CaUC10G188790 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G188790
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr10: 21665514 .. 21668946 (-)
RNA-Seq ExpressionCaUC10G188790
SyntenyCaUC10G188790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAATTTTGAGAAATAGAAGACGAGAAAAAGAAAAGTCGTCATCATCGTCCTCCTCCTCGATTCGTTCGCCGTTGTCCTCCTCCTCGATTCATGTCGTCCTCCTCTATTCATCATCGTCATCCTCTTCTCCATTTGCCATCGTCATCCTCCCCTCCATTTGTCTTCGTCCTCCTCGTCTATTCGTCGTTGTCATCATCCTCGATTCGTTGTCCGCAGCCATCACAGTATGTTTCTCTGTCCTATTTTGAGTGTCCATTGCTTTTTCTGGGTTTTTGAATTTGGAACAATTTGTTGTTATGTATAATGGTGTAAAGATGGAGTTTATATGAAGTAAAGAGCTCTATTGTCATATTTTGTTCTTGCATGTTTACCATTGCTTCATATTTTGTCTTTGTAGTTGTGGTTGAAAGCTAAGTTTTCCCTAGAATGAAGAAAAAATTTAACTTTTCTTGTGAAGATTTTGGTTTTTGGTTTATGTTGTGTGTGGGGTTATAAAACAGCCAAAAGCTTGGAAACGAGGAATTTGATTTTGGGATGATTTTTCTTGGTATAATTGTACTTCAACACCAAAATAAATCCCAAGTTTTTGAGAACACCAAAAGGAATCCCAAGTTATTTAGAACAGCAAAAGCTTTTGTTATTATTTATGATTAGTCATTAACATAGTTTTGTTTCTTTTGTTTGGAGATTATGTTCGTAGGTTGATTTTTTTCTTGATTAAGCTTCTTGAAGTATGTAGATTTTTGCAGGGGTTCTTTAAATTTTCATGCTTTTTAATTTTTAATTGAAACTTTATTATTGAGACATTTAAATGGTGATTTGGATGCTATTCATGTGATTCAAACTCATTTGGAGATGTTTGACTAGCATGATGAAAATTTGATGTCATTTAATGTTTTTTCATAGGATATTTGAGGTTAATATGTGTGTTTAAAATGTAATTTGGAGAATGGTTGCGTAGTAAAATTTTCGTTGAGATGAAGTGTGGATTGGAAGTAAATGTGTGATTGTTTGTAATTTGATTAGTGTGATTTGGAAGTGAACATTCTAAGCTTGATTTTATTTTTGGTTAAGCTACTTAAAAGTTTGTAGATTGTTCCATTGTGTTGAAAGTATTTGATTATTATTATTATGAGATGCTGAAAGTTATATATATTTTTCACATAATTTTTATTACTTCAGAGGATAAATTATGGATAAAAGTTGGATAAAATTTTGAAATAGATTATGCAAAGAATATACTGATGAAATACGATATCATTTATTAGTTTGGCAGAGAAGCATGTTGATAAGAGAGAAATTGCATGTTGTCCATGTAAAAAGTGTCAATGTCATAATGAAACAACCTCGTGATGTCGAATGTGACTTATACACATATGGAATGGTTGTCACCTACAATAGGTGGATATATCATGGCAAAACCCAAAATTGTCCTTTTTGAAACCTATAGAAATGGATAAAAGACTTAAGGAACATGTAAACGCTTCTCGTCAAAATTTAGATAATTCAAATGAAGTGCTTGAATTGTTGAATGATTTGATAAGTGGGGGAAACATTGAAGTTGAACATTATGGTGACAAAAACTACATCGAAGTTAAAACAAGTGAGAACCTTGATGTATTAAGATTTCTACTTTACTTTTTCTGGTGAAATTAATGCATGTTGGTACTTAATCATCGGAGCAATAAGTCATTTAATATGTTATTAAAATTACTAAAAAAAGCCTTACCTAAGGGTACCAAAATGCCAAAATCTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTTTTTTGTGAAAAAAGTGGGTTGGGGAGGAAGAATAATTGCGAAATATATGTCATTTTACACTTGCTATTTTTTTTTTCTTAAATGTGGAAGAAAAGTGTCTATATTTGTTATTACGTGGTACCCAAAGATCGACCACTCGATATTCTTTTTGCTGTGAAAAAAGTGGTTGGAGGAGAGAGGAGAGAACTAATATTTATGTTTGTTATTGTGAATGTGGAGAGTAGGGGAGAAGAGAAGAATGATTACAAAATATGTGTGATTTTATGCCTTTGCAAAATGTTTATGTTTTGTTATTATGTTGTAGCGGACTATTGAGTACTTCATATTTGTGTTATTGTTGTGAAAAGGGTGGTTTGGGAGGGGAAGGGGGGGAGTGAATGAGAATTTATGTTTGTTGTGACTTGATGAATTTTGTTATAATTATGTTTGAAATGATTTGAAATTATGTGAATTGAGTTTTATGATAAATATGTTTTAGACTCTGTGTTAACAAAACAGGAAAATAACTTGTGTGTTAACAAGACCTAAATTTGTAGTAGTCATAATTTAAAATAATGGTTGTTGGAGTTGGTAGAGTGAACGGTCCTTGGAAGTCATTAGAGTTGGGCATTGGAGGTGGTCCACAGAGTTCGGACGTCGGAGGTTGTCGCACGGAGTTAGACGTCGGAGGTGGTTGCGGGAGTTGGGTGTCGAAGGTGGCTAATGGAGTTGGGCGTTGGAGGTTGTTGCCAGAGTTGGTCGTCGGAGGTAGGGTCGAGAAT

mRNA sequence

CCAATTTTGAGAAATAGAAGACGAGAAAAAGAAAAGTCGTCATCATCGTCCTCCTCCTCGATTCGTTCGCCGTTGTCCTCCTCCTCGATTCATGTCGTCCTCCTCTATTCATCATCGTCATCCTCTTCTCCATTTGCCATCGTCATCCTCCCCTCCATTTGTCTTCGTCCTCCTCGTCTATTCGTCGTTGTCATCATCCTCGATTCGTTGTCCGCAGCCATCACAAGAAGCATGTTGATAAGAGAGAAATTGCATGTTGTCCATGTAAAAAGTGTCAATGTCATAATGAAACAACCTCGTGATGTCGAATGTGACTTATACACATATGGAATGGTTGTCACCTACAATAGAGTGAACGGTCCTTGGAAGTCATTAGAGTTGGGCATTGGAGGTGGTCCACAGAGTTCGGACGTCGGAGGTTGTCGCACGGAGTTAGACGTCGGAGGTGGTTGCGGGAGTTGGGTGTCGAAGGTGGCTAATGGAGTTGGGCGTTGGAGGTTGTTGCCAGAGTTGGTCGTCGGAGGTAGGGTCGAGAAT

Coding sequence (CDS)

CCAATTTTGAGAAATAGAAGACGAGAAAAAGAAAAGTCGTCATCATCGTCCTCCTCCTCGATTCGTTCGCCGTTGTCCTCCTCCTCGATTCATGTCGTCCTCCTCTATTCATCATCGTCATCCTCTTCTCCATTTGCCATCGTCATCCTCCCCTCCATTTGTCTTCGTCCTCCTCGTCTATTCGTCGTTGTCATCATCCTCGATTCGTTGTCCGCAGCCATCACAAGAAGCATGTTGATAAGAGAGAAATTGCATGTTGTCCATGTAAAAAGTGTCAATGTCATAATGAAACAACCTCGTGATGTCGAATGTGACTTATACACATATGGAATGGTTGTCACCTACAATAGAGTGAACGGTCCTTGGAAGTCATTAGAGTTGGGCATTGGAGGTGGTCCACAGAGTTCGGACGTCGGAGGTTGTCGCACGGAGTTAGACGTCGGAGGTGGTTGCGGGAGTTGGGTGTCGAAGGTGGCTAATGGAGTTGGGCGTTGGAGGTTGTTGCCAGAGTTGGTCGTCGGAGGTAGGGTCGAGAAT

Protein sequence

PILRNRRREKEKSSSSSSSSIRSPLSSSSIHVVLLYSSSSSSSPFAIVILPSICLRPPRLFVVVIILDSLSAAITRSMLIREKLHVVHVKSVNVIMKQPRDVECDLYTYGMVVTYNRVNGPWKSLELGIGGGPQSSDVGGCRTELDVGGGCGSWVSKVANGVGRWRLLPELVVGGRVEN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G188790.1CaUC10G188790.1mRNA