CaUC11G204550 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGTAAAGAAAGAAAGGGAAAGATAAAAGAACCGAACTCGCCAAACTTCGCAGGCGGTTCCTGAAAAACCCTAATTCTCAACTTTTTTTTCTCTGATAATCCAATGGCTTCGCGCTGTCGATCTCTGGCAACCCCAACCATTTCCCTGATTAAATCCACCATAACAAAACCCTCCATTAAACCCAGACCCGCCGCTTCCTTCACCGTCTGTTCTTCACCTACAGTTTCCAGGTAGGCAAGATCGTTGAACCATTTTCTTACCCCATTAGTTAAAATTTCTCTTCTTGGTGATTTTACCTTTTTCTTGGGTTTTTTTCTCTAATATACATTTCTTAGATTGCTAACCGAGAGCTTTGATTCTTCAGGTCGGTTTCGCAGTTGGGTTCCCTTCAGTCTCTGCTTCCTCTTCATTCGGCAGTCTCTTCGGCTCGACTAACCTCGTGTCTTGGAATCGATTCATTGTCCTCGAGGTCGTTGTCTCAGGGTATGCTCTGCAGTGCAAACCCAGGAGTTTGATATCTCCATTCTTTATAATTTATTATCTGTAAGCAACTATTTTACTCTTGTATATGATTGAATTTTCTATTGTTTTCTAATCATCCTGTTAATCAAATGCTTACGTGGGAGTTATGATTCTGCCGGAATATAGTCCAATTTGAAGTTTTGAATGCCAATTTAATTTTATGCTTGTTTCGTAGTTTACGGTTTGGGCTCTTTCAGTATCACTTTGTAAGTGTTTGTTCTTGATTCTCTTCTGCATCTTATTAGAAGCCTGATGCCTGGCTGTGTTTTGGTTTAAATTTGGGTTTCAATACCGTATTTCCTGGGTTTCAAGTTAACTAACCAAATGACGAAAGCAACTAAAGTTGTAATTGAGTCGACATATTACTGATGAAAATAGATACACCCTGGCCAAGTTTGGAAATAATTGTCACGTTCTAAGAATGCTACCTTTTATTTTGCTGTGCTAGGACTCGATCATTATAGGATTCCAGTAATTTTCACTGGATGCGTTGTTCATAGAATTCTTGGTTATGCTATGTACATTGTATAA GGGTAAAGAAAGAAAGGGAAAGATAAAAGAACCGAACTCGCCAAACTTCGCAGGCGGTTCCTGAAAAACCCTAATTCTCAACTTTTTTTTCTCTGATAATCCAATGGCTTCGCGCTGTCGATCTCTGGCAACCCCAACCATTTCCCTGATTAAATCCACCATAACAAAACCCTCCATTAAACCCAGACCCGCCGCTTCCTTCACCGTCTGTTCTTCACCTACAGTTTCCAGGTCGGTTTCGCAGTTGGGTTCCCTTCAGTCTCTGCTTCCTCTTCATTCGGCAGTCTCTTCGGCTCGACTAACCTCGTGTCTTGGAATCGATTCATTGTCCTCGAGGTCGTTGTCTCAGGTTTACGGTTTGGGCTCTTTCAGTATCACTTTGATTCCAGTAATTTTCACTGGATGCGTTGTTCATAGAATTCTTGGTTATGCTATGTACATTGTATAA ATGGCTTCGCGCTGTCGATCTCTGGCAACCCCAACCATTTCCCTGATTAAATCCACCATAACAAAACCCTCCATTAAACCCAGACCCGCCGCTTCCTTCACCGTCTGTTCTTCACCTACAGTTTCCAGGTCGGTTTCGCAGTTGGGTTCCCTTCAGTCTCTGCTTCCTCTTCATTCGGCAGTCTCTTCGGCTCGACTAACCTCGTGTCTTGGAATCGATTCATTGTCCTCGAGGTCGTTGTCTCAGGTTTACGGTTTGGGCTCTTTCAGTATCACTTTGATTCCAGTAATTTTCACTGGATGCGTTGTTCATAGAATTCTTGGTTATGCTATGTACATTGTATAA MASRCRSLATPTISLIKSTITKPSIKPRPAASFTVCSSPTVSRSVSQLGSLQSLLPLHSAVSSARLTSCLGIDSLSSRSLSQVYGLGSFSITLIPVIFTGCVVHRILGYAMYIV Homology
BLAST of CaUC11G204550 vs. NCBI nr
Match: XP_038897119.1 (protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X2 [Benincasa hispida]) HSP 1 Score: 141.7 bits (356), Expect = 3.8e-30 Identity = 79/86 (91.86%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of CaUC11G204550 vs. NCBI nr
Match: XP_008466067.1 (PREDICTED: uncharacterized protein LOC103503603 isoform X2 [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 6.5e-30 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of CaUC11G204550 vs. NCBI nr
Match: XP_038897118.1 (protein NONRESPONDING TO OXYLIPINS 2, mitochondrial isoform X1 [Benincasa hispida]) HSP 1 Score: 139.4 bits (350), Expect = 1.9e-29 Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CaUC11G204550 vs. NCBI nr
Match: KAA0038620.1 (uncharacterized protein E6C27_scaffold92G001500 [Cucumis melo var. makuwa] >TYK31219.1 uncharacterized protein E5676_scaffold455G005050 [Cucumis melo var. makuwa]) HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29 Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of CaUC11G204550 vs. NCBI nr
Match: XP_008466066.1 (PREDICTED: uncharacterized protein LOC103503603 isoform X1 [Cucumis melo]) HSP 1 Score: 138.7 bits (348), Expect = 3.2e-29 Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of CaUC11G204550 vs. ExPASy Swiss-Prot
Match: Q6NNL9 (Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 9.1e-19 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of CaUC11G204550 vs. ExPASy TrEMBL
Match: A0A1S3CQD0 (uncharacterized protein LOC103503603 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503603 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.1e-30 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 0
BLAST of CaUC11G204550 vs. ExPASy TrEMBL
Match: A0A5D3E5V6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005050 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of CaUC11G204550 vs. ExPASy TrEMBL
Match: A0A1S3CQD8 (uncharacterized protein LOC103503603 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503603 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0
BLAST of CaUC11G204550 vs. ExPASy TrEMBL
Match: A0A0A0LE59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895660 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.0e-28 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of CaUC11G204550 vs. ExPASy TrEMBL
Match: A0A6J1IVH2 (uncharacterized protein LOC111480335 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480335 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.7e-26 Identity = 72/86 (83.72%), Postives = 78/86 (90.70%), Query Frame = 0
BLAST of CaUC11G204550 vs. TAIR 10
Match: AT5G11630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 82 Blast hits to 82 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20 Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of CaUC11G204550 vs. TAIR 10
Match: AT5G11630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 6.5e-20 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of CaUC11G204550 vs. TAIR 10
Match: AT4G17310.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 2.7e-10 Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of CaUC11G204550 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09 Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of CaUC11G204550 vs. TAIR 10
Match: AT5G47455.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.2); Has 138 Blast hits to 138 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 138; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 2.6e-08 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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