CaUC11G201230 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGGTAATTGACAACACTATTTCAGCCCTTTCCCCCACTTCTATTTATTTTTTTCATCTCAAACAAAACTTGGCCGCACTTACAAATTTTGAATGGTAGAAAGTACATAGAAAGAAACTTATTTAATTTGTGTATGACATAATTACTTATATTTTTGTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCTGTGACTTGGTGGCCACAGAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGGTGCCAAACATGGAGCTTGCCATGGTCCATTTTTTAGAAGGGCTTGTTATTGCTACTTCAACTGTTGAAAACCATGCAATAACCATATGATGATCATAATCTCCTTCTCCATATATATATATATCATTCCCCTTTTTAAAATAAAAGTTTCTTAGTTACTTATTGTGTGTTTTCTTATGTGGGTGTGAAGGGATCTATATGTAATATTAGCTTTTATAAATTAATGTTTTTAAGTGTGAGAAGTTTATGTGGTTGGGAAAAGTTTGTATCATTTTATCTTTGGCAGCTTGATTGTGTGTTTCTTCTTTCTTCATATCTAAATATTGAATAAAAATGACTTTGATTACTCTTTCCCCTCTATTGAGTTATTTTGTTTCCAAATTAGATGTTTAAATCACAAATGTATAAGCATAAAAAAAAGGTTCTAATCCTCGATTCCACTTAAAAAAAACTTAGCATAAGTTAATTATTAAAAAATGTAAACATTTAAAGGAAATAAAGATTAGATATATATATAAATAAGAATTAAGAAATATCAAAGTTTATCGGGATCGAGTCACACAATTTTTTTTAGTACAAAATAATGGATATATATATGATGGATGGGCTGTTAAAGACTTTCTTTTAAGTTTCTACGCATAAATTCTTTATTGATCTTATTCTTTTTATTGTTTTTAACATGTTAGTTAGAAAACATTTGAATTGAAATAGAAAACACTACAAATTGGATCAAATGATGTTGGTATATTTCTTGGCCAATTATATTAGGTAACACAATTACACTAGTTAACAGTCAAGAGTGTGTTGAAGTTAATATATTATGTTAAGTCATCAATGTTTATTTTGTGGTAACTGAGTGCAAATTCTTGTACTAATTTGAATCATAAAGTATATAAGATGATAAATGATATGGGAGACCTTGATGTTGTAAGATGATATGTATATTTTCATGAAGTGACATGTGTTTGTTGTAAACACTTGAATTTATATATGTGTTAGGTTTGAATTATAAAATGTGAATTTGTATTTGTAGTTGGAACTTAAATCATATGCTTCTCAAGTGATCGATGGTACACTTGACATGAACGAGAATGAGATTTTTGTACGAGTATTTGGATCGGAGAAACATAGACATATTCGTGGTTATAGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGTCTAATATAAGCGATCTTGAACGTCGCCTTAATGAGTCCGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTTGAGGTAGAAGCACTCAAGCATCAAATGAGTGAATTAGAAAATCGTTTTGAGGATAGATTTCAAAAAATGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA ATGGGGAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGTGATCGATGGTACACTTGACATGAACGAGAATGAGATTTTTGTACGAGTATTTGGATCGGAGAAACATAGACATATTCGTGGTTATAGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGTCTAATATAAGCGATCTTGAACGTCGCCTTAATGAGTCCGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTTGAGGTAGAAGCACTCAAGCATCAAATGAGTGAATTAGAAAATCGTTTTGAGGATAGATTTCAAAAAATGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA ATGGGGAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTGGCTTTGCTCTTCCTTTTGGTCCTCATGCTTTCCATGAATGAGAAGCAAGGGGTGGTGGAGGCGAAGGTGTGCGAGAAGCGAAGCAAGACGTGGTCGGGATGGTGCGGGAACACGAGCAATTGCGACCGACAATGCAAGAATTGGGAAGTGATCGATGGTACACTTGACATGAACGAGAATGAGATTTTTGTACGAGTATTTGGATCGGAGAAACATAGACATATTCGTGGTTATAGAGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCGTCTAATATAAGCGATCTTGAACGTCGCCTTAATGAGTCCGAACAACGTCTTCAAGAATCTGAACAACAAAGAAAAGTTGAGGTAGAAGCACTCAAGCATCAAATGAGTGAATTAGAAAATCGTTTTGAGGATAGATTTCAAAAAATGATGGCAGAAATGCGTAAAGAATTTGTTTCTAGTTGA MGKVVGNSAKMVVALLFLLVLMLSMNEKQGVVEAKVCEKRSKTWSGWCGNTSNCDRQCKNWEVIDGTLDMNENEIFVRVFGSEKHRHIRGYRVGVTPSELFGSSSNISDLERRLNESEQRLQESEQQRKVEVEALKHQMSELENRFEDRFQKMMAEMRKEFVSS Homology
BLAST of CaUC11G201230 vs. NCBI nr
Match: XP_038904040.1 (uncharacterized protein LOC120090445 [Benincasa hispida]) HSP 1 Score: 152.1 bits (383), Expect = 4.1e-33 Identity = 85/110 (77.27%), Postives = 91/110 (82.73%), Query Frame = 0
BLAST of CaUC11G201230 vs. NCBI nr
Match: XP_004150110.1 (defensin-like protein 1 [Cucumis sativus] >KGN59894.1 hypothetical protein Csa_001866 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-23 Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CaUC11G201230 vs. NCBI nr
Match: XP_038900009.1 (defensin-like protein 1 [Benincasa hispida]) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-22 Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CaUC11G201230 vs. NCBI nr
Match: XP_008454663.1 (PREDICTED: defensin-like protein 1 [Cucumis melo] >KAA0036859.1 defensin-like protein 1 [Cucumis melo var. makuwa] >TYJ95923.1 defensin-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-21 Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CaUC11G201230 vs. NCBI nr
Match: XP_022976615.1 (defensin-like protein 1 [Cucurbita maxima]) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-20 Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy Swiss-Prot
Match: P82787 (Defensin-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=PDF1.4 PE=3 SV=2) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy Swiss-Prot
Match: P0C8Y4 (Defensin-like protein 1 OS=Dahlia merckii OX=43367 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 3.4e-06 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy Swiss-Prot
Match: O24332 (Defensin-like protein 3 OS=Raphanus sativus OX=3726 GN=AFP3 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.2e-05 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy Swiss-Prot
Match: Q7M1F2 (Defensin-like protein 1 OS=Clitoria ternatea OX=43366 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy Swiss-Prot
Match: Q39313 (Defensin-like protein 3 OS=Brassica napus OX=3708 GN=AFP3 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.8e-04 Identity = 21/47 (44.68%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy TrEMBL
Match: A0A0A0LFX9 (Knot1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G851940 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.1e-23 Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy TrEMBL
Match: A0A5A7T656 (Defensin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002350 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 5.9e-22 Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy TrEMBL
Match: A0A1S3BZX7 (defensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495015 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 5.9e-22 Identity = 53/62 (85.48%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy TrEMBL
Match: A0A6J1IJY9 (defensin-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111476957 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-20 Identity = 51/62 (82.26%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of CaUC11G201230 vs. ExPASy TrEMBL
Match: A0A6J1FBE9 (defensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111442585 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 8.0e-19 Identity = 48/62 (77.42%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of CaUC11G201230 vs. TAIR 10
Match: AT1G19610.1 (Arabidopsis defensin-like protein ) HSP 1 Score: 58.2 bits (139), Expect = 7.4e-09 Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of CaUC11G201230 vs. TAIR 10
Match: AT5G44420.1 (plant defensin 1.2 ) HSP 1 Score: 45.1 bits (105), Expect = 6.5e-05 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = 0
BLAST of CaUC11G201230 vs. TAIR 10
Match: AT5G44430.1 (plant defensin 1.2C ) HSP 1 Score: 44.7 bits (104), Expect = 8.5e-05 Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of CaUC11G201230 vs. TAIR 10
Match: AT1G75830.1 (low-molecular-weight cysteine-rich 67 ) HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CaUC11G201230 vs. TAIR 10
Match: AT2G26010.1 (plant defensin 1.3 ) HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04 Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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