CaUC09G175410 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G175410
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr09: 34692872 .. 34693696 (-)
RNA-Seq ExpressionCaUC09G175410
SyntenyCaUC09G175410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGTCTGTATTTAGAGAAGAAGGCATACCTATCTGCGGTTCAGTAGAACTCGAGAACTTCCCCTTTTTAGACCAAAGCCAGATCTTCGAAACAGAATAACTCTCTCCTTTAGCTACACTATTAAGCTTCTTTCCATCCAAATCTGCTTGGACTGGAGAGATGCTGTTTGATTCCGTCTCTTTAGAGGGCTGTTTATTATCACCCTCTCGTCGAGCTTTAGACAAGGCAATTCTGAGGTCAGCGTCTATAACAACGTATTGATACGATCCCATCGAATAACATCTCCTAGCATCCAAATTACTACTACTGGTCTCTCCAACTTCAGTCTCTACAGCCTCCACCGCGTCCATCCGCCTGAATTTTCCGAGTCTCACTGGGAAAACCCCCTTTTCATTCACTACCTCTTGAATTTCCATTGTTTTCTGACAATTAGGCAACCTGTGGTCTGCATTACCAGCACATTCATCTTCTTCTCCCAGATCATCGAAATCGTACATCGGATTTTCAATCGAAAAACCAGGATTAAAGAGAGTTCCTCGACAAAGAGGACACGTCGAATTTGACAAGAGCCAAGTGTCTATACAATTGACATGGAAGGCATGGCTGCACATAGGAAGTAATCTGAGTTGGTCCTTCTCAGAAAACTCACACAAACAAACAGCACAATCAAATGGCTCCTTAAGACCCACAATTTCTTTATACTGAAAAACAGGAAGTGCATCTATAAAAGCTTGATCTAAACCAGAATCATGGAGATGGAAGAGCTGCTGCAGCTGTCTCTGAAGTGCATCAGAAGGAGAAAGTTCTGGGTTTCTGTTAG

mRNA sequence

ATGGCAAGCAACCTGTGGTCTGCATTACCAGCACATTCATCTTCTTCTCCCAGATCATCGAAATCGTACATCGGATTTTCAATCGAAAAACCAGGATTAAAGAGAGTTCCTCGACAAAGAGGACACGTCGAATTTGACAAGAGCCAAAATCATGGAGATGGAAGAGCTGCTGCAGCTGTCTCTGAAGTGCATCAGAAGGAGAAAGTTCTGGGTTTCTGTTAG

Coding sequence (CDS)

ATGGCAAGCAACCTGTGGTCTGCATTACCAGCACATTCATCTTCTTCTCCCAGATCATCGAAATCGTACATCGGATTTTCAATCGAAAAACCAGGATTAAAGAGAGTTCCTCGACAAAGAGGACACGTCGAATTTGACAAGAGCCAAAATCATGGAGATGGAAGAGCTGCTGCAGCTGTCTCTGAAGTGCATCAGAAGGAGAAAGTTCTGGGTTTCTGTTAG

Protein sequence

MASNLWSALPAHSSSSPRSSKSYIGFSIEKPGLKRVPRQRGHVEFDKSQNHGDGRAAAAVSEVHQKEKVLGFC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G175410.1CaUC09G175410.1mRNA