CaUC09G168440 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC09G168440
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
Location	Ciama_Chr09: 11202094 .. 11203035 (-)
RNA-Seq Expression	CaUC09G168440
Synteny	CaUC09G168440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACAGAGACCCATTGGATTTTTCCATCTCTAATGGCGATTTCTCTCAATCTTCTTCAACTTCAACCAAATCCAGCGCGGCCCAAGTTCTTCAAGTGGAACCCCGTCCGACCGGCGGTTCATTTCAGAGCTCCGGCGAGGTTGACCGTCGTCATGTCACAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCAAAGGACCCGCCGGCGGTGTACGAGCCGTTGGGCCATTTTGTCTTCTCGGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCGGCCGAGACCAGGCCATTGTGGCGGCTACTGCACTGCAACTCATCCACGCTGCAACCTATACTCGGGAATACCCTCCACTGACGGCACGTGCAATCTCACGCGCCGCCGTCGTTGACCGCGTTTATGGCCCCAACATCCAGCTGTTGACAGGGGACGGAATAGCACCGATGGTGTTCGAGATTCTAGCGGGATCTTGCGATTGGAGCGAGAGCGGGTCGGAGCGGATTCGACGCGTGATGGTGGAAATGGCACGTGCGATGGGTACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGACGGCAACGGCGGAGGAAGTGAGCGAGAAGACGGAAGGTGGGCTACACGCGTGTGGGGGCGCGTGTGGGGTGATATTGGGAGGTGGAAATGAAGAGGAAATAGAGAAGATGAGGAAATATGGGAAATTGGTGGGGATGGTGAAAGGAATGTCAAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGAGGAGTTGAAGAATTTGGCTTTCAAGGAATTGAAAGATTTCAAAGGAGAAAATGTTCATGAGATCTATGGATTCCTTGATTTTGAGGGACTTTAG

mRNA sequence

ATGTCCACAGAGACCCATTGGATTTTTCCATCTCTAATGGCGATTTCTCTCAATCTTCTTCAACTTCAACCAAATCCAGCGCGGCCCAAGTTCTTCAAGTGGAACCCCGTCCGACCGGCGGTTCATTTCAGAGCTCCGGCGAGGTTGACCGTCGTCATGTCACAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCAAAGGACCCGCCGGCGGTGTACGAGCCGTTGGGCCATTTTGTCTTCTCGGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCGGCCGAGACCAGGCCATTGTGGCGGCTACTGCACTGCAACTCATCCACGCTGCAACCTATACTCGGGAATACCCTCCACTGACGGCACGTGCAATCTCACGCGCCGCCGTCGTTGACCGCGTTTATGGCCCCAACATCCAGCTGTTGACAGGGGACGGAATAGCACCGATGGTGTTCGAGATTCTAGCGGGATCTTGCGATTGGAGCGAGAGCGGGTCGGAGCGGATTCGACGCGTGATGGTGGAAATGGCACGTGCGATGGGTACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGACGGCAACGGCGGAGGAAGTGAGCGAGAAGACGGAAGGTGGGCTACACGCGTGTGGGGGCGCGTGTGGGGTGATATTGGGAGGTGGAAATGAAGAGGAAATAGAGAAGATGAGGAAATATGGGAAATTGGTGGGGATGGTGAAAGGAATGTCAAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGAGGAGTTGAAGAATTTGGCTTTCAAGGAATTGAAAGATTTCAAAGGAGAAAATGTTCATGAGATCTATGGATTCCTTGATTTTGAGGGACTTTAG

Coding sequence (CDS)

ATGTCCACAGAGACCCATTGGATTTTTCCATCTCTAATGGCGATTTCTCTCAATCTTCTTCAACTTCAACCAAATCCAGCGCGGCCCAAGTTCTTCAAGTGGAACCCCGTCCGACCGGCGGTTCATTTCAGAGCTCCGGCGAGGTTGACCGTCGTCATGTCACAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCAAAGGACCCGCCGGCGGTGTACGAGCCGTTGGGCCATTTTGTCTTCTCGGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCGGCCGAGACCAGGCCATTGTGGCGGCTACTGCACTGCAACTCATCCACGCTGCAACCTATACTCGGGAATACCCTCCACTGACGGCACGTGCAATCTCACGCGCCGCCGTCGTTGACCGCGTTTATGGCCCCAACATCCAGCTGTTGACAGGGGACGGAATAGCACCGATGGTGTTCGAGATTCTAGCGGGATCTTGCGATTGGAGCGAGAGCGGGTCGGAGCGGATTCGACGCGTGATGGTGGAAATGGCACGTGCGATGGGTACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGACGGCAACGGCGGAGGAAGTGAGCGAGAAGACGGAAGGTGGGCTACACGCGTGTGGGGGCGCGTGTGGGGTGATATTGGGAGGTGGAAATGAAGAGGAAATAGAGAAGATGAGGAAATATGGGAAATTGGTGGGGATGGTGAAAGGAATGTCAAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGAGGAGTTGAAGAATTTGGCTTTCAAGGAATTGAAAGATTTCAAAGGAGAAAATGTTCATGAGATCTATGGATTCCTTGATTTTGAGGGACTTTAG

Protein sequence

MSTETHWIFPSLMAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAATYTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRVMVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDFEGL

Homology

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BLAST of CaUC09G168440 vs. NCBI nr
Match: XP_038896497.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 544.3 bits (1401), Expect = 7.0e-151
Identity = 269/301 (89.37%), Postives = 284/301 (94.35%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQLQ NPARPKF KWNPVRPAV+FRAPAR TVVMSQITPSYWA INEDIEDHL
Sbjct: 1   MAISLNLLQLQANPARPKFLKWNPVRPAVYFRAPARSTVVMSQITPSYWATINEDIEDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           R+VIPAKDPPAV+EPLGHF+FSAPRNSAPALCIAACELVGG RD+A+ AATALQLIHAAT
Sbjct: 61  RQVIPAKDPPAVFEPLGHFIFSAPRNSAPALCIAACELVGGRRDKAMAAATALQLIHAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
           YTREYPPLTAR ISRAAVVDR+YG NIQLLTGD IAP+VFEILAGSCDWSESGSER++ V
Sbjct: 121 YTREYPPLTAREISRAAVVDRIYGANIQLLTGDAIAPIVFEILAGSCDWSESGSERVQHV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVEMARAMGTEGW+GGQFRGLEE ATAEEVSEKTEGGLHACGGACG ILGGG+EEEIEKM
Sbjct: 181 MVEMARAMGTEGWVGGQFRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDFEG 312
           RKYGKLVGMVKG+SKNVFGGKENERK+EKIEE K LAFK L+ FKGE VHEIYGFLDFEG
Sbjct: 241 RKYGKLVGMVKGLSKNVFGGKENERKREKIEEFKVLAFKVLEGFKGEKVHEIYGFLDFEG 300

Query: 313 L 314
           L
Sbjct: 301 L 301

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BLAST of CaUC09G168440 vs. NCBI nr
Match: KAA0031902.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 486.1 bits (1250), Expect = 2.3e-133
Identity = 247/301 (82.06%), Postives = 266/301 (88.37%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQLQPN ARPKFF+ N V PA + R P R TV MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVIP KDP AVYEPLGHF+ SAPRNSA ALCIAACELVGG RDQA+ AATA+QLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
            T EYPPLTA   +RAAVV+RVY P+IQL+TGDGIAPM FEILA SCDWSE GSER+RRV
Sbjct: 121 CTHEYPPLTASG-TRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVE++RAMGTEGWIGGQFRGL+E AT EEV EK EGGLHACGGACG I+GGGNEEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDFEG 312
           RKYGKLVGMVKG++KNVFGGKENE+K+EKIEELK LAFKEL+ F GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300

Query: 313 L 314
           L
Sbjct: 301 L 300

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BLAST of CaUC09G168440 vs. NCBI nr
Match: XP_023536167.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.6e-131
Identity = 246/301 (81.73%), Postives = 267/301 (88.70%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQL  NP+ PKF   N +RPAV+FRAPAR TVVMSQITPSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVI AKDPPAVYEPLGHFVFSAPRNSA A+CIAACELVGG RDQA+ AATALQLI+AAT
Sbjct: 61  RRVIIAKDPPAVYEPLGHFVFSAPRNSAAAMCIAACELVGGHRDQAMAAATALQLIYAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
           YTREYPPLTAR IS AAVVDRVYGPNIQLLTG GIAP+ FEILAGSCD SESGSER+RRV
Sbjct: 121 YTREYPPLTARGISNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVEMARAMG+EGWIGGQF+ LEE   AEEV E TEG LHA GGACG ILGGG+EEEIEKM
Sbjct: 181 MVEMARAMGSEGWIGGQFKELEEVTAAEEVIEMTEGELHARGGACGAILGGGSEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDFEG 312
           RKYG++VGMVKG+SK VFGGKENERK+EKI+ELK LAFKEL+ FKG+ V ++  F DFEG
Sbjct: 241 RKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGQKVDQMCNFFDFEG 300

Query: 313 L 314
           L
Sbjct: 301 L 301

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BLAST of CaUC09G168440 vs. NCBI nr
Match: XP_004139865.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis sativus] >KGN44166.1 hypothetical protein Csa_016347 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 3.6e-131
Identity = 242/298 (81.21%), Postives = 262/298 (87.92%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQLQPN ARPKFF+ N + P  + R P R   VMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVIP KDP AVYEPLGHF+FSAPRNSAPALCIAACELVGG RDQA+ AATA+QLI+AAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
            T EYPPLTAR   RA+VVDRVYG N+QL+TGDGI PM FEILA SCDWSE GSER+RRV
Sbjct: 121 CTHEYPPLTARG-KRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVE+ARAMGTEGWIGGQFRGLEE AT EEV EKTEGGLHACGGACG I+GGGNEEEIEKM
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDF 311
           RKYGKLVG+VKG+++ VFGGKENERK+EKIEELK LAFKEL+ F GE V +IYGFLDF
Sbjct: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 297

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BLAST of CaUC09G168440 vs. NCBI nr
Match: KAG6592047.1 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024925.1 Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469.2 bits (1206), Expect = 2.9e-128
Identity = 244/304 (80.26%), Postives = 262/304 (86.18%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQL  NP+ PKF   N +RPAV+FRAPAR TVVMSQITPSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVI AKDPP VYEPL HFVFSAPRNSA A+CIAACELVGG RDQA+ AATALQLI+AAT
Sbjct: 61  RRVIIAKDPPEVYEPLSHFVFSAPRNSAAAMCIAACELVGGRRDQAMAAATALQLIYAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
           YTREYPPLTAR  S AAVVDRVYGPNIQLLTG GIAP+ FEILAGSCD SESGSER+RRV
Sbjct: 121 YTREYPPLTARGSSNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATA---EEVSEKTEGGLHACGGACGVILGGGNEEEI 252
           M EMARAMG+EGWIGGQF+ LEE   A   EEV E TEG LHA GGACG ILGGGNEEEI
Sbjct: 181 MAEMARAMGSEGWIGGQFKELEEVTAAVETEEVIEMTEGELHARGGACGAILGGGNEEEI 240

Query: 253 EKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLD 312
           EKMRKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKEL+ FKGE V ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKINELKALAFKELEGFKGEKVDQMCNFFD 300

Query: 313 FEGL 314
           FEGL
Sbjct: 301 FEGL 304

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BLAST of CaUC09G168440 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 6.0e-28
Identity = 83/268 (30.97%), Postives = 132/268 (49.25%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFS-APRNSAPALCIAACELVGGGRDQ 118
           +YW  +  +I   L   IP K P  +YE + + V +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 119 AIVAATALQLIHAATYTR-EYPPLTARAISRAAVVDR-VYGPNIQLLTGDGIAPMVFEIL 178
           A   A AL+++HAA+    + P +    + R    +  VYG  + +L GD + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168

Query: 179 AGSCDWSESGSERIRRVMVEMARAMGTEGWIGGQFRGLE-ETATAEEVSEKTEGGLHACG 238
                        I R++ E+AR +G+ G   GQ+  LE        V EK  G +  C 
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228

Query: 239 GACGVILGGGNEEEIEKMRKYGKLVGMVKGM-------SKNVFGGKENERKKEKIEELKN 298
             CG +LGG  E+E++ +R+YG+ VGM+  +        K  + G   +   E  EELK 
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288

Query: 299 LAFKELKDFK-----GENVHEIYGFLDF 311
            A KEL+ F      G+ +  +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316

[Close]

BLAST of CaUC09G168440 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.4e-22
Identity = 68/213 (31.92%), Postives = 108/213 (50.70%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQA 118
           SY       I   L   IP ++P  ++E + + + +  +   PALC+AACELVGG    A
Sbjct: 81  SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140

Query: 119 IVAATALQLIHAATYTR-EYPPLTARAISRAAVVDR-VYGPNIQLLTGDGIAPMVFEILA 178
           + AA A+++IH  +    + P +    + R    +  V+G ++ +L GD +    FE +A
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIA 200

Query: 179 GSCDWSESGSERIRRVMVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTE-------GG 238
            S       S RI R + E+A+A+G EG + GQ   +    ++E   EK E         
Sbjct: 201 VST--LNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAK 260

Query: 239 LHACGGACGVILGGGNEEEIEKMRKYGKLVGMV 263
           L       G ILGGG +EE+EK+RKY + +G++
Sbjct: 261 LLEGAVVLGAILGGGTDEEVEKLRKYARDIGLL 291

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BLAST of CaUC09G168440 vs. ExPASy Swiss-Prot
Match: Q9LHR4 (Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g32040 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 71/216 (32.87%), Postives = 110/216 (50.93%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQA 118
           SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 119 IVAATALQLIHAATYTREYPPLTARAISRAA--VVDRVYGPNIQLLTGDGIAPMVFEILA 178
           + AA A+++IH ++   +  P    A  R       +V+G ++ +L GD +  + FE + 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMT 187

Query: 179 GSCDWSESGSERIRRVMVEMARAMGTEGWIGGQF-----RGLEETATAEEVSE-----KT 238
                     ER+ R + E+A+A+GT+G + GQ      +GL       E  E     KT
Sbjct: 188 -VVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKT 247

Query: 239 EGGLHACGGACGVILGGGNEEEIEKMRKYGKLVGMV 263
              L A     G I+GGG EEEI+K+RKYG+ +G++
Sbjct: 248 AALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLL 281

[Close]

BLAST of CaUC09G168440 vs. ExPASy Swiss-Prot
Match: Q9LUD9 (Geranylgeranyl pyrophosphate synthase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPP3 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 84/268 (31.34%), Postives = 125/268 (46.64%), Query Frame = 0


Query: 66  EDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATAL 125
           E +   L   +P ++P  V E + + + +  +   P LCIA CELVGG    A+ AA A+
Sbjct: 75  ESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 134

Query: 126 QLIHAATYTREYPPLTARAISRAA--VVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSE 185
           ++IH ++   +  P    A  R       +VYG ++ +L GD +  + FE +        
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMT-VVSSGL 194

Query: 186 SGSERIRRVMVEMARAMGTEGWIGGQFRGL-EETATAEEVS---------EKTEGGLHAC 245
              ER+ R +VE+ARA+GT G + GQ   L  E    ++V           KT   L A 
Sbjct: 195 VAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALLEA- 254

Query: 246 GGACGVILGGGNEEEIEKMRKYGKLVGMV------------------KGMSKNVFGGKEN 297
               GVI+GGG EEEIEK+RKY + +G++                  K   K+V  GK  
Sbjct: 255 AAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLT 314

[Close]

BLAST of CaUC09G168440 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 2.7e-20
Identity = 66/216 (30.56%), Postives = 111/216 (51.39%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQA 118
           SY     E +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 119 IVAATALQLIHAATYTR-EYPPLTARAISRAAVVD-RVYGPNIQLLTGDGIAPMVFEILA 178
           + AA A+++IH  +    + P +    + R    + +V+G ++ +L GD +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 179 GSCDWSESGSERIRRVMVEMARAMGTEGWIGGQF-----RGLEETATAEEVSE-----KT 238
            +         R+ R + E+A+A+GTEG + GQ       GL+      E  E     KT
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 239 EGGLHACGGACGVILGGGNEEEIEKMRKYGKLVGMV 263
              L A     G I+GGG+++EIE++RK+ + +G++
Sbjct: 258 AALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLL 292

[Close]

BLAST of CaUC09G168440 vs. ExPASy TrEMBL
Match: A0A5A7SLD5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29549G00010 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.1e-133
Identity = 247/301 (82.06%), Postives = 266/301 (88.37%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQLQPN ARPKFF+ N V PA + R P R TV MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVIP KDP AVYEPLGHF+ SAPRNSA ALCIAACELVGG RDQA+ AATA+QLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
            T EYPPLTA   +RAAVV+RVY P+IQL+TGDGIAPM FEILA SCDWSE GSER+RRV
Sbjct: 121 CTHEYPPLTASG-TRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVE++RAMGTEGWIGGQFRGL+E AT EEV EK EGGLHACGGACG I+GGGNEEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDFEG 312
           RKYGKLVGMVKG++KNVFGGKENE+K+EKIEELK LAFKEL+ F GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300

Query: 313 L 314
           L
Sbjct: 301 L 300

[Close]

BLAST of CaUC09G168440 vs. ExPASy TrEMBL
Match: A0A0A0K8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.7e-131
Identity = 242/298 (81.21%), Postives = 262/298 (87.92%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQLQPN ARPKFF+ N + P  + R P R   VMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVIP KDP AVYEPLGHF+FSAPRNSAPALCIAACELVGG RDQA+ AATA+QLI+AAT
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
            T EYPPLTAR   RA+VVDRVYG N+QL+TGDGI PM FEILA SCDWSE GSER+RRV
Sbjct: 121 CTHEYPPLTARG-KRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVE+ARAMGTEGWIGGQFRGLEE AT EEV EKTEGGLHACGGACG I+GGGNEEEIEKM
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLDF 311
           RKYGKLVG+VKG+++ VFGGKENERK+EKIEELK LAFKEL+ F GE V +IYGFLDF
Sbjct: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 297

[Close]

BLAST of CaUC09G168440 vs. ExPASy TrEMBL
Match: A0A6J1IK44 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111475905 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.9e-126
Identity = 239/304 (78.62%), Postives = 262/304 (86.18%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQL  NP+ PKF   N +RPAV+FRAP R TVVMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RR+I AKDPP VYEPLGHFVFSAPRNSA A+CIAACE VGG RDQA+ AATALQLI+AAT
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
           YTREYPPLTAR  S AA+VDRVY PNIQLLTG GIAP+ FEILAGSCD SESGS+R+RRV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEE---TATAEEVSEKTEGGLHACGGACGVILGGGNEEEI 252
           M EMARAMG+EGWIGGQF+ LEE    A AEEV EKTEG LHA GGACG ILG G+EEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 253 EKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLD 312
           EKMRKYG++VGMVKG+SK VFGGKENERK+EKI+ELK LAFKEL+ FKGE V ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

Query: 313 FEGL 314
           FEGL
Sbjct: 301 FEGL 304

[Close]

BLAST of CaUC09G168440 vs. ExPASy TrEMBL
Match: A0A1S4DWU7 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990910 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 3.5e-108
Identity = 206/268 (76.87%), Postives = 225/268 (83.96%), Query Frame = 0


Query: 13  MAISLNLLQLQPNPARPKFFKWNPVRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHL 72
           MAISLNLLQLQPN ARPKFF+ N V PA + R P R TV MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 73  RRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAAT 132
           RRVIP KDP AVYEPLGHF+ SAPRNSA ALCIAACELVGG RDQA+ AATA+QLIHAAT
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 133 YTREYPPLTARAISRAAVVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRV 192
            T EYPPLTA   +RAAVV+RVY P+IQL+TGDGIAPM FEILA SCDWSE GSER+RRV
Sbjct: 121 CTHEYPPLTASG-TRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 193 MVEMARAMGTEGWIGGQFRGLEETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKM 252
           MVE++RAMGTEGWIGGQFRGL+E AT EEV EK EGGLHACGGACG I+GGGNEEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 253 RKYGKLVGMVKGMSKNVFGGKENERKKE 281
           RKYGKL+       +  +  +  ER+KE
Sbjct: 241 RKYGKLI------EERRWRNRRQERRKE 261

[Close]

BLAST of CaUC09G168440 vs. ExPASy TrEMBL
Match: A0A2N9F8D7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.8e-67
Identity = 142/284 (50.00%), Postives = 198/284 (69.72%), Query Frame = 0


Query: 37  VRPAVHFRAPARLTVVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAP 96
           VRP++  R+   + + MSQ   SYWA++N +IE HL++ IP + P  V+EP+ H VF+AP
Sbjct: 23  VRPSLPHRS---MMITMSQ-NQSYWASVNSEIEAHLKQAIPLRPPLQVFEPMHHLVFAAP 82

Query: 97  RNSAPALCIAACELVGGGRDQAIVAATALQLIHAATYTREYPPLTARAISRA-AVVDRVY 156
           +N+APALC+AACELVGG RDQA+ AA+AL L+HAA++T E+ PLT R   ++  V+   Y
Sbjct: 83  QNTAPALCLAACELVGGHRDQAMAAASALHLMHAASFTHEHLPLTDRPRPKSRPVIHHAY 142

Query: 157 GPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRRVMVEMARAMGTEGWIGGQFRGLE- 216
           GPNI+LL GD I P  FE+LA S D +++ S+RI RV +E+ RAMG++G + GQ+  LE 
Sbjct: 143 GPNIELLLGDAIIPFGFELLARSDDPAQNNSDRILRVTIEITRAMGSQGMVEGQYYELEC 202

Query: 217 ---------ETATAEEVSEKTEGGLHACGGACGVILGGGNEEEIEKMRKYGKLVGMVKGM 276
                    +    E+V +K EGGLHACG ACG ILGGG+EEEIEK+R++G  VGM++GM
Sbjct: 203 PQSDGEELCDVGWIEQVCKKKEGGLHACGAACGAILGGGSEEEIEKLRRFGLYVGMIQGM 262

Query: 277 SKNVFGGKENERKKEKIEELKNLAFKELKDFKGENVHEIYGFLD 310
                 G++ +  KE +EEL+NLA KEL++FKG  V  I  F++
Sbjct: 263 LHG--AGRKEKGLKEVVEELRNLALKELEEFKGRKVEAISSFVN 300

[Close]

BLAST of CaUC09G168440 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-29
Identity = 83/268 (30.97%), Postives = 132/268 (49.25%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFS-APRNSAPALCIAACELVGGGRDQ 118
           +YW  +  +I   L   IP K P  +YE + + V +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 119 AIVAATALQLIHAATYTR-EYPPLTARAISRAAVVDR-VYGPNIQLLTGDGIAPMVFEIL 178
           A   A AL+++HAA+    + P +    + R    +  VYG  + +L GD + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168

Query: 179 AGSCDWSESGSERIRRVMVEMARAMGTEGWIGGQFRGLE-ETATAEEVSEKTEGGLHACG 238
                        I R++ E+AR +G+ G   GQ+  LE        V EK  G +  C 
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228

Query: 239 GACGVILGGGNEEEIEKMRKYGKLVGMVKGM-------SKNVFGGKENERKKEKIEELKN 298
             CG +LGG  E+E++ +R+YG+ VGM+  +        K  + G   +   E  EELK 
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288

Query: 299 LAFKELKDFK-----GENVHEIYGFLDF 311
            A KEL+ F      G+ +  +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316

[Close]

BLAST of CaUC09G168440 vs. TAIR 10
Match: AT3G14550.1 (geranylgeranyl pyrophosphate synthase 3 )

HSP 1 Score: 102.4 bits (254), Expect = 6.5e-22
Identity = 86/271 (31.73%), Postives = 128/271 (47.23%), Query Frame = 0


Query: 66  EDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATAL 125
           E +   L   +P ++P  V E + + + +  +   P LCIA CELVGG    A+ AA A+
Sbjct: 75  ESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAV 134

Query: 126 QLIHAATYTREYPPLTARAISRAA--VVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSE 185
           ++IH ++   +  P    A  R       +VYG ++ +L GD +  + FE +     +  
Sbjct: 135 EMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMT----FVS 194

Query: 186 SG---SERIRRVMVEMARAMGTEGWIGGQFRGL-EETATAEEVS---------EKTEGGL 245
           SG    ER+ R +VE+ARA+GT G + GQ   L  E    ++V           KT   L
Sbjct: 195 SGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALL 254

Query: 246 HACGGACGVILGGGNEEEIEKMRKYGKLVGMV------------------KGMSKNVFGG 297
            A     GVI+GGG EEEIEK+RKY + +G++                  K   K+V  G
Sbjct: 255 EA-AAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 314

[Close]

BLAST of CaUC09G168440 vs. TAIR 10
Match: AT3G32040.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 8.6e-22
Identity = 71/216 (32.87%), Postives = 110/216 (50.93%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQA 118
           SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 119 IVAATALQLIHAATYTREYPPLTARAISRAA--VVDRVYGPNIQLLTGDGIAPMVFEILA 178
           + AA A+++IH ++   +  P    A  R       +V+G ++ +L GD +  + FE + 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMT 187

Query: 179 GSCDWSESGSERIRRVMVEMARAMGTEGWIGGQF-----RGLEETATAEEVSE-----KT 238
                     ER+ R + E+A+A+GT+G + GQ      +GL       E  E     KT
Sbjct: 188 -VVSSGLVAPERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKT 247

Query: 239 EGGLHACGGACGVILGGGNEEEIEKMRKYGKLVGMV 263
              L A     G I+GGG EEEI+K+RKYG+ +G++
Sbjct: 248 AALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLL 281

[Close]

BLAST of CaUC09G168440 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-21
Identity = 66/216 (30.56%), Postives = 111/216 (51.39%), Query Frame = 0


Query: 59  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQA 118
           SY     E +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 119 IVAATALQLIHAATYTR-EYPPLTARAISRAAVVD-RVYGPNIQLLTGDGIAPMVFEILA 178
           + AA A+++IH  +    + P +    + R    + +V+G ++ +L GD +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 179 GSCDWSESGSERIRRVMVEMARAMGTEGWIGGQF-----RGLEETATAEEVSE-----KT 238
            +         R+ R + E+A+A+GTEG + GQ       GL+      E  E     KT
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 239 EGGLHACGGACGVILGGGNEEEIEKMRKYGKLVGMV 263
              L A     G I+GGG+++EIE++RK+ + +G++
Sbjct: 258 AALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLL 292

[Close]

BLAST of CaUC09G168440 vs. TAIR 10
Match: AT3G14510.1 (Polyprenyl synthetase family protein )

HSP 1 Score: 99.8 bits (247), Expect = 4.2e-21
Identity = 80/262 (30.53%), Postives = 124/262 (47.33%), Query Frame = 0


Query: 74  RVIPAKDPPAVYEPLGHFVFSAPRNSAPALCIAACELVGGGRDQAIVAATALQLIHAATY 133
           R +P ++P  V E + + + +  +   P LCIA CELVGG    A+ AA A+++IH ++ 
Sbjct: 7   RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66

Query: 134 TREYPPLTARAISRAA--VVDRVYGPNIQLLTGDGIAPMVFEILAGSCDWSESGSERIRR 193
             +  P    A  R       +V+G ++ +L GD +  + FE +          SER+ R
Sbjct: 67  IHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMT-VVSSGLVASERMIR 126

Query: 194 VMVEMARAMGTEGWIGGQFRGL-EETATAEEVS-EKTE-------GGLHACGGACGVILG 253
            +VE+ARA+GT+G + GQ   L  E     +V  E+ E         L       G I+G
Sbjct: 127 AVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMG 186

Query: 254 GGNEEEIEKMRKYGKLVGMV------------------KGMSKNVFGGKEN-------ER 300
           GG EEEIEK+RKY + +G++                  K   K+V  GK         ER
Sbjct: 187 GGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLER 246

The following BLAST results are available for this feature:

BLAST of CaUC09G168440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896497.1	7.0e-151	89.37	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
KAA0031902.1	2.3e-133	82.06	heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ...	[more]
XP_023536167.1	1.6e-131	81.73	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_004139865.1	3.6e-131	81.21	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
KAG6592047.1	2.9e-128	80.26	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of CaUC09G168440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39108	6.0e-28	30.97	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
Q94ID7	6.4e-22	31.92	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q9LHR4	1.2e-20	32.87	Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q9LUD9	1.6e-20	31.34	Geranylgeranyl pyrophosphate synthase 3, chloroplastic OS=Arabidopsis thaliana O...	[more]
P34802	2.7e-20	30.56	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]

BLAST of CaUC09G168440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLD5	1.1e-133	82.06	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel...	[more]
A0A0A0K8P9	1.7e-131	81.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1	[more]
A0A6J1IK44	2.9e-126	78.62	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A1S4DWU7	3.5e-108	76.87	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A2N9F8D7	1.8e-67	50.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1	[more]

BLAST of CaUC09G168440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38460.1	4.2e-29	30.97	geranylgeranyl reductase	[more]
AT3G14550.1	6.5e-22	31.73	geranylgeranyl pyrophosphate synthase 3	[more]
AT3G32040.1	8.6e-22	32.87	Terpenoid synthases superfamily protein	[more]
AT4G36810.1	1.9e-21	30.56	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G14510.1	4.2e-21	30.53	Polyprenyl synthetase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 53..311 e-value: 2.0E-43 score: 150.4
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 59..262
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 33..309
None	No IPR available	PANTHER	PTHR43281:SF6	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKE	coord: 33..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC09G168440.1	CaUC09G168440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004659	prenyltransferase activity