CaUC10G183270 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC10G183270
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTransmembrane protein, putative
LocationCiama_Chr10: 5107502 .. 5111148 (-)
RNA-Seq ExpressionCaUC10G183270
SyntenyCaUC10G183270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGATGAAGTTGATGGTTGGAGTTGGTTGCCTAAGATGATCATCAGAGTTGAGGCACCAGATGTGGTTGTCGCTAGAGTTGATCATTGGGGGTGGTTTTCATCGAAGTTAGTTGCACTTAGGTGAATGTTAGTATTGGTCGTCATTGGTGGATGTCATTGAAGTTGATCATCGAATGTATTCTTAGACAGAGTTTTCATCAAAAGTGATTATCGGAGTCTAGAGTTGGTTGTTGGAGTATGTTTTGGAGTATGGCAACAGTAGTTGCCTGAAGTGGTCAACGAGTGAAGCCAATGAAAATATTTGAGGAAGAGAAGAGTTGGGTTGGGTTAAGAAAAATATCTAACTTGACTCCATCAACATTTAAAGTTAGTGGACCAAACATTAAGATGAAAATTTTTACCAAGTCAACCCAAATCATGTTGGTGAGGTTGTTGTCAAACTCATAGACATAAAAGATACATGCTTATGCATAGCTTAATTGAATAAATATAAGCATATTAAGGGGAGTAAATTTGGAGGTTAGAGTTAAGGTAAAGAATTTCACAGCAATCCCACAAGTTAATTTCCCTCAATCCTTCAAAACCTCTCCAATAATGTCTTCTTCTGTGATCCCTTCACAATGGTTCAGTTTCAACAGCTCCAAATTTGGAAAGATGGGAGCAATTTCCCCACTCCCTCATTGCATAAATCCAGAGCAAGTTCTTGATTTCTTTCTTTTTTTCTCATTTTTGCTTTTCCCTTTCTCAGACTGTGGAACGTTCTCCACCAAAATTCTATACATGAAAACCAACGCCAAACTTCTTCGTTAATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTCAGTTTTCTGGAAATTTAGCAATGGAAGAAGAGAGAATAAGAGAGAAGAAAATGAGAGAGAGAAAGAAGAGAATGAGATAGATATTAAAAAATATTTTTTTCCTAACTCATGTTGTCACTCGACCGTCTAGTCAAATTTACTTATTTTTTTTTTTATAGATGGACATTTTAAACCTATTCTAAAACATGAATAACTAAGCACACATATTACTCAAAAGGACCAAAAATGTATTTTTTTTTTTCTATAAGCAATAACTTAGGGTGTGTTTAGAATACATTTTCGAAATGTTTAATTTAAAAAATAAGTTATTTTGAAATAAATACAATGTTTAACAACTACTCAAAATGAATTTCGAAAGTCATTAGTGTTTTTATTTTAACAGTTATTATCAACCGTGTTCAAATAAAAATGAATTTTTTAAAAACATTTATTTTTTAAGTTAATTCAAACAGGTCCTCAATCTTTACCGTTTATAAATAAATGTGAGTCTTGATCAATTTAACGATCCACATGTATAAAAAAATTTTCATTAAAAATCTTAATAATATTGTTCACAATAAAGAATAAATGGTTACAAATTGTAAGATATGTGGATTAAATAATTATTTATTAAAGTTTAATGACTAAATTATTATAATATTAAAAATATTAAAACTAAATCATTACCAACTAAAATTTATGAACTAAATTAATATTTTGGGAATTTACAAATATAAGAAAATGAACCAAATATTTATAAATAAAACAAAATTAATAATTACTCCCTAAATCGAAATCAAACGATTCAATTTATCTCATCACACTGTTTTAAGGTTTAGTTTGATATGAAAATTAACTAGCTAAAACTCTTTAACCCCCATACTAGTGAGTTGCTAACAAGCGAGCTGCTAACAGAGGTAGGCTGACTGGCTAGTGACTCCCACTTGTAGTGCTCTATCACCAACCGAATAAAGTCAGGAAGAATGCCACTTCCTCCCCCAGAAGCCATTCTCCTAAAAAAATTTCCTCTTCGTAAGGGCTTCCTTCTTTTTCGTCATCTCCTATTCATTCTCAGTTTCATTACAAGAAAAGTAATATACATTTTCTAGCAAAAATGAATCTAACTCCAAAAGATAACTTCATATCTTCCACTACTTCAGCCAAGACAAACTCTCTTGATCCAACTCGAAAAGTAGTTTGGCCATTTTTAAGCTGCTTCCAAGAACTAATTTCTTAAAATAAAGAGTAAATATAATTAATGACCCCTGAAATGATAGACATAGAGAGATTGAAACAATTTTATAATTTAAAATAATTTCTCAATTTAAAGGTATGAGATTTTATTTTGATTCCAAACCATATCTAGTAAACAACGCAAATAAAATAATATTTAAAATTTGCAGTAAACGGGCCTTAATGGAAGAAAAGGATTGGTTAAAGAGTCTTTGAAAAGCCCAAAAGTGTTGCGTGTGAGAATTTACCAAACCCGAAATAACCCCCAAACCTAATCCAACTGCCACGTCTTCTTCAGCCGTTCTCCAAAAGCAAAACTCCTTTTTTTTAAATTTAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAGAAAATTACAAACCTCACTTTCCCAACCAAATCCAAACGCCTTACAAAACTATTGCCTTCTTTTCAAGCGACTGCTCTCCCATTTATAAAGATTCCGTTCTTCCTTCTTCCTCTCGATCGCCAATTCACCGCAACGGAATCCAAGATCCGGCCGCCGTAGCCACGATGTGCTGCTTTGGAAAGGTCTGCATGCTCTGCACCTGCCTGATTCTGGTGGTTGTGACCATCGGATTTCTCTTCGGATTCGGAGTTTTCAAAGACGGATTTCATAAGATTAAAGGTAAGGTCGATTTCTGCGATGGAGGTCTCTGCGGCGGCGGTGGAAGGCCTTTCTTCGCGGCTCCTCCTCCTCGGTTTTAG

mRNA sequence

ATGAACGATGAAGTTGATGGTTGGAGTTGGTTGCCTAAGATGATCATCAGAGTTGAGGCACCAGATGTGGTTGTCGCTAGAGTTGATCATTGGGGGTGGTTTTCATCGAAGTTAGTTGCACTTAGCGACTGCTCTCCCATTTATAAAGATTCCGTTCTTCCTTCTTCCTCTCGATCGCCAATTCACCGCAACGGAATCCAAGATCCGGCCGCCGTAGCCACGATGTGCTGCTTTGGAAAGGTCTGCATGCTCTGCACCTGCCTGATTCTGGTGGTTGTGACCATCGGATTTCTCTTCGGATTCGGAGTTTTCAAAGACGGATTTCATAAGATTAAAGGTAAGGTCGATTTCTGCGATGGAGGTCTCTGCGGCGGCGGTGGAAGGCCTTTCTTCGCGGCTCCTCCTCCTCGGTTTTAG

Coding sequence (CDS)

ATGAACGATGAAGTTGATGGTTGGAGTTGGTTGCCTAAGATGATCATCAGAGTTGAGGCACCAGATGTGGTTGTCGCTAGAGTTGATCATTGGGGGTGGTTTTCATCGAAGTTAGTTGCACTTAGCGACTGCTCTCCCATTTATAAAGATTCCGTTCTTCCTTCTTCCTCTCGATCGCCAATTCACCGCAACGGAATCCAAGATCCGGCCGCCGTAGCCACGATGTGCTGCTTTGGAAAGGTCTGCATGCTCTGCACCTGCCTGATTCTGGTGGTTGTGACCATCGGATTTCTCTTCGGATTCGGAGTTTTCAAAGACGGATTTCATAAGATTAAAGGTAAGGTCGATTTCTGCGATGGAGGTCTCTGCGGCGGCGGTGGAAGGCCTTTCTTCGCGGCTCCTCCTCCTCGGTTTTAG

Protein sequence

MNDEVDGWSWLPKMIIRVEAPDVVVARVDHWGWFSSKLVALSDCSPIYKDSVLPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLCGGGGRPFFAAPPPRF
Homology
[Close]
BLAST of CaUC10G183270 vs. NCBI nr
Match: XP_022932418.1 (uncharacterized protein LOC111438773 [Cucurbita moschata] >XP_022932419.1 uncharacterized protein LOC111438773 [Cucurbita moschata] >XP_022932420.1 uncharacterized protein LOC111438773 [Cucurbita moschata] >XP_022932421.1 uncharacterized protein LOC111438773 [Cucurbita moschata])

HSP 1 Score: 128.3 bits (321), Expect = 5.3e-26
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLC---GGGGRPFF 134
           MCCFGKVCMLCTCLILVVV +GFLFGFGVFKDGFHKIK K DFCDGG+C   GGGGRPFF
Sbjct: 1   MCCFGKVCMLCTCLILVVVAVGFLFGFGVFKDGFHKIKDKADFCDGGICGSGGGGGRPFF 60

Query: 135 AAPPPRF 139
           AAPPPRF
Sbjct: 61  AAPPPRF 67

[Close]
BLAST of CaUC10G183270 vs. NCBI nr
Match: KAG7015596.1 (hypothetical protein SDJN02_23232, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.5 bits (319), Expect = 9.0e-26
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLC-----GGGGRP 134
           MCCFGKVCMLCTCLILVVV +GFLFGFGVFKDGFHKIK K DFCDGG+C     GGGGRP
Sbjct: 1   MCCFGKVCMLCTCLILVVVAVGFLFGFGVFKDGFHKIKDKADFCDGGICGSGGGGGGGRP 60

Query: 135 FFAAPPPRF 139
           FFAAPPPRF
Sbjct: 61  FFAAPPPRF 69

[Close]
BLAST of CaUC10G183270 vs. NCBI nr
Match: XP_038905566.1 (uncharacterized protein Os04g0629400 [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-25
Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLC------GGGGR 134
           MCCFGKVCMLCTCLILVVV IG LFGFGVFKDGFHKIK KVD+CDGGLC      GGGGR
Sbjct: 1   MCCFGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDYCDGGLCGGGGGGGGGGR 60

Query: 135 PFFAAPPPRF 139
           PFFAAPPPRF
Sbjct: 61  PFFAAPPPRF 70

[Close]
BLAST of CaUC10G183270 vs. NCBI nr
Match: XP_008449006.1 (PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 7.6e-25
Identity = 58/64 (90.62%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLCGGGGRPFFAAP 134
           MCCFGK+CMLCTCLILVVV IG LFGFGVFKDGFHKIK KVDFCDGGLC GGGRPFF AP
Sbjct: 1   MCCFGKLCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGGLC-GGGRPFFPAP 60

Query: 135 PPRF 139
           PPRF
Sbjct: 61  PPRF 63

[Close]
BLAST of CaUC10G183270 vs. NCBI nr
Match: KAG7028302.1 (hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-24
Identity = 63/86 (73.26%), Postives = 67/86 (77.91%), Query Frame = 0 

Query: 53  LPSSSRSPIHRNGIQDPAAVATMCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIK 112
           LP      IH N  QDPA+ ATMCCFGKVCM C+CL+LV V IG LFGFG+FKDGFHKIK
Sbjct: 82  LPRHFLPQIHTNE-QDPAS-ATMCCFGKVCMFCSCLVLVAVAIGLLFGFGIFKDGFHKIK 141

Query: 113 GKVDFCDGGLCGGGGRPFFAAPPPRF 139
            KVDFCDG LC G GRPFFAAPP RF
Sbjct: 142 DKVDFCDGDLC-GRGRPFFAAPPRRF 164

[Close]
BLAST of CaUC10G183270 vs. ExPASy TrEMBL
Match: A0A6J1EWB7 (uncharacterized protein LOC111438773 OS=Cucurbita moschata OX=3662 GN=LOC111438773 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.6e-26
Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLC---GGGGRPFF 134
           MCCFGKVCMLCTCLILVVV +GFLFGFGVFKDGFHKIK K DFCDGG+C   GGGGRPFF
Sbjct: 1   MCCFGKVCMLCTCLILVVVAVGFLFGFGVFKDGFHKIKDKADFCDGGICGSGGGGGRPFF 60

Query: 135 AAPPPRF 139
           AAPPPRF
Sbjct: 61  AAPPPRF 67

[Close]
BLAST of CaUC10G183270 vs. ExPASy TrEMBL
Match: A0A1S3BL26 (uncharacterized protein LOC103491008 OS=Cucumis melo OX=3656 GN=LOC103491008 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 3.7e-25
Identity = 58/64 (90.62%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLCGGGGRPFFAAP 134
           MCCFGK+CMLCTCLILVVV IG LFGFGVFKDGFHKIK KVDFCDGGLC GGGRPFF AP
Sbjct: 1   MCCFGKLCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGGLC-GGGRPFFPAP 60

Query: 135 PPRF 139
           PPRF
Sbjct: 61  PPRF 63

[Close]
BLAST of CaUC10G183270 vs. ExPASy TrEMBL
Match: A0A0A0L2S1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045170 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 5.5e-21
Identity = 54/66 (81.82%), Postives = 54/66 (81.82%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLCGGGGRPFF--A 134
           MCC GKVCMLCTCLILVVV IG LFGFGVFKDGFHKIK KVDFCDGG CGGGG   F  A
Sbjct: 1   MCCVGKVCMLCTCLILVVVAIGLLFGFGVFKDGFHKIKDKVDFCDGGPCGGGGHGSFSPA 60

Query: 135 APPPRF 139
            PPP F
Sbjct: 61  PPPPPF 66

[Close]
BLAST of CaUC10G183270 vs. ExPASy TrEMBL
Match: I1M6D3 (Uncharacterized protein OS=Glycine max OX=3847 GN=102665099 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.8e-17
Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLCGGGGRPFFA-A 134
           MCC G++CMLCTCL+LVV+ IG +FGFGVFK GFHKIK  V FCD   CGGGGRPF   A
Sbjct: 1   MCCGGRICMLCTCLVLVVIAIGLVFGFGVFKHGFHKIKDTVSFCDS--CGGGGRPFIGYA 60

Query: 135 PPPRF 139
           PPP F
Sbjct: 61  PPPLF 63

[Close]
BLAST of CaUC10G183270 vs. ExPASy TrEMBL
Match: A0A1S2XMC8 (uncharacterized protein LOC101495402 OS=Cicer arietinum OX=3827 GN=LOC101495402 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17
Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDFCDGGLCGGGGRPFFA-A 134
           MCC GK+CMLCTCL+LVV+ IGF+FGFGVFK GFHK+K  V +CD    G GGRPFF  A
Sbjct: 1   MCCGGKICMLCTCLVLVVIVIGFMFGFGVFKHGFHKLKDTVSYCDSCGGGSGGRPFFGYA 60

Query: 135 PPPRF 139
           PPP F
Sbjct: 61  PPPLF 65

[Close]
BLAST of CaUC10G183270 vs. TAIR 10
Match: AT3G13275.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 29 Blast hits to 29 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 41/65 (63.08%), Postives = 47/65 (72.31%), Query Frame = 0 

Query: 75  MCCFGKVCMLCTCLILVVVTIGFLFGFGVFKDGFHKIKGKVDF-CDGGL-CGGG-GRPFF 134
           MCC G++CMLCTCL+LVV+ IGFLFGFGVFKDGFHKI   +   CD    CGGG GR  +
Sbjct: 1   MCC-GRICMLCTCLLLVVIAIGFLFGFGVFKDGFHKIHESIHLECDPRFGCGGGLGRRGY 60

Query: 135 AAPPP 137
             P P
Sbjct: 61  GFPAP 64

The following BLAST results are available for this feature:
BLAST of CaUC10G183270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022932418.15.3e-2688.06uncharacterized protein LOC111438773 [Cucurbita moschata] >XP_022932419.1 unchar... [more]
KAG7015596.19.0e-2685.51hypothetical protein SDJN02_23232, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_038905566.12.0e-2585.71uncharacterized protein Os04g0629400 [Benincasa hispida][more]
XP_008449006.17.6e-2590.63PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo][more]
KAG7028302.11.7e-2473.26hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CaUC10G183270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CaUC10G183270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EWB72.6e-2688.06uncharacterized protein LOC111438773 OS=Cucurbita moschata OX=3662 GN=LOC1114387... [more]
A0A1S3BL263.7e-2590.63uncharacterized protein LOC103491008 OS=Cucumis melo OX=3656 GN=LOC103491008 PE=... [more]
A0A0A0L2S15.5e-2181.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G045170 PE=4 SV=1[more]
I1M6D34.8e-1770.77Uncharacterized protein OS=Glycine max OX=3847 GN=102665099 PE=4 SV=1[more]
A0A1S2XMC86.3e-1769.23uncharacterized protein LOC101495402 OS=Cicer arietinum OX=3827 GN=LOC101495402 ... [more]
BLAST of CaUC10G183270 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13275.13.8e-1463.08unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36753TRANSMEMBRANE PROTEINcoord: 75..136
NoneNo IPR availablePANTHERPTHR36753:SF2TRANSMEMBRANE PROTEINcoord: 75..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC10G183270.1CaUC10G183270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane