![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CaUC09G174770 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTTGGTAGCAGATCCAAAAATTGGATTGTAAGTTAAACCATTGTTTAAAATATGTTTGATAATATATATTTATAAATCACAAAACTAATTGTAGTTATTCACTCATATTTAATTGACATTTGACTATAAGGTATTACTAATTTAACTGTGAATATAATTTATGTTAAAGAAATTATATAACTATCATTTTGAAATATTATATAATTTATAATACATTATATAATACATATTATACATATATTTTTTTTAAAAAAATGAATTGAGCTTCTGACATGATATATTGTATTTGTAAATGTTTTTAATTTTTATTTAATATAATTATGCATTTTAAAATTTACAATTTAAAATCGGGATACAATGAAAACATAAAAATATTGTTTTCGAAATTTGCACGATTTCACCGAACCAAATCATGTACAGAATCCAAAAATATTTTTGAATCTAAAAACATGATTCTCATCGAACAGAGCAAATGGATAGAAATATTATAGTAACCAAAGTTATAGTGGTGGTAATAAAAATAACCAAATCTAAAACTAAATAGATTCTACCCTGAAAGAAAAGAATTAAAATTTGAGAGACCATAATTAAGAGATGAAAAAAAGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAACAAATGTCAACCTGAGTCTAACTAGTTAAAGACTTATCTTGAATGTTCAAATGTTTGTAATAATTTTCTAAAAACATAGAAGAAGTTGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGGAAAAAGAAAAAGAAAACATGAATAAATATTTTACAAGTCCCGGTAGAGCGCGAGGACTGTGGAGTAATGAAATAAAATCCAAAAACTGTTTGAAAAACCAGAGAATGCTACGTGTCATCAAATGATTGCAGTGAGAGAGGGACCACAAAGGCTTTAATTATTATTATTATTATTATTTTATAAATTTTGATTGAGGCAACCAACTTCTTTTTAGTCTCATTACGTATAGTAGCGTAGGGTTTAAAATAATTTAAGGGAAGGATAGCATCGTAAATTGTGTGTACTTGGGAGGTCATTTCCGTCAATCTGAAAAAGAGGACATTTTAAAATAAAAAAAAAAAAAAAAGAAATTAAACCCTCTGTAAATACTTACTGAATCTGAAGGTATATATATAATAATATTATTTAATAAGTGAAAGCGGTGTCGTTTAGGAGTGGACATTAAAATGTGGGTTTTTGTTTAGACAAAACCCCGGATTCAAGTTTCAACGTCCTAAAATTCCTTTGAAGCCGACATAAATACCTTCCACTTCCAGCCGTAATATCCAACTGGATTTCAATAAATCTACTCCACCATCCTCCTTTAAAAAGACAAATCTACCCCTCCCCACTTCCACTTAAATTTTCAAATCCAATCCAACACCATATTCGTCATTACGCTAGAAAATACACAGGGGTTGGCAATATCAAAAATCTTCAACAAAAATAAAAATTAAATAAAGTAACTTTAAAAGCGGTCCAGTCCTTACTGCAAGTTGGCAAAAAATTTAACATGGTTTTGCAGTGTATTGTCTATGGTCCTCCATCAGCTATAGTTATATTTTAAATTTTTGTAAAGATAAATAATTATCTAATTCCCCGGGTCAACTCACTCCTGACCGAGTCATTATTGTTCCAAGACCCTCAATCAAAAAGGCCTAATAACTCGGAATTCTGACTCATTTAATTAAAAAAACAAAATTACTTGCTACTTCCTTCCTACTACTCAGTGGTTGAATTGAGGTATATTTATTACACATGCAACAACTATCCTCAAACTGGGTCCACCCAACTTAACCATAGATTATAACTAGGGTTAAAGTGAAGAAGTGGGTTAACAAAGGACAACCACAAAAATGAAAAACCTCTGATTTTTATTATCGACACAACACCCTTTACCTAATTTCCTTATTCCTTTTTCTGTCATTTCTCTTCCTCACTATCATTTTTCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGTTGGGGACTAAACTAGAAGTAGACCCAATTCTTTATTATTGTGTGTTGTTATGGGTAAGGATTTTAATTTTTACAGAAAGGTTAATGTTATGCTCAATTTTATTTGTAGTTGTGGTTGTTTAATTGTGGATGTTTAGAGAGGGTTTTTTTTTTTTTTCCTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTTCTGTATGTGAGTGTTTGAGAGAGCCATGGATTTAGCCCCAGCTCCCATCACAACTAGTAGTAATAACACCAAATCTCCCGACGCTGACTCCGATACTCCGACAAAGATTCCGCCGTCTTCTTCCCTAAAATCCCTTCCCTTCACCAATGGTGTTCTCAAGCGCCACCATCACCGTCAACCGTCTGTCATTGTTTCTTACAAAGAATGTCTCAAAAATCACGCTGCCAGTTTAGGAGCTCACGCCTTGGATGGATGTGGCGAATTTATGCCTTCCCCTTCTGCCACACCCACTGATCCCACATCGCTTAAATGCGCCGCATGCGGCTGTCACCGGAATTTCCACCGCCGTGACCCGGAAGACCCAATCTCAACTTTAGCTATCAATACGGCGCCTACTCATGTTATTGAGTATCAGCCTCACCACCGTCATCACCCCCCACCGCCGTCGCTTCCCGGGAACCGAAGCCCGAATTCGGCATCTCCTCCGCCGATCTCGTCGTCGTACTACCCATCTGCGCCGCATATGCTACTGGCGCTTTCAGCCGGGTTGTCGGGTCGTCCGCCGGAAAATATCACTCAGGGGAATAATTCGGTGCTGACGGTGAGTCCGAACACCCGGAAACGGTTTCGGACGAAATTTAGCAATGAGCAGAAGGAAAAAATGCTGGATTTCGCGGAACGAGTTGGATGGAAAATGCAAAAGAGAGATGAAGATTTGGTTCGAGATTTTTGCAATCAAGTTGGAGTTGAAAGAGGAGTTCTCAAAGTATGGATGCATAACAACAAGAATACCATGGGAAAAAAGCCCGACTCCAATGGCACCACCACCGCCGCCGCCGCAACCGCCGCCGTCAACAACAACGAAGATGGACCAGATGGAGGCTTACATATGCATGTTGGCTCAAATGGGTCATCTTCTTCTTCTTGA ATGTGTTTGGTAGCAGATCCAAAAATTGGATTAGAATGCTACGTGTCATCAAATGATTGCATCTCATTACGTATAGTAGCCCGACATAAATACCTTCCACTTCCAGCCTTGGGGACTAAACTAGAAGTAGACCCAATTCTTTATTATTTGTTTGAGAGAGCCATGGATTTAGCCCCAGCTCCCATCACAACTAGTAGTAATAACACCAAATCTCCCGACGCTGACTCCGATACTCCGACAAAGATTCCGCCGTCTTCTTCCCTAAAATCCCTTCCCTTCACCAATGGTGTTCTCAAGCGCCACCATCACCGTCAACCGTCTGTCATTGTTTCTTACAAAGAATGTCTCAAAAATCACGCTGCCAGTTTAGGAGCTCACGCCTTGGATGGATGTGGCGAATTTATGCCTTCCCCTTCTGCCACACCCACTGATCCCACATCGCTTAAATGCGCCGCATGCGGCTGTCACCGGAATTTCCACCGCCGTGACCCGGAAGACCCAATCTCAACTTTAGCTATCAATACGGCGCCTACTCATGTTATTGAGTATCAGCCTCACCACCGTCATCACCCCCCACCGCCGTCGCTTCCCGGGAACCGAAGCCCGAATTCGGCATCTCCTCCGCCGATCTCGTCGTCGTACTACCCATCTGCGCCGCATATGCTACTGGCGCTTTCAGCCGGGTTGTCGGGTCGTCCGCCGGAAAATATCACTCAGGGGAATAATTCGGTGCTGACGGTGAGTCCGAACACCCGGAAACGGTTTCGGACGAAATTTAGCAATGAGCAGAAGGAAAAAATGCTGGATTTCGCGGAACGAGTTGGATGGAAAATGCAAAAGAGAGATGAAGATTTGGTTCGAGATTTTTGCAATCAAGTTGGAGTTGAAAGAGGAGTTCTCAAAGTATGGATGCATAACAACAAGAATACCATGGGAAAAAAGCCCGACTCCAATGGCACCACCACCGCCGCCGCCGCAACCGCCGCCGTCAACAACAACGAAGATGGACCAGATGGAGGCTTACATATGCATGTTGGCTCAAATGGGTCATCTTCTTCTTCTTGA ATGTGTTTGGTAGCAGATCCAAAAATTGGATTAGAATGCTACGTGTCATCAAATGATTGCATCTCATTACGTATAGTAGCCCGACATAAATACCTTCCACTTCCAGCCTTGGGGACTAAACTAGAAGTAGACCCAATTCTTTATTATTTGTTTGAGAGAGCCATGGATTTAGCCCCAGCTCCCATCACAACTAGTAGTAATAACACCAAATCTCCCGACGCTGACTCCGATACTCCGACAAAGATTCCGCCGTCTTCTTCCCTAAAATCCCTTCCCTTCACCAATGGTGTTCTCAAGCGCCACCATCACCGTCAACCGTCTGTCATTGTTTCTTACAAAGAATGTCTCAAAAATCACGCTGCCAGTTTAGGAGCTCACGCCTTGGATGGATGTGGCGAATTTATGCCTTCCCCTTCTGCCACACCCACTGATCCCACATCGCTTAAATGCGCCGCATGCGGCTGTCACCGGAATTTCCACCGCCGTGACCCGGAAGACCCAATCTCAACTTTAGCTATCAATACGGCGCCTACTCATGTTATTGAGTATCAGCCTCACCACCGTCATCACCCCCCACCGCCGTCGCTTCCCGGGAACCGAAGCCCGAATTCGGCATCTCCTCCGCCGATCTCGTCGTCGTACTACCCATCTGCGCCGCATATGCTACTGGCGCTTTCAGCCGGGTTGTCGGGTCGTCCGCCGGAAAATATCACTCAGGGGAATAATTCGGTGCTGACGGTGAGTCCGAACACCCGGAAACGGTTTCGGACGAAATTTAGCAATGAGCAGAAGGAAAAAATGCTGGATTTCGCGGAACGAGTTGGATGGAAAATGCAAAAGAGAGATGAAGATTTGGTTCGAGATTTTTGCAATCAAGTTGGAGTTGAAAGAGGAGTTCTCAAAGTATGGATGCATAACAACAAGAATACCATGGGAAAAAAGCCCGACTCCAATGGCACCACCACCGCCGCCGCCGCAACCGCCGCCGTCAACAACAACGAAGATGGACCAGATGGAGGCTTACATATGCATGTTGGCTCAAATGGGTCATCTTCTTCTTCTTGA MCLVADPKIGLECYVSSNDCISLRIVARHKYLPLPALGTKLEVDPILYYLFERAMDLAPAPITTSSNNTKSPDADSDTPTKIPPSSSLKSLPFTNGVLKRHHHRQPSVIVSYKECLKNHAASLGAHALDGCGEFMPSPSATPTDPTSLKCAACGCHRNFHRRDPEDPISTLAINTAPTHVIEYQPHHRHHPPPPSLPGNRSPNSASPPPISSSYYPSAPHMLLALSAGLSGRPPENITQGNNSVLTVSPNTRKRFRTKFSNEQKEKMLDFAERVGWKMQKRDEDLVRDFCNQVGVERGVLKVWMHNNKNTMGKKPDSNGTTTAAAATAAVNNNEDGPDGGLHMHVGSNGSSSSS Homology
BLAST of CaUC09G174770 vs. NCBI nr
Match: XP_038891176.1 (zinc-finger homeodomain protein 10-like [Benincasa hispida]) HSP 1 Score: 543.5 bits (1399), Expect = 1.3e-150 Identity = 279/301 (92.69%), Postives = 282/301 (93.69%), Query Frame = 0
BLAST of CaUC09G174770 vs. NCBI nr
Match: XP_011655994.1 (zinc-finger homeodomain protein 10 [Cucumis sativus] >KGN52458.1 hypothetical protein Csa_009236 [Cucumis sativus]) HSP 1 Score: 536.6 bits (1381), Expect = 1.6e-148 Identity = 276/314 (87.90%), Postives = 282/314 (89.81%), Query Frame = 0
BLAST of CaUC09G174770 vs. NCBI nr
Match: XP_008467057.1 (PREDICTED: zinc-finger homeodomain protein 10-like [Cucumis melo]) HSP 1 Score: 534.3 bits (1375), Expect = 8.2e-148 Identity = 276/322 (85.71%), Postives = 283/322 (87.89%), Query Frame = 0
BLAST of CaUC09G174770 vs. NCBI nr
Match: ABY61030.1 (zinc finger-homeodomain protein 1, partial [Cucumis sativus]) HSP 1 Score: 523.1 bits (1346), Expect = 1.9e-144 Identity = 270/309 (87.38%), Postives = 276/309 (89.32%), Query Frame = 0
BLAST of CaUC09G174770 vs. NCBI nr
Match: XP_022989826.1 (zinc-finger homeodomain protein 10-like [Cucurbita maxima]) HSP 1 Score: 487.3 bits (1253), Expect = 1.1e-133 Identity = 251/309 (81.23%), Postives = 269/309 (87.06%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy Swiss-Prot
Match: Q9FIW9 (Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 2.1e-82 Identity = 171/319 (53.61%), Postives = 208/319 (65.20%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 2.9e-79 Identity = 168/311 (54.02%), Postives = 211/311 (67.85%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy Swiss-Prot
Match: Q9LXG0 (Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 3.5e-61 Identity = 136/257 (52.92%), Postives = 165/257 (64.20%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy Swiss-Prot
Match: Q6ER21 (Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD9 PE=3 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 2.8e-50 Identity = 126/285 (44.21%), Postives = 161/285 (56.49%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy Swiss-Prot
Match: Q9SEZ1 (Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 6.9e-49 Identity = 117/236 (49.58%), Postives = 143/236 (60.59%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy TrEMBL
Match: A0A0A0KSA4 (ZF-HD dimerization-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G636510 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 8.0e-149 Identity = 276/314 (87.90%), Postives = 282/314 (89.81%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy TrEMBL
Match: A0A1S3CST8 (zinc-finger homeodomain protein 10-like OS=Cucumis melo OX=3656 GN=LOC103504491 PE=4 SV=1) HSP 1 Score: 534.3 bits (1375), Expect = 4.0e-148 Identity = 276/322 (85.71%), Postives = 283/322 (87.89%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy TrEMBL
Match: B0LK19 (Zinc finger-homeodomain protein 1 (Fragment) OS=Cucumis sativus OX=3659 GN=ZHD1 PE=2 SV=1) HSP 1 Score: 523.1 bits (1346), Expect = 9.1e-145 Identity = 270/309 (87.38%), Postives = 276/309 (89.32%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy TrEMBL
Match: A0A6J1JL86 (zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111486897 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 5.6e-134 Identity = 251/309 (81.23%), Postives = 269/309 (87.06%), Query Frame = 0
BLAST of CaUC09G174770 vs. ExPASy TrEMBL
Match: A0A6J1GSV4 (zinc-finger homeodomain protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111457184 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 1.0e-132 Identity = 248/311 (79.74%), Postives = 266/311 (85.53%), Query Frame = 0
BLAST of CaUC09G174770 vs. TAIR 10
Match: AT5G39760.1 (homeobox protein 23 ) HSP 1 Score: 307.4 bits (786), Expect = 1.5e-83 Identity = 171/319 (53.61%), Postives = 208/319 (65.20%), Query Frame = 0
BLAST of CaUC09G174770 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 ) HSP 1 Score: 297.0 bits (759), Expect = 2.0e-80 Identity = 168/311 (54.02%), Postives = 211/311 (67.85%), Query Frame = 0
BLAST of CaUC09G174770 vs. TAIR 10
Match: AT5G15210.1 (homeobox protein 30 ) HSP 1 Score: 236.9 bits (603), Expect = 2.5e-62 Identity = 136/257 (52.92%), Postives = 165/257 (64.20%), Query Frame = 0
BLAST of CaUC09G174770 vs. TAIR 10
Match: AT1G69600.1 (zinc finger homeodomain 1 ) HSP 1 Score: 196.1 bits (497), Expect = 4.9e-50 Identity = 117/236 (49.58%), Postives = 143/236 (60.59%), Query Frame = 0
BLAST of CaUC09G174770 vs. TAIR 10
Match: AT1G14440.1 (homeobox protein 31 ) HSP 1 Score: 159.8 bits (403), Expect = 3.9e-39 Identity = 97/258 (37.60%), Postives = 141/258 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|