANGGANVALSFFYEILTNGIRPDSVAFTPVCSCAHSGELDEAWKIFN 312
SLIIWTAIISAYAANGGANVALSFFYEILTNGIRPDSVAFTPVCSCAHSGELDEAWKIFN
Sbjct: 185 SLIIWTAIISAYAANGGANVALSFFYEILTNGIRPDSVAFTPVCSCAHSGELDEAWKIFN 244
Query: 313 VLLPEYGIQPLIEHYACMVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDV 372
VLLPEYGIQPLIEHYACMVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDV
Sbjct: 245 VLLPEYGIQPLIEHYACMVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDV 304
Query: 373 ELGKCVFDSLLDTEPENTGNNIIMDNLYSLFGRWKKSG 403
ELGKCVFDSLLDTEPENTGNNIIMDNLYSLFGRWKKSG
Sbjct: 305 ELGKCVFDSLLDTEPENTGNNIIMDNLYSLFGRWKKSG 312
BLAST of Carg01023 vs. NCBI nr
Match:
XP_022145703.1 (pentatricopeptide repeat-containing protein At2g37310 [Momordica charantia])
HSP 1 Score: 337.0 bits (863), Expect = 2.2e-88
Identity = 239/588 (40.65%), Postives = 281/588 (47.79%), Query Frame = 0
Query: 10 QISVPASALYPWVLQAIRRNDGMNYGAYGRFIQH----------------VPASSSSASA 69
QIS+PA A+ PW LQAIRR DGMNY AYGR IQH + S +
Sbjct: 3 QISIPAGAVIPWALQAIRRADGMNYAAYGRLIQHCADRRFLRLGKQLHARLVLLSVTPDN 62
Query: 70 TASRSSCSMFCRS---REFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLF 129
+ + +S R+ + G+ I+ W L + YT HNM SDMLKLF SL
Sbjct: 63 FLGSKLIAFYSKSGSLRDAYNVFGNISHKNIFS-WNAL-FISYTLHNMHSDMLKLFSSLV 122
Query: 130 NLISMDAKPDKFKFIV-------SFFDEGLSLSFLC------LCSD---TRGVISW---- 189
N +MD KPDKF SF D L+ C L SD ++++
Sbjct: 123 NSNAMDVKPDKFTITCVLKALASSFTDSILAKEVHCFVLRRGLESDIFVVNALVTYYSRC 182
Query: 190 ----LAKIVFDRMPARDIVF---------------ECDKCLRRMRSHCAMISDYMT--EY 249
LA+IVF RMP RDIV EC + + M S + + +T
Sbjct: 183 EEVVLARIVFGRMPERDIVSWNAMVAGFSQGGFYEECKELFKEMLSSVELKPNALTAVSV 242
Query: 250 YDTCERSSHLL------------------TFCNT-------------------------- 309
C +S+ L+ + CN
Sbjct: 243 LQACAQSNDLIFGMEVHRFVNESQIEMDVSLCNAVIGLYAKCGSLDYARELFEEMPEKDE 302
Query: 310 ----------------------------------------------KDG----------- 369
+DG
Sbjct: 303 VTYGSMISGYMVHGSVNQAMDLFQELKKPALSTWNAVISGLVQNNQQDGVLDIFRAMQSH 362
Query: 370 ----------------------------------NGYDGNVCVVTAIIDSYAKSGYLHRA 402
NGY+GN+ V TAIIDSYAKSGYLH A
Sbjct: 363 GCRPNAVTLASVLPVFSHFSTLKGGKEIHAYAVRNGYNGNIYVATAIIDSYAKSGYLHGA 422
BLAST of Carg01023 vs. NCBI nr
Match:
XP_023539538.1 (pentatricopeptide repeat-containing protein At2g37310-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 334.0 bits (855), Expect = 1.8e-87
Identity = 211/407 (51.84%), Postives = 238/407 (58.48%), Query Frame = 0
Query: 1 MTNAKPTSLQISVPASALYPWVLQAIRRNDGMNYGAYGRFIQHVPASSSSASATASRSSC 60
MTNAKPTSLQISVPASALYPW LQAIRR+DGMNYGAYGRFIQ P SSSSASATASRSSC
Sbjct: 1 MTNAKPTSLQISVPASALYPWSLQAIRRDDGMNYGAYGRFIQLAPTSSSSASATASRSSC 60
Query: 61 SMFCRSREFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLFNLISMDAKPD 120
SMFCRSREFPRIE I W +C + F+ ++ K LSL L +P+
Sbjct: 61 SMFCRSREFPRIEECLREILSWNA-MVAECSQGWFYGECKELYKAMLSLVEL-----RPN 120
Query: 121 KFKFIVSFFDEGLSLSFLCLCSDTRGVISWLAKIVFDRMPARDIVFECDKCLRRMRSHCA 180
++ L++L L + G + ++ ++ F+ MP +D V ++ A
Sbjct: 121 ALTAVI-VLQACAQLNYLILGMEC-GSLDYVWEL-FEEMPEKDEV-----------TYGA 180
Query: 181 MISDYMT---------EYYDT-----CERSSHLLT--------FCNTKDG---------N 240
MISDYM Y + C ++ L F KDG N
Sbjct: 181 MISDYMVHEQPISWSCRYISSNAVHGCRPNTVTLASVLPIFSHFSTLKDGKEIHAYAVRN 240
Query: 241 GYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFF 300
YDGNVCVVTAIIDSYAKSGY HRARLVCDQFK
Sbjct: 241 CYDGNVCVVTAIIDSYAKSGYFHRARLVCDQFK--------------------------- 300
Query: 301 YEILTNGIRPDSVAFTPVCSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSLA 360
GELDEAWKIFNVLLPEYGIQPL+EHYACMVGVLS A
Sbjct: 301 ------------------------GELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSPA 336
Query: 361 EKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLD 377
EK SDAVDFISKMPIEPTTKVW ALLNGASVAGDVELGKCVFDSLL+
Sbjct: 361 EKLSDAVDFISKMPIEPTTKVWGALLNGASVAGDVELGKCVFDSLLE 336
BLAST of Carg01023 vs. NCBI nr
Match:
KAG6580575.1 (ABC transporter G family member 20, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 325.9 bits (834), Expect = 5.0e-85
Identity = 234/574 (40.77%), Postives = 267/574 (46.52%), Query Frame = 0
Query: 23 LQAIRRNDGMNYGAYGRFIQHVPASS--------------SSASATASRSSCSMFCRSRE 82
LQ IRR+DGMNYGAYGR IQH SS + S + S+
Sbjct: 720 LQLIRRSDGMNYGAYGRLIQHCTDQRFFRLGKQLHARLVLSSVAPDNFLGSKLIALYSKS 779
Query: 83 FPRIEGHRLLIKIWQ----PWRCLQCVRYTFHNMQSDMLKLFLSLFNLISMDAKPDKF-- 142
+ + + I W L + YT HNM +DMLKLF SL NL S D KPDKF
Sbjct: 780 GSLRDAYNVFDSISHKNIFSWNAL-FISYTLHNMHADMLKLFSSLVNLNSTDVKPDKFTV 839
Query: 143 ----KFIVSFFDEGLSLSFLCLCSDTRGVIS------------------WLAKIVFDRMP 202
K + S F + + RG+ S LA+I+FDR P
Sbjct: 840 TCVLKALASLFTNSILAKEVHCFVLRRGLESDIFVVNALITFYSRCDELVLARIMFDRTP 899
Query: 203 ARDIVF---------------ECDKCLRRMR----------------------------- 262
RDIV +C + + M
Sbjct: 900 ERDIVSWNAMVAGYSQGGFYEDCKELFKAMLGSGEPKPNALTAVSVLQACAQSNDLIFGM 959
Query: 263 -----------------------------------------------SHCAMISDYMT-- 322
++ +MIS YM
Sbjct: 960 EVHKFVNESGIEMDVSLFNAVIGLYAKCGSLDYARELFEGMPEKDEVTYGSMISGYMVHG 1019
Query: 323 ------EYYDTCERS--------------------------------------------- 382
+ + ER
Sbjct: 1020 FVNQAMDLFRELERPALSTWNAVISGLVQNNQQDGVVDIFRAMQLHGCRPNTVTLASVLP 1079
Query: 383 --SHLLTFCNTKD------GNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLII 402
SH T K+ N YDGN+ V TAIIDSYAKSGYLH AR V DQ K RSLII
Sbjct: 1080 IFSHFSTLKGGKEIHAYAVRNAYDGNIYVATAIIDSYAKSGYLHGARQVFDQSKRRSLII 1139
BLAST of Carg01023 vs. ExPASy Swiss-Prot
Match:
Q9ZUT5 (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E49 PE=2 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 4.0e-53
Identity = 107/194 (55.15%), Postives = 136/194 (70.10%), Query Frame = 0
Query: 209 NGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSF 268
NG D N+ V T+IID+YAK G+L A+ V D K RSLI WTAII+AYA +G ++ A S
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 269 FYEILTNGIRPDSVAFTPVCSC-AHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLS 328
F ++ G +PD V T V S AHSG+ D A IF+ +L +Y I+P +EHYACMV VLS
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLS 514
Query: 329 LAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNII 388
A K SDA++FISKMPI+P KVW ALLNGASV GD+E+ + D L + EPENTGN I
Sbjct: 515 RAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTI 574
Query: 389 MDNLYSLFGRWKKS 402
M NLY+ GRW+++
Sbjct: 575 MANLYTQAGRWEEA 588
BLAST of Carg01023 vs. ExPASy Swiss-Prot
Match:
Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 2.6e-36
Identity = 73/192 (38.02%), Postives = 115/192 (59.90%), Query Frame = 0
Query: 210 GYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFF 269
G+ N+ + +A++D Y+K G + AR + D+ + WTAII +A +G + A+S F
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 270 YEILTNGIRPDSVAFTPV-CSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSL 329
E+ G++P+ VAF V +C+H G +DEAW FN + YG+ +EHYA + +L
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 330 AEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNIIM 389
A K +A +FISKM +EPT VW LL+ SV ++EL + V + + + EN G ++M
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 552
Query: 390 DNLYSLFGRWKK 401
N+Y+ GRWK+
Sbjct: 553 CNMYASNGRWKE 564
BLAST of Carg01023 vs. ExPASy Swiss-Prot
Match:
Q9LNU6 (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H21 PE=2 SV=2)
HSP 1 Score: 154.1 bits (388), Expect = 3.4e-36
Identity = 68/186 (36.56%), Postives = 113/186 (60.75%), Query Frame = 0
Query: 214 NVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFFYEIL 273
NV V +A+ID YAK G ++ +++V + ++L+ W ++++ ++ +G A +S F ++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 274 TNGIRPDSVAFTPVCS-CAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSLAEKF 333
++PD ++FT + S C G DE WK F ++ EYGI+P +EHY+CMV +L A K
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 334 SDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNIIMDNLY 393
+A D I +MP EP + VW ALLN + +V+L + + L EPEN G +++ N+Y
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 394 SLFGRW 399
+ G W
Sbjct: 602 AAKGMW 607
BLAST of Carg01023 vs. ExPASy Swiss-Prot
Match:
P0C899 (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)
HSP 1 Score: 151.8 bits (382), Expect = 1.7e-35
Identity = 73/188 (38.83%), Postives = 111/188 (59.04%), Query Frame = 0
Query: 214 NVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFFYEIL 273
N+ + A+ID YAK G L +AR V + K R ++ WTA+ISAY +G A++ F ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 274 TNGIRPDSVAF-TPVCSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSLAEKF 333
+G+ PDS+AF T + +C+H+G L+E F ++ Y I P +EH ACMV +L A K
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 334 SDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNIIMDNLY 393
+A FI M +EP +VW ALL V D ++G D L PE +G +++ N+Y
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 394 SLFGRWKK 401
+ GRW++
Sbjct: 523 AKAGRWEE 530
BLAST of Carg01023 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 2.2e-35
Identity = 75/200 (37.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query: 203 CNTKDGNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGA 262
C+ D G + V + A+ID YAKSG + +A V + R+++ WT II+ A +G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 263 NVALSFFYEILTNGIRPDSVAFTPVCS-CAHSGELDEAWKIFNVLLPEYGIQPLIEHYAC 322
AL+ F ++ G+RP+ V F + S C+H G +D ++FN + +YGI P IEHY C
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 323 MVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPEN 382
M+ +L A K +A + I MP + +W +LL ++V D+ELG+ L+ EP N
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 383 TGNNIIMDNLYSLFGRWKKS 402
+GN +++ NLYS GRW +S
Sbjct: 453 SGNYMLLANLYSNLGRWDES 472
BLAST of Carg01023 vs. ExPASy TrEMBL
Match:
A0A6J1CWN9 (pentatricopeptide repeat-containing protein At2g37310 OS=Momordica charantia OX=3673 GN=LOC111015095 PE=4 SV=1)
HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88
Identity = 239/588 (40.65%), Postives = 281/588 (47.79%), Query Frame = 0
Query: 10 QISVPASALYPWVLQAIRRNDGMNYGAYGRFIQH----------------VPASSSSASA 69
QIS+PA A+ PW LQAIRR DGMNY AYGR IQH + S +
Sbjct: 3 QISIPAGAVIPWALQAIRRADGMNYAAYGRLIQHCADRRFLRLGKQLHARLVLLSVTPDN 62
Query: 70 TASRSSCSMFCRS---REFPRIEGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLF 129
+ + +S R+ + G+ I+ W L + YT HNM SDMLKLF SL
Sbjct: 63 FLGSKLIAFYSKSGSLRDAYNVFGNISHKNIFS-WNAL-FISYTLHNMHSDMLKLFSSLV 122
Query: 130 NLISMDAKPDKFKFIV-------SFFDEGLSLSFLC------LCSD---TRGVISW---- 189
N +MD KPDKF SF D L+ C L SD ++++
Sbjct: 123 NSNAMDVKPDKFTITCVLKALASSFTDSILAKEVHCFVLRRGLESDIFVVNALVTYYSRC 182
Query: 190 ----LAKIVFDRMPARDIVF---------------ECDKCLRRMRSHCAMISDYMT--EY 249
LA+IVF RMP RDIV EC + + M S + + +T
Sbjct: 183 EEVVLARIVFGRMPERDIVSWNAMVAGFSQGGFYEECKELFKEMLSSVELKPNALTAVSV 242
Query: 250 YDTCERSSHLL------------------TFCNT-------------------------- 309
C +S+ L+ + CN
Sbjct: 243 LQACAQSNDLIFGMEVHRFVNESQIEMDVSLCNAVIGLYAKCGSLDYARELFEEMPEKDE 302
Query: 310 ----------------------------------------------KDG----------- 369
+DG
Sbjct: 303 VTYGSMISGYMVHGSVNQAMDLFQELKKPALSTWNAVISGLVQNNQQDGVLDIFRAMQSH 362
Query: 370 ----------------------------------NGYDGNVCVVTAIIDSYAKSGYLHRA 402
NGY+GN+ V TAIIDSYAKSGYLH A
Sbjct: 363 GCRPNAVTLASVLPVFSHFSTLKGGKEIHAYAVRNGYNGNIYVATAIIDSYAKSGYLHGA 422
BLAST of Carg01023 vs. ExPASy TrEMBL
Match:
A0A6J1F110 (pentatricopeptide repeat-containing protein At2g37310 OS=Cucurbita moschata OX=3662 GN=LOC111441405 PE=4 SV=1)
HSP 1 Score: 312.4 bits (799), Expect = 2.8e-81
Identity = 156/194 (80.41%), Postives = 165/194 (85.05%), Query Frame = 0
Query: 209 NGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSF 268
N YDGN+ V TAIIDSYAKSGYL AR V DQ K RSLIIWTAIISAYAA+G AN LS
Sbjct: 371 NAYDGNIYVATAIIDSYAKSGYLQGARQVFDQLKRRSLIIWTAIISAYAAHGDANATLSL 430
Query: 269 FYEILTNGIRPDSVAFTPV-CSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLS 328
FYE+LTNGIRPD V FT V +CAHSGELDEAWKIFNVLLPE+GIQPL+EHYACMVGVLS
Sbjct: 431 FYEMLTNGIRPDPVTFTSVLVACAHSGELDEAWKIFNVLLPEFGIQPLVEHYACMVGVLS 490
Query: 329 LAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNII 388
A K SDAV+FISKMPIEPT KVW ALLNGASVAGDVELGK VFD LLD EPENTGN II
Sbjct: 491 RAGKLSDAVEFISKMPIEPTAKVWGALLNGASVAGDVELGKYVFDRLLDIEPENTGNYII 550
Query: 389 MDNLYSLFGRWKKS 402
M NLYS FGRWK++
Sbjct: 551 MANLYSQFGRWKEA 564
BLAST of Carg01023 vs. ExPASy TrEMBL
Match:
A0A6J1J0S5 (pentatricopeptide repeat-containing protein At2g37310 OS=Cucurbita maxima OX=3661 GN=LOC111482423 PE=4 SV=1)
HSP 1 Score: 306.6 bits (784), Expect = 1.5e-79
Identity = 154/194 (79.38%), Postives = 164/194 (84.54%), Query Frame = 0
Query: 209 NGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSF 268
N YDGN+ V TAIIDSYAKSGYL AR V DQ K RSLIIWTAIISAYAA+G AN LS
Sbjct: 371 NAYDGNIYVATAIIDSYAKSGYLQGARQVFDQSKRRSLIIWTAIISAYAAHGDANATLSL 430
Query: 269 FYEILTNGIRPDSVAFTPV-CSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLS 328
FYE+LTNGIRPD V FT V +CAHSGEL+EAWKIFNVLLPE+GIQPL+EHYACMVGVLS
Sbjct: 431 FYEMLTNGIRPDPVTFTSVLVACAHSGELNEAWKIFNVLLPEFGIQPLVEHYACMVGVLS 490
Query: 329 LAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNII 388
A K SDAV+FISKMPIEPT KVW ALLNGASVAGDVELGK VFD LLD EPENTGN II
Sbjct: 491 RAGKLSDAVEFISKMPIEPTAKVWGALLNGASVAGDVELGKYVFDRLLDIEPENTGNYII 550
Query: 389 MDNLYSLFGRWKKS 402
M NLYS FG WK++
Sbjct: 551 MANLYSQFGWWKEA 564
BLAST of Carg01023 vs. ExPASy TrEMBL
Match:
A0A0A0LFN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736590 PE=4 SV=1)
HSP 1 Score: 304.7 bits (779), Expect = 5.8e-79
Identity = 150/192 (78.12%), Postives = 162/192 (84.38%), Query Frame = 0
Query: 209 NGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSF 268
N YD N+ V TAIIDSYAK GYLH A+LV DQ KGRSLI WT+IISAYA +G ANVALS
Sbjct: 371 NTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSL 430
Query: 269 FYEILTNGIRPDSVAFTPV-CSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLS 328
FYE+LTNGI+PD V FT V +CAHSGELDEAWKIFNVLLPEYGIQPL+EHYACMVGVLS
Sbjct: 431 FYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLS 490
Query: 329 LAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNII 388
A K SDAV+FISKMP+EPT KVW ALLNGASVAGDVELGK VFD L + EPENTGN +I
Sbjct: 491 RAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVI 550
Query: 389 MDNLYSLFGRWK 400
M NLYS GRWK
Sbjct: 551 MANLYSQSGRWK 562
BLAST of Carg01023 vs. ExPASy TrEMBL
Match:
A0A5A7TRM4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002030 PE=4 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 222/566 (39.22%), Postives = 264/566 (46.64%), Query Frame = 0
Query: 32 MNYGAYGRFIQH----------------VPASSSSASATASRSSCSMFCRS---REFPRI 91
MNYGAYGR IQH + SS + S + +S R+ +
Sbjct: 1 MNYGAYGRLIQHCTDHLFFRVGKQLHARLVLSSVAPDNFLGSKLISFYSKSGSLRDAYNV 60
Query: 92 EGHRLLIKIWQPWRCLQCVRYTFHNMQSDMLKLFLSLFNLISMDAKPDKF------KFIV 151
G ++ K W L + YT HNM +D+LKLFLSL N S D KPD+F K +
Sbjct: 61 FG-KIPRKNIFSWNAL-FISYTLHNMHTDLLKLFLSLVNSNSTDVKPDRFTVTCVLKALA 120
Query: 152 SFFDEG-LSLSFLC------LCSD---TRGVISW--------LAKIVFDRMPARDIVF-- 211
S F L+ C L SD +I++ LA+I+FDRMP RDIV
Sbjct: 121 SLFSNSVLAKEVHCFILRRELESDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWN 180
Query: 212 -------------ECDKCLRRMRS------------------------------------ 271
+C + R M S
Sbjct: 181 AMLAGYSQGGSYEKCKELFRVMSSSLEVKPNALTAVSVLQACAQSNDLIFGMEVHRFVNE 240
Query: 272 ----------------------------------------HCAMISDYMT--------EY 331
+C+MIS YM +
Sbjct: 241 SQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDL 300
Query: 332 YDTCERS-----------------------------------------------SHLLTF 391
+ ER SH T
Sbjct: 301 FRELERPRLPTWNAVISGLVQNNRQDGALDIFRAMQSHGCRPNTVTLASILPIFSHFSTL 360
Query: 392 CNTKDGNG------YDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAY 402
K+ +G YDGN+ V TAIIDSYAK GYL AR V DQ KGRSLI WT+IISAY
Sbjct: 361 KGGKEIHGYAIRNTYDGNIFVATAIIDSYAKCGYLQGARQVFDQLKGRSLIAWTSIISAY 420
BLAST of Carg01023 vs. TAIR 10
Match:
AT2G37310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 210.3 bits (534), Expect = 2.9e-54
Identity = 107/194 (55.15%), Postives = 136/194 (70.10%), Query Frame = 0
Query: 209 NGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSF 268
NG D N+ V T+IID+YAK G+L A+ V D K RSLI WTAII+AYA +G ++ A S
Sbjct: 395 NGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSL 454
Query: 269 FYEILTNGIRPDSVAFTPVCSC-AHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLS 328
F ++ G +PD V T V S AHSG+ D A IF+ +L +Y I+P +EHYACMV VLS
Sbjct: 455 FDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLS 514
Query: 329 LAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNII 388
A K SDA++FISKMPI+P KVW ALLNGASV GD+E+ + D L + EPENTGN I
Sbjct: 515 RAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTI 574
Query: 389 MDNLYSLFGRWKKS 402
M NLY+ GRW+++
Sbjct: 575 MANLYTQAGRWEEA 588
BLAST of Carg01023 vs. TAIR 10
Match:
AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 154.5 bits (389), Expect = 1.9e-37
Identity = 73/192 (38.02%), Postives = 115/192 (59.90%), Query Frame = 0
Query: 210 GYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFF 269
G+ N+ + +A++D Y+K G + AR + D+ + WTAII +A +G + A+S F
Sbjct: 373 GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLF 432
Query: 270 YEILTNGIRPDSVAFTPV-CSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSL 329
E+ G++P+ VAF V +C+H G +DEAW FN + YG+ +EHYA + +L
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGR 492
Query: 330 AEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNIIM 389
A K +A +FISKM +EPT VW LL+ SV ++EL + V + + + EN G ++M
Sbjct: 493 AGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLM 552
Query: 390 DNLYSLFGRWKK 401
N+Y+ GRWK+
Sbjct: 553 CNMYASNGRWKE 564
BLAST of Carg01023 vs. TAIR 10
Match:
AT1G20230.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 154.1 bits (388), Expect = 2.4e-37
Identity = 68/186 (36.56%), Postives = 113/186 (60.75%), Query Frame = 0
Query: 214 NVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFFYEIL 273
NV V +A+ID YAK G ++ +++V + ++L+ W ++++ ++ +G A +S F ++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 274 TNGIRPDSVAFTPVCS-CAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSLAEKF 333
++PD ++FT + S C G DE WK F ++ EYGI+P +EHY+CMV +L A K
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 334 SDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNIIMDNLY 393
+A D I +MP EP + VW ALLN + +V+L + + L EPEN G +++ N+Y
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIY 601
Query: 394 SLFGRW 399
+ G W
Sbjct: 602 AAKGMW 607
BLAST of Carg01023 vs. TAIR 10
Match:
AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 151.8 bits (382), Expect = 1.2e-36
Identity = 73/188 (38.83%), Postives = 111/188 (59.04%), Query Frame = 0
Query: 214 NVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGANVALSFFYEIL 273
N+ + A+ID YAK G L +AR V + K R ++ WTA+ISAY +G A++ F ++
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 274 TNGIRPDSVAF-TPVCSCAHSGELDEAWKIFNVLLPEYGIQPLIEHYACMVGVLSLAEKF 333
+G+ PDS+AF T + +C+H+G L+E F ++ Y I P +EH ACMV +L A K
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 334 SDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPENTGNNIIMDNLY 393
+A FI M +EP +VW ALL V D ++G D L PE +G +++ N+Y
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 394 SLFGRWKK 401
+ GRW++
Sbjct: 523 AKAGRWEE 530
BLAST of Carg01023 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 151.4 bits (381), Expect = 1.6e-36
Identity = 75/200 (37.50%), Postives = 116/200 (58.00%), Query Frame = 0
Query: 203 CNTKDGNGYDGNVCVVTAIIDSYAKSGYLHRARLVCDQFKGRSLIIWTAIISAYAANGGA 262
C+ D G + V + A+ID YAKSG + +A V + R+++ WT II+ A +G
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHG 332
Query: 263 NVALSFFYEILTNGIRPDSVAFTPVCS-CAHSGELDEAWKIFNVLLPEYGIQPLIEHYAC 322
AL+ F ++ G+RP+ V F + S C+H G +D ++FN + +YGI P IEHY C
Sbjct: 333 AEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGC 392
Query: 323 MVGVLSLAEKFSDAVDFISKMPIEPTTKVWDALLNGASVAGDVELGKCVFDSLLDTEPEN 382
M+ +L A K +A + I MP + +W +LL ++V D+ELG+ L+ EP N
Sbjct: 393 MIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNN 452
Query: 383 TGNNIIMDNLYSLFGRWKKS 402
+GN +++ NLYS GRW +S
Sbjct: 453 SGNYMLLANLYSNLGRWDES 472
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7027978.1 | 4.8e-237 | 100.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6596437.1 | 2.4e-103 | 73.38 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022145703.1 | 2.2e-88 | 40.65 | pentatricopeptide repeat-containing protein At2g37310 [Momordica charantia] | [more] |
XP_023539538.1 | 1.8e-87 | 51.84 | pentatricopeptide repeat-containing protein At2g37310-like [Cucurbita pepo subsp... | [more] |
KAG6580575.1 | 5.0e-85 | 40.77 | ABC transporter G family member 20, partial [Cucurbita argyrosperma subsp. soror... | [more] |
Match Name | E-value | Identity | Description | |
Q9ZUT5 | 4.0e-53 | 55.15 | Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana OX... | [more] |
Q9LW63 | 2.6e-36 | 38.02 | Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... | [more] |
Q9LNU6 | 3.4e-36 | 36.56 | Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana OX... | [more] |
P0C899 | 1.7e-35 | 38.83 | Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... | [more] |
Q9FMA1 | 2.2e-35 | 37.50 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1CWN9 | 1.1e-88 | 40.65 | pentatricopeptide repeat-containing protein At2g37310 OS=Momordica charantia OX=... | [more] |
A0A6J1F110 | 2.8e-81 | 80.41 | pentatricopeptide repeat-containing protein At2g37310 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1J0S5 | 1.5e-79 | 79.38 | pentatricopeptide repeat-containing protein At2g37310 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0LFN1 | 5.8e-79 | 78.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G736590 PE=4 SV=1 | [more] |
A0A5A7TRM4 | 1.1e-77 | 39.22 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT2G37310.1 | 2.9e-54 | 55.15 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G23330.1 | 1.9e-37 | 38.02 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G20230.1 | 2.4e-37 | 36.56 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G49142.1 | 1.2e-36 | 38.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G56310.1 | 1.6e-36 | 37.50 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |