CaUC11G212140 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC11G212140
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	GATA type zinc finger transcription factor family protein
Location	Ciama_Chr11: 24979202 .. 24981150 (-)
RNA-Seq Expression	CaUC11G212140
Synteny	CaUC11G212140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATGCAGCCACTGCAAAGGGACTCTAAAGGTATTGCACTGTGTTTTTTGATCTGGATTCTCATCTCTAATATAGCTGAACGCCTCTGAACCAAAGGGTTAGGATATATTTATTCTTTTATATGTGTTTTGGAAGCTCTGGTACCATGCTAATTGACATGACAATTAAATCTAAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTAAATAACGCTTTCTTTTTGTTATACGGGGAATCTAAGCATCTTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCATCTGTTGATGTATCTATCACAAGTAAACACAACCTAGATATCAAAGGTTCTCATGTATAACAAGAGATTGACTCGAGCAATAACAAGAGATTTCCTAGAAGGATTGGAAGGTGGTTTATGTTTTTAAGAATTGGAACTCTATCTTACTGTTTATAACCTTGATATTTTCTTGCCTTCAGCTGAGCAATTATTGTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACGTACGTTCTGATTTCTTTCAGATAACTTTATGTTTCACTTCCCAAAAATTTTGCTTTCACATGTTTAATTGTTTTTGAGTTTTATTTTCTACAGCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGTAATTTCCTGTTGTAATCAATTGTAATCTGATATTAGGGAGCTTTTTCTCCAAGGAGATAAAATTATGTTGTGTATTGCAACTAATTCTTTTAACCATTAACTGGTTTCAGACTAGGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACCCACCTACTGAAATCTTGACAAATAATTCATTATCCCCCTCCTCCTTCAACAAAAGAAAGAGTGAACATTGTTGGAAGCATCCAATCTATGATGCATTAATGTATGAATGAACATCTGTTAGAGTAGGCTAATTAGTTTTGGTTCAAGTTTTGCTATAAAGCTGTGAAGATACAAAATTTAGATTAAAATATTCATCACATGTTAGTATATTACAATTGATAGTTTTATAGAGGACTATATGAATTTGTTATTACAAATACTTGCAGGTAACAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAAAGTTCTAATTCTCGTATCATTATTCATGGTTTCGGACATGACTCTCTATTTACATGAATGTGTTTTAACTTAAAAATTTATGTTTTCGAGATGGAAAAAAGGGTAAAGGAAAAATATATATGTTACCATCATTTCGGCTCGTGTGTTTATTTGGGCAAACTGTTGAATTTGATCGATATTTGAGATGCAAACCTTATTCATTGTTTCCAGGACTTGCATATTTGCATATTTTGAGCATTATGCATTGTGTTTTCGTGCATAACAAAAACATTTATGGAGAGAATGGGAACAGAAAGCTGCAGATTGAATACCCAAAAAATAAAAGATTAAGGGTAGAGGAAAGAGACATTTCTCTTCTAATTGACACCATAAGGTGGGATGAAACATATTCTGGAATGATGTTTTTGCAATGTGATGTTATTATGATTT

mRNA sequence

ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATGCAGCCACTGCAAAGGGACTCTAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTAAATAACGCTTTCTTTTTGTTATACGGGGAATCTAAGCATCTTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCATCTGTTGATGTATCTATCACAACTGAGCAATTATTGTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGTAATTTCCTGTTGTAATCAATTGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAAAGTTCTAATTCTCGTATCATTATTCATGGTTTCGGACATGACTCTCTATTTACATGAATGTGTTTTAACTTAAAAATTTATGTTTTCGAGATGGAAAAAAGGGTAAAGGAAAAATATATATGTTACCATCATTTCGGCTCGTGTGTTTATTTGGGCAAACTGTTGAATTTGATCGATATTTGAGATGCAAACCTTATTCATTGTTTCCAGGACTTGCATATTTGCATATTTTGAGCATTATGCATTGTGTTTTCGTGCATAACAAAAACATTTATGGAGAGAATGGGAACAGAAAGCTGCAGATTGAATACCCAAAAAATAAAAGATTAAGGGTAGAGGAAAGAGACATTTCTCTTCTAATTGACACCATAAGGTGGGATGAAACATATTCTGGAATGATGTTTTTGCAATGTGATGTTATTATGATTT

Coding sequence (CDS)

ATGTCTTTCATTGGCACACAACAAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCTGATGGAGTTTCCTACCATAAGTCTTGCTTTAAATGCAGCCACTGCAAAGGGACTCTAAAGCTTAAGTTGATTGGTTATAGCATATATTCTTTTACATGTATTCTAAATAACGCTTTCTTTTTGTTATACGGGGAATCTAAGCATCTTGCCAAACTATTTTCTAAAGGATATCCAAATGTGATATCAACTTCTGCCTCCAGTATCCATCTGTTGATGTATCTATCACAACTGAGCAATTATTGTTCAATGGAAGGTGTTCTTTACTGTAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACCGGCAACTTCCAGAAGAACTTCCAATCACCTGCCAAGTCAGCTGAGAAGTTAACTCCAGAGCTGGTAATTTCCTGTTGTAATCAATTGTCACCTAGCAAAGCTGCTGGCATGTTTTCTGGTACTCAAGACAAATGTGCTACTTGTGGTAAAACTGTCTATCCATTAGAGAAGGTAACAGTTGAAAGCCAATCCTACCACAAGTCCTGTTTTAAGTGCTCTCATGGAGGGTGTGCTATATCACCATCAAATTATGCAGCATTAGAAGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTTCTGCTGCCCCTGTTCCCGAAGCTTAA

Protein sequence

MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCILNNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQLFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPLEKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRSAAPVPEA

Homology

[Close]

BLAST of CaUC11G212140 vs. NCBI nr
Match: XP_004138434.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_008441431.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_011656401.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN45769.1 hypothetical protein Csa_005194 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.8e-94
Identity = 184/251 (73.31%), Postives = 185/251 (73.71%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKETGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKRSAAPVPEA
Sbjct: 241 MKRSAAPVPEA 189

[Close]

BLAST of CaUC11G212140 vs. NCBI nr
Match: XP_038884117.1 (LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM domain-containing protein WLIM2b [Benincasa hispida])

HSP 1 Score: 354.4 bits (908), Expect = 8.2e-94
Identity = 183/251 (72.91%), Postives = 184/251 (73.31%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVYPVEQLSADG+SYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGISYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKETGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKRSAAPVPEA
Sbjct: 241 MKRSAAPVPEA 189

[Close]

BLAST of CaUC11G212140 vs. NCBI nr
Match: XP_022939310.1 (LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939312.1 LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022993072.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >XP_022993073.1 LIM domain-containing protein WLIM2b [Cucurbita maxima] >KAG7015999.1 LIM domain-containing protein WLIM2b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.4 bits (890), Expect = 1.0e-91
Identity = 180/251 (71.71%), Postives = 182/251 (72.51%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKESGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKR AA VPEA
Sbjct: 241 MKRPAASVPEA 189

[Close]

BLAST of CaUC11G212140 vs. NCBI nr
Match: KAG6578438.1 (LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.3 bits (887), Expect = 2.2e-91
Identity = 179/251 (71.31%), Postives = 182/251 (72.51%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCK+CEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKSCEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKESGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKR AA VPEA
Sbjct: 241 MKRPAASVPEA 189

[Close]

BLAST of CaUC11G212140 vs. NCBI nr
Match: XP_023550254.1 (LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 346.3 bits (887), Expect = 2.2e-91
Identity = 179/251 (71.31%), Postives = 182/251 (72.51%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKC+HCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCTHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKESGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKR AA VPEA
Sbjct: 241 MKRPAASVPEA 189

[Close]

BLAST of CaUC11G212140 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.4e-82
Identity = 157/246 (63.82%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLS+Y SMEGVLYCKPHFEQ
Sbjct: 61  ----------------------------------------QLSSYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+
Sbjct: 121 LFKESGSFNKNFQSPAKSADKSTPELT------RTPSRVAGRFSGTQEKCATCSKTVYPI 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQ+YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 184

Query: 241 MKRSAA 247
           +KRSAA
Sbjct: 241 IKRSAA 184

[Close]

BLAST of CaUC11G212140 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.2e-80
Identity = 155/252 (61.51%), Postives = 169/252 (67.06%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKC+ACEKTVYPVE LSADG+SYHK+CFKCSHCK  L                
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLSNY SMEGV+YC+PHFEQ
Sbjct: 61  ----------------------------------------QLSNYSSMEGVVYCRPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKS-AEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYP 180
           LFKE+G+F KNFQSPAK   +K TPEL        +PS+ AGMFSGTQDKCATC KTVYP
Sbjct: 121 LFKESGSFSKNFQSPAKPLTDKPTPEL------NRTPSRLAGMFSGTQDKCATCTKTVYP 180

Query: 181 LEKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSA 240
           +EKVTVESQ YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSA
Sbjct: 181 IEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSA 190

Query: 241 SMKRSAAPVPEA 252
           S+KR+ A    A
Sbjct: 241 SIKRATAAATAA 190

[Close]

BLAST of CaUC11G212140 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.0e-59
Identity = 118/246 (47.97%), Postives = 148/246 (60.16%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GT  KCKAC+KTVY ++ L+ +G +YHKSCF+C+HCKGTL                
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    +SNY SM+GVLYCKPHFEQ
Sbjct: 61  ----------------------------------------VISNYSSMDGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GN+ KNFQ  A   EK    L        +PSK +  FSGTQDKCATC KTVYPL
Sbjct: 121 LFKESGNYSKNFQ--AGKTEKPNDHLT------RTPSKLSSFFSGTQDKCATCKKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVT+E +SYHK+CF+C+H GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+
Sbjct: 181 EKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAA 182

Query: 241 MKRSAA 247
             R +A
Sbjct: 241 NHRRSA 182

[Close]

BLAST of CaUC11G212140 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.6e-58
Identity = 112/246 (45.53%), Postives = 150/246 (60.98%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GT  KC  C+KTVY V+ LS +G+ YHKSCF+C+HCKGTL                
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   Q+SNY SM+GVLYCK HFEQ
Sbjct: 61  ----------------------------------------QMSNYSSMDGVLYCKTHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GNF KNFQ P K+ +   PEL        +PSK + +F GTQDKCA C KTVYPL
Sbjct: 121 LFKESGNFSKNFQ-PGKTEK---PELT------RTPSKISSIFCGTQDKCAACEKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EK+ +E + +HK+CF+C+HGGC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+
Sbjct: 181 EKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAAN 180

Query: 241 MKRSAA 247
            +R+A+
Sbjct: 241 HRRTAS 180

[Close]

BLAST of CaUC11G212140 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-58
Identity = 122/251 (48.61%), Postives = 144/251 (57.37%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQ KC AC+KTV+ ++ L+ADGV YHK+CFKCSHCKG L                
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGIL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    + +Y SM+GVLYCK HFEQ
Sbjct: 61  ----------------------------------------SMCSYSSMDGVLYCKTHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKETG+F K F    +S +K   EL        +PSK    FSGTQDKCA C KTVYPL
Sbjct: 121 LFKETGSFSKKFAPGCRSTDK---ELA------RAPSKICSAFSGTQDKCAACQKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSA 240
           EK+T+E +SYHKSCFKCSHGGC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS 
Sbjct: 181 EKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSE 186

Query: 241 SMKRSAAPVPE 251
           S +     VPE
Sbjct: 241 SQEVLPEVVPE 186

[Close]

BLAST of CaUC11G212140 vs. ExPASy TrEMBL
Match: A0A1S3B3E4 (LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 184/251 (73.31%), Postives = 185/251 (73.71%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKETGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKRSAAPVPEA
Sbjct: 241 MKRSAAPVPEA 189

[Close]

BLAST of CaUC11G212140 vs. ExPASy TrEMBL
Match: A0A0A0KAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 184/251 (73.31%), Postives = 185/251 (73.71%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKETGNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKETGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKRSAAPVPEA
Sbjct: 241 MKRSAAPVPEA 189

[Close]

BLAST of CaUC11G212140 vs. ExPASy TrEMBL
Match: A0A6J1K140 (LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.9e-92
Identity = 180/251 (71.71%), Postives = 182/251 (72.51%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKESGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKR AA VPEA
Sbjct: 241 MKRPAASVPEA 189

[Close]

BLAST of CaUC11G212140 vs. ExPASy TrEMBL
Match: A0A6J1FFI9 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111445264 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.9e-92
Identity = 180/251 (71.71%), Postives = 182/251 (72.51%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSFIGTQQKCKACEKTVYPVEQLS DGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNY SMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+GNF KNFQSPAKSAEKLTPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKESGNFNKNFQSPAKSAEKLTPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQSYHKSCFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 189

Query: 241 MKRSAAPVPEA 252
           MKR AA VPEA
Sbjct: 241 MKRPAASVPEA 189

[Close]

BLAST of CaUC11G212140 vs. ExPASy TrEMBL
Match: A0A6J1JU67 (LIM domain-containing protein WLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111487536 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.6e-90
Identity = 178/251 (70.92%), Postives = 181/251 (72.11%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK               
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLK--------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                    LSNYCSMEGVLYCKPHFEQ
Sbjct: 61  -----------------------------------------LSNYCSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKETGNF KNFQSPAKSAEK TPEL        SPSKAAGMFSGTQDKCATCGKTVYPL
Sbjct: 121 LFKETGNFNKNFQSPAKSAEK-TPELT------RSPSKAAGMFSGTQDKCATCGKTVYPL 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVE+Q YHKSCFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIK AS
Sbjct: 181 EKVTVENQCYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCAS 188

Query: 241 MKRSAAPVPEA 252
           MKR+AA VPEA
Sbjct: 241 MKRNAASVPEA 188

[Close]

BLAST of CaUC11G212140 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 157/246 (63.82%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLS+Y SMEGVLYCKPHFEQ
Sbjct: 61  ----------------------------------------QLSSYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+
Sbjct: 121 LFKESGSFNKNFQSPAKSADKSTPELT------RTPSRVAGRFSGTQEKCATCSKTVYPI 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQ+YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 184

Query: 241 MKRSAA 247
           +KRSAA
Sbjct: 241 IKRSAA 184

[Close]

BLAST of CaUC11G212140 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 157/246 (63.82%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLS+Y SMEGVLYCKPHFEQ
Sbjct: 61  ----------------------------------------QLSSYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+
Sbjct: 121 LFKESGSFNKNFQSPAKSADKSTPELT------RTPSRVAGRFSGTQEKCATCSKTVYPI 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQ+YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 184

Query: 241 MKRSAA 247
           +KRSAA
Sbjct: 241 IKRSAA 184

[Close]

BLAST of CaUC11G212140 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 157/246 (63.82%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLS+Y SMEGVLYCKPHFEQ
Sbjct: 61  ----------------------------------------QLSSYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+
Sbjct: 121 LFKESGSFNKNFQSPAKSADKSTPELT------RTPSRVAGRFSGTQEKCATCSKTVYPI 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQ+YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 184

Query: 241 MKRSAA 247
           +KRSAA
Sbjct: 241 IKRSAA 184

[Close]

BLAST of CaUC11G212140 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 157/246 (63.82%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLS+Y SMEGVLYCKPHFEQ
Sbjct: 61  ----------------------------------------QLSSYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+
Sbjct: 121 LFKESGSFNKNFQSPAKSADKSTPELT------RTPSRVAGRFSGTQEKCATCSKTVYPI 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQ+YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 184

Query: 241 MKRSAA 247
           +KRSAA
Sbjct: 241 IKRSAA 184

[Close]

BLAST of CaUC11G212140 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 305.8 bits (782), Expect = 3.1e-83
Identity = 157/246 (63.82%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLKLIGYSIYSFTCIL 60
           MSF GTQQKCKACEKTVY VE LSADGV YHKSCFKC+HCK  L                
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRL---------------- 60

Query: 61  NNAFFLLYGESKHLAKLFSKGYPNVISTSASSIHLLMYLSQLSNYCSMEGVLYCKPHFEQ 120
                                                   QLS+Y SMEGVLYCKPHFEQ
Sbjct: 61  ----------------------------------------QLSSYSSMEGVLYCKPHFEQ 120

Query: 121 LFKETGNFQKNFQSPAKSAEKLTPELVISCCNQLSPSKAAGMFSGTQDKCATCGKTVYPL 180
           LFKE+G+F KNFQSPAKSA+K TPEL        +PS+ AG FSGTQ+KCATC KTVYP+
Sbjct: 121 LFKESGSFNKNFQSPAKSADKSTPELT------RTPSRVAGRFSGTQEKCATCSKTVYPI 180

Query: 181 EKVTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSAS 240
           EKVTVESQ+YHKSCFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS
Sbjct: 181 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 184

Query: 241 MKRSAA 247
           +KRSAA
Sbjct: 241 IKRSAA 184

The following BLAST results are available for this feature:

BLAST of CaUC11G212140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138434.1	2.8e-94	73.31	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED...	[more]
XP_038884117.1	8.2e-94	72.91	LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM dom...	[more]
XP_022939310.1	1.0e-91	71.71	LIM domain-containing protein WLIM2b [Cucurbita moschata] >XP_022939311.1 LIM do...	[more]
KAG6578438.1	2.2e-91	71.31	LIM domain-containing protein WLIM2b, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023550254.1	2.2e-91	71.31	LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]	[more]

BLAST of CaUC11G212140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	4.4e-82	63.82	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	3.2e-80	61.51	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	4.0e-59	47.97	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q1ECF5	2.6e-58	45.53	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q7F9R9	3.4e-58	48.61	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of CaUC11G212140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3E4	1.4e-94	73.31	LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=...	[more]
A0A0A0KAA4	1.4e-94	73.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1	[more]
A0A6J1K140	4.9e-92	71.71	LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197...	[more]
A0A6J1FFI9	4.9e-92	71.71	LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114452...	[more]
A0A6J1JU67	1.6e-90	70.92	LIM domain-containing protein WLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CaUC11G212140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	3.1e-83	63.82	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	3.1e-83	63.82	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	3.1e-83	63.82	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	3.1e-83	63.82	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	3.1e-83	63.82	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 0.0012 score: 26.0 coord: 169..221 e-value: 9.8E-13 score: 58.3
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 170..225 e-value: 1.3E-10 score: 41.4 coord: 10..46 e-value: 3.8E-7 score: 30.2
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 168..228 score: 12.5137
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..124 score: 10.771299
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 164..234 e-value: 1.1E-19 score: 72.4
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 9..134 e-value: 1.1E-13 score: 53.3
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 101..251 coord: 1..80
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 101..251 coord: 1..80
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 170..230 e-value: 8.10721E-37 score: 122.579
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 196..235
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 162..195
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 101..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC11G212140.1	CaUC11G212140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding