CaUC09G161870 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC09G161870
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionarabinogalactan peptide 23-like
LocationCiama_Chr09: 3937711 .. 3942175 (+)
RNA-Seq ExpressionCaUC09G161870
SyntenyCaUC09G161870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCGTTGTATTCGGAGCTTATTTATAGGGTGGGCCGGAAGGCGTGTGGACCCCACCGGGACTAGGCGTCCAATTGCGTGGTGAAAAGTCGCGTGAGACTTGTGGCCACGTGGAATACGAAAAAAATAAAAACTAATTAAATTATTTGTGTTCGCAGCAAATTGTGTTTTTTCTTTTTTCCTTTCTCAATTTCAATTTCAATACCGTTGAAAATTGAAGTTAACATATTTATTGAAGATTTTTTTTTTAATTTTTTTATTTTAAGTGATAAAAATAAAAAATAAAAAATAAAAAATAAATTTAAATTAGTAAATAAATGTTTTATGATTTTTTGAACAAGTTGACATGTCTATTATTTATATTAGTAACATTTCGTGATTATCTTTTATGTTTCGTGGATTTTTCTACGATATAATGGAGATTTCGATTCACCTCTAATGTCGATATCGAATCTATGGAAACAAAAAAAATATAGAGATGTTGACGGAAAATTAATACTATGATTCTAACATAATTTTAGAACTTAATTCAATGCTCTATACAGTCGCTAAAATTGACATTTTTTAGTAGTTTAATCTTTTTATTAATGTTACGAATAATATTTTAATCAATTAAATCGTGCTCAAATTGACATTTTGTGTTTAAAGATCATATATCATAGTTATAGTGTCAAATAAATGTCTAAAATTAAATTAACAACAACTTACAAAGACTTGTTAAACATTTTTTTAAAAAGAAGTTATAAATCTATTAGACACATAACAAAGTGTTTAGAAATATTATGGTTTAAAAAAACAAAAATTAGAGACATGTTCTAGACAACATTGAGATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTGTTGATATTACCTTAAGTGGTTGAATGTAATCTATAAAAGTTTGTTAGCTTAACTTGAGAGTCTTGCATATGGTTTGGATGTGAATTATGAAATGTTTTTTAGGTACTTGGTAAGGATTCGTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACAAAGATACAAATAGAGCATCCAACCCCAAATACGACACGAACTCTCCATTAACGATAGAGATAATACAATTATAAAATTTATCCTTCCACCTAAAAGAATCCTTAAGAGATGATGTGAAAGTTGCAATAGAGTAAGCAACTTTGTTCTCCTTTCTGAAAGAGAAACAAAAGTATTTAGCATTTGGTGGATACAACAAAAATATCTAATTCAGTAAGTTCAAACTACTTAAAAACTAAGCAAACCAATAAGGTCTACAATGTTAGACTCCACGCGATAAGAAAATTTGTTCTTAAAAGATGTTAAAATTGAAATTTAATTGATATGGTTAAAGCTAAATTACTTCATGTTTGTTTAAGAGTCTTGTATTAATTTTTAGCCTTTGTTATTAGTCAAGAATTACTTTGGAAATTAAATCCTCTATGCATCAATTTGAATTGTTCATTTGCTTAATATGACATCTAATGAAGTATACATATGTGTAAAAGTTAATGTAGGAACAATTTTCGAAGGCAAATTAATAAAGAGTCAAAATTAATTAATTTTATTTTTTTTCATAATAATAAAAGTTAGAATTTAAATAAATGCAATTATTAGTTGAAATTTTAAATTAATTGATTGAAACAATTATGAATATATATATATATATTTTTTTTTTTATAAAAAGTTTTAAAACCATAGGTCTGTTTGTGGGCTGTCGTCTGTTGAAAGGAAAAAAGAAAGGAGGAGCTTGGCGTTTGGGTTGAAGAAGGAAAGAAGAAAACGCGGGGTTTAATTCAAAGGCGGTGGGGGGTAAAACTGAGATTTCACATGTTGGGACTTGGGAGATTGAGGTTGAAGTTGAAGTTGAAGTTGAAGTTGTTCAACCAAAACACACGAAACGGGGAAGTGTGTTCTCATTTCTTGACTTCAAATTCTTATTATTTCTTGTGTGTGCCTTTCCTTTATTCTTATATTTTACTCCAAAAATTAAATATATATATATATATATATACATGTTTTAATTTAACCATTGTATTTTAAAATATTACAATTTTAGTCTTTATATTTTTTTATTTTATTTCAATTTGATTTTTAAAGGTTCACGGATCACGAATTATTTTGAGGAATCACGAACTCACTCCCACCAAAATTCTTCTACTCTTCTACCTTGCCCTGCTTCTATTTGATTAAATAATGTATGACAATAATAGTAAAAAGCATATATAATTTTAATGTATTTTAATACAAATATTTAAAAAATAGTCTTTTTTTTTTTTTTTTTTTTTTTACACAGAGACTTGATTTCCAAAGAGGAACGATGTGAAAAAATTACCCCACCCGTTATCATCCCTACCAATAGGTCATGAAATATTGTAATAACTTCGTTTTTTAAATGGTAGAATCCCTTTGACAAATAATAATAATACATTTTGTGTGGAATATATTATAAATTCTTCATTTTTTTAGGGATTTAAAATCAGTAATTATTGCTCTTACAAGTTACAATATATTTATATTTTAATAAACAACAATAAACCCCCAAAATTTTTCATTTAAGTTCGTTTTGTTATGTTCAATGATATAAGCTGGTAGGAGGATTCAAAGTTTAAGTCCATGATGATGGATGCAAACGAACATTTTCATTAAAAGCAAAAAAAAATTTACTCATAATATAAGACACAATCCAACAAGTTTGACATTAATAATATTGCATAAATTAACAACCATTTAAAGTACTCTTTCTTATTTCGAAAGTTCAAATACCCATATCTTAATTGTTACACCAAAAAATATTTGAATCTCCCCCTTCAAAATTGCAATCTAGTATTGAATTCCGTTACAAATTTAATATATAATTATCGATAGTGATTAATCGTTTACTAAATTATATAGAGGTGTTTAAAAGTATATTATACATATTATGCATTCTTCTGAAAAAGGAGATATTATACATAAAACAAAAAATAATTTAAAGTAGCATTAAAGTGGAAAAGTGAAAGAAAGGAAAAACCAAGTTGTAATTAGTAATATTTTGAATCAGCTCCACTAGCCACAAGATATTAACGGGAAAAAAGCCCCGACATAAGACTCGCTCAAACTAGTTATTTAATTTTTAACCAATTAAACAAAACAATACTTTTTTTTTTTTTTTTTTAAATGAAATTCCAAAATTAGTATCCTGATTTACCTATAAATAATCTCAATTAGCTTAATTGTTCCTCAGGCAGCAATCCAACAATCAGAGGCTTCTTCGGTTCGATCGCTCTCATCTCAATCGGAAGTGAGTTTTCTGCCGAAGAAAGCCAATTCAATCTCATTCGCCATGGAAATGAAGAACTTCGCTTGCGCCGCCCTCTTCGCCGCCGCCACCCTCAGCGCCGCCGTTGCTGCCGATGAGTCTCTCTCTCCTGCCGCTGCGCCGGGGCCGAGCAGCGCCGCCTCCGCCGCTCTCCCCGCCCTCGGATCCCTCCTCGGTGCCTCACTTGTTTCCTTCGTTGCCTACTTCTTGAACTGA

mRNA sequence

ATGAGAGCGTTGTATTCGGAGCTTATTTATAGGGCAGCAATCCAACAATCAGAGGCTTCTTCGGTTCGATCGCTCTCATCTCAATCGGAAGTGAGTTTTCTGCCGAAGAAAGCCAATTCAATCTCATTCGCCATGGAAATGAAGAACTTCGCTTGCGCCGCCCTCTTCGCCGCCGCCACCCTCAGCGCCGCCGTTGCTGCCGATGAGTCTCTCTCTCCTGCCGCTGCGCCGGGGCCGAGCAGCGCCGCCTCCGCCGCTCTCCCCGCCCTCGGATCCCTCCTCGGTGCCTCACTTGTTTCCTTCGTTGCCTACTTCTTGAACTGA

Coding sequence (CDS)

ATGAGAGCGTTGTATTCGGAGCTTATTTATAGGGCAGCAATCCAACAATCAGAGGCTTCTTCGGTTCGATCGCTCTCATCTCAATCGGAAGTGAGTTTTCTGCCGAAGAAAGCCAATTCAATCTCATTCGCCATGGAAATGAAGAACTTCGCTTGCGCCGCCCTCTTCGCCGCCGCCACCCTCAGCGCCGCCGTTGCTGCCGATGAGTCTCTCTCTCCTGCCGCTGCGCCGGGGCCGAGCAGCGCCGCCTCCGCCGCTCTCCCCGCCCTCGGATCCCTCCTCGGTGCCTCACTTGTTTCCTTCGTTGCCTACTTCTTGAACTGA

Protein sequence

MRALYSELIYRAAIQQSEASSVRSLSSQSEVSFLPKKANSISFAMEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAYFLN
Homology
[Close]
BLAST of CaUC09G161870 vs. NCBI nr
Match: XP_038899473.1 (arabinogalactan protein 23-like [Benincasa hispida])

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-15
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAA +S+AVAADESLSPAAAPGPSSAASAALPALGSL+GASLV+FVAY
Sbjct: 1   MEMKKIACAALFAAAAVSSAVAADESLSPAAAPGPSSAASAALPALGSLVGASLVTFVAY 60

Query: 105 FLN 108
           FLN
Sbjct: 61  FLN 63

[Close]
BLAST of CaUC09G161870 vs. NCBI nr
Match: XP_023528634.1 (arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 91.7 bits (226), Expect = 4.2e-15
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMKN ACAALFAAA ++A VA+DESLSPAAAPGPSSAASAALPALGSL+GASLVSFVAY
Sbjct: 1   MEMKNIACAALFAAAAVTAVVASDESLSPAAAPGPSSAASAALPALGSLIGASLVSFVAY 60

Query: 105 FLN 108
            LN
Sbjct: 61  VLN 63

[Close]
BLAST of CaUC09G161870 vs. NCBI nr
Match: XP_023004714.1 (arabinogalactan peptide 23-like [Cucurbita maxima])

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAAT++A VA+DESLSPAAAPGPSSAASAALPALGSL+GASLVSFVAY
Sbjct: 1   MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAY 60

Query: 105 FLN 108
           + N
Sbjct: 61  YFN 63

[Close]
BLAST of CaUC09G161870 vs. NCBI nr
Match: XP_022960230.1 (arabinogalactan peptide 23-like [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 9.5e-15
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAATL+A VA+DESLSPAAAPGPSSAASAALPALGSL+GASLVSFVA+
Sbjct: 1   MEMKKIACAALFAAATLTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAF 60

Query: 105 FLN 108
           + N
Sbjct: 61  YFN 63

[Close]
BLAST of CaUC09G161870 vs. NCBI nr
Match: KAG7025661.1 (Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAAT++A VA+DESLSPAAAPGPSSAASAALPALGSL+GASLVSFVA+
Sbjct: 1   MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAF 60

Query: 105 FLN 108
           + N
Sbjct: 61  YFN 63

[Close]
BLAST of CaUC09G161870 vs. ExPASy Swiss-Prot
Match: Q8S2W4 (Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 7.3e-10
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  AC  LFAAA+++A +AA+E  +P  APGP+SAASAALPALGSL+GASLVS  +Y
Sbjct: 1   MEMKKIACGVLFAAASMTAVMAAEEVGAP--APGPASAASAALPALGSLVGASLVSLFSY 60

Query: 105 FLN 108
           +L+
Sbjct: 61  YLH 61

[Close]
BLAST of CaUC09G161870 vs. ExPASy TrEMBL
Match: A0A6J1KX42 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111497929 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.5e-15
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAAT++A VA+DESLSPAAAPGPSSAASAALPALGSL+GASLVSFVAY
Sbjct: 1   MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAY 60

Query: 105 FLN 108
           + N
Sbjct: 61  YFN 63

[Close]
BLAST of CaUC09G161870 vs. ExPASy TrEMBL
Match: A0A6J1H8I1 (arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111461032 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.6e-15
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAATL+A VA+DESLSPAAAPGPSSAASAALPALGSL+GASLVSFVA+
Sbjct: 1   MEMKKIACAALFAAATLTAVVASDESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAF 60

Query: 105 FLN 108
           + N
Sbjct: 61  YFN 63

[Close]
BLAST of CaUC09G161870 vs. ExPASy TrEMBL
Match: A0A6J1F3F5 (arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111439670 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.1e-14
Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  ACAALFAAAT++A VA+DESLSPAAAPGPSSAASA LPALGSL+GASLVS VAY
Sbjct: 1   MEMKKIACAALFAAATVTAVVASDESLSPAAAPGPSSAASATLPALGSLVGASLVSLVAY 60

Query: 105 FLN 108
           + N
Sbjct: 61  YFN 63

[Close]
BLAST of CaUC09G161870 vs. ExPASy TrEMBL
Match: A0A6J1IYE9 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111479619 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMKN AC ALF AA ++A VA+DES SPAAAPGPSSAASAALPALGSL+GASLVSFVAY
Sbjct: 1   MEMKNIACTALFTAAAVTAVVASDESHSPAAAPGPSSAASAALPALGSLIGASLVSFVAY 60

Query: 105 FLN 108
            LN
Sbjct: 61  VLN 63

[Close]
BLAST of CaUC09G161870 vs. ExPASy TrEMBL
Match: A0A1S3CDX5 (arabinogalactan peptide 23-like OS=Cucumis melo OX=3656 GN=LOC103499912 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.2e-11
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFV-A 104
           MEMK  ACAALFAAA +SAAVAADES+SPAAAPGPSSAASAALP    +LGAS+VSFV A
Sbjct: 1   MEMKKIACAALFAAAAVSAAVAADESISPAAAPGPSSAASAALP----VLGASVVSFVAA 60

Query: 105 YFLN 108
           YFLN
Sbjct: 61  YFLN 60

[Close]
BLAST of CaUC09G161870 vs. TAIR 10
Match: AT3G57690.1 (arabinogalactan protein 23 )

HSP 1 Score: 64.7 bits (156), Expect = 5.2e-11
Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGPSSAASAALPALGSLLGASLVSFVAY 104
           MEMK  AC  LFAAA+++A +AA+E  +P  APGP+SAASAALPALGSL+GASLVS  +Y
Sbjct: 1   MEMKKIACGVLFAAASMTAVMAAEEVGAP--APGPASAASAALPALGSLVGASLVSLFSY 60

Query: 105 FLN 108
           +L+
Sbjct: 61  YLH 61

[Close]
BLAST of CaUC09G161870 vs. TAIR 10
Match: AT2G41905.1 (BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 5.4e-08
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 45  MEMKNFACAALFAAATLSAAVAADESLSPAAAPGP-SSAASAALPALGSLLGASLVSFVA 104
           MEMK  AC  +FAAA+++A +AA+     A APGP +S AS A+PALGSL+GASLVS  A
Sbjct: 1   MEMKKIACGVVFAAASMTAVMAAEVG---APAPGPAASGASVAVPALGSLVGASLVSLFA 60

Query: 105 YFLN 108
           Y+LN
Sbjct: 61  YYLN 61

The following BLAST results are available for this feature:
BLAST of CaUC09G161870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899473.11.5e-1588.89arabinogalactan protein 23-like [Benincasa hispida][more]
XP_023528634.14.2e-1587.30arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo][more]
XP_023004714.17.2e-1585.71arabinogalactan peptide 23-like [Cucurbita maxima][more]
XP_022960230.19.5e-1585.71arabinogalactan peptide 23-like [Cucurbita moschata][more]
KAG7025661.12.1e-1484.13Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CaUC09G161870 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S2W47.3e-1065.08Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2[more]
BLAST of CaUC09G161870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KX423.5e-1585.71arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111497929 PE=4... [more]
A0A6J1H8I14.6e-1585.71arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111461032 PE... [more]
A0A6J1F3F55.1e-1482.54arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111439670 PE... [more]
A0A6J1IYE91.1e-1382.54arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111479619 PE=4... [more]
A0A1S3CDX55.2e-1181.25arabinogalactan peptide 23-like OS=Cucumis melo OX=3656 GN=LOC103499912 PE=4 SV=... [more]
BLAST of CaUC09G161870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57690.15.2e-1165.08arabinogalactan protein 23 [more]
AT2G41905.15.4e-0859.38BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044702Arabinogalactan protein 23/40PANTHERPTHR34672POLLEN-SPECIFIC ARABINOGALACTA PROTEIN BAN102coord: 21..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC09G161870.1CaUC09G161870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane