CaUC08G144520 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGTAGCAGCAGGGATCGGCTACACCTTGATAGCGTTGGGCCCTTCTCTCTCCCTTTTCATCTCCGTTATTGCCCACAAACCCTTCTTGATTCTCACTCTCCTCTCCAGGTACTTCTCCATTTCTAACTTTATGCTTTTCTCTTCCTTCAATATCTGTCTTTTCTTCTATTCTCATCGCGGATGAATTCCAATTTCAATCACTCAACTTCATGCTTCTGTGTGCTTTGTTCTGGATTTTTCAAACTTCCAAATTAGGTTTCTGGACTTGCGAATTTTAATAATTTCCGGTTTATTTCAATTCTTTGGTTCCAGCTTCGGGTTGTATCGACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTCTTTTTTTTGTCCAATTCACATTCTATGTCCTCATCTAGTCAATTGTGTTGTTAAGCGGTGAGTATGTAGAATCCCAATTCGAAGTTTAGATTGAATTTGAAACTTTTTAAAGTTTGAACTATGTAGGCGCAAATATCAAATTTTAGGAATTAAATTTGTAATTGAACCTTTTTTAGATTCTATTTTGAAGTTGCTAACTGCTAAGCAGCTATTTTGTTTTACCGGATACTTTTCATGGTTATTATTGTTCATGTCTGCAGCACCCTGTTATGGCTCATTAGTTTGATATTGCTGTCTGCGTTATGGAGGGGCTTTCTTCCACTGAACTCAACAATATTGTGGCCTTATGCAATTCTTATATTGACTTCGGTCATTTTTCAAGAAGCTCTGCGGGTTCTTTTCTGGAAAGTCTACAGGTGAGTTAATAATAGCATCTCAATATCACTTGGAGAATCGAGTAATTAGGGGGAGCTGAAGCTTGAAGTACAAAGCAAAGCAAGTTCTTTCTCAAAGCACACCGTAGAAAAATAATAATGATAACAATGGTTTTATACATTGAAAATTGTGGTATTATGAGTGATTAGGTAAGAAACATTTTGGAAATGAGGGTTCTTCTAAAATATAGATTTTGTGCAACATTCCTTAGAAAAGTTTGATGGGATGCACCTCTTTGAATGTTGAGGTGAGTTGCCTCACCTCGCATAGTATAAACACTATTTAAAATCTGTTATAATAACTTGCTATAGACTATGGGAATTAAAAGCATGTAGGTTAGATTAGGTTTATTGAGGAAGTCTCAAAACATAAATGATTAGTTGTCGATGTATCAAGAGAAAGAGAGTACAAAGCAGTGAAGAAATTCCTTAAATGTTTATTATTTAGATAACTGTATTTGGGCTTTTCATGCATAAACTGCTGCTTAAACTTTACTTAACCAATAGCCAACTGATCACTGAACGCCTCAGCCTTCTTACCACTTAACAAACATAGTACACATGAAAATATATATCTAGACAGGGTTCAAGGTTTTTTTTCACGAAGCTATGAAGGAGTTAGCTTGTAGGTTTAATTAGATGATTCATATGTGATATATTTATATTCTTTTAGTGGAAAATTAGGCCAAAATTGGAAAAAGGGAGTTTTTGGACTTCCATAGATCAGTGATGCATTCAGTGATTAAATTTCTCCATCAGTTCAGTGTTTATGTTGAGCAGCCATTGTTGCACAATCTTTTACTTTTTCCCTTCTAAGATTAATCAGTACGGGTACAGTCCTTTTTATTCTTGGTTTTTATTTACATTTACTTTTGTCTACCACACAGAAATCAAAACACAATCATTTTCTCATTCATTCCAGATACTAAATTAGAACTGCCTAACTCTCTTATAATTGATAGATCTATTTGGCCTTGCTATTAGTATTAGTTTATCTTATTGGGGCATTATCCAAAGGGCATTTTTTTTAACCTTCCATGTCTGTAGATTACTAATTGGAGTCCTCTTACATGTACATCTTTCTGAAATATTTCAGCCTTCTAAGTTTTGGCTATTTTTCGTACCCTTCTAAAGACATACCTCCTTCCTGTCTGCTACTTTAAATTTGTCATTGATTTGTCTTTTATAATATACATGTACTATCACTTAGATTCTAAAGTAACTGTTTTCTGTAGACTGTATAATTCTTTAGCTATAAACAATGATTTACCTACGATGTCTCAGTTATTGAATTTTATAGGAGATTAGAAGATATGTTAGATGCTTTTGCTGACAGAGTTTCAAAGCCGCGTTTATATTTGACAGATAAGATGCAGATTGCTCTAGGTAAACTTTGATTTGATTACCCATGATTCAACTTATAGCCTTACGTTTTTTACCATTAGTTTCTATAAAGCCAAGATATTAAAATTTTGTTAGTACGTTCTACCCATATAAATAGTTGGGAAAAATACCCTTTTGGACCTTAGGGTTTGAGTATAGTTTTCACTTAGTCTCTAAGTTTCAAAATGTTATACTTTTATCCCTAAATTATGGGTTTAATTTCTATTTGGTGCCTAAATTTAAAAATGTTACATTTTGACCATTGACTTTTGTGTTTAGTTTTCATTTGGGCCCTAAGCGTCTATATTTTATACTTTTATTGTAGAGTTTTCGATAATGCTCACTTCTGCATTAACTTTAAGTTAATCAATTAAAAATAATTAGAAAATTTTAAATCAGTTTTAATAGTGACGGTAATTAGTGAAAACTAATTAATTTTTTATCACTTTAATTCTTTTAAATTAATTGATAGACATTTACACTATGAACCGAAAATGAGTATTTAGTGAAAAATCAAAGTTAAAAATGTAAATCTTGAAACATGAGGACCAAATGGAAACAAAACTCAAAACTCAAGGGTACAAATGTAACATTTTGAAGACCAAATAGAAAATTAAACTCAAAATTCAGGGATGAAAGTGTAGCATTTTGAAGCCTAGAGACCAAATGGAAATTAGACTCAAAACCTAGGGACTAAAAAGGTACTTTTCCCTAATAAGTAGAACCGTACAAAATGAGAACAATCATTAAGGTGTGGCTTTGAAGGGCTGGCCTATAAGAGAATGAACTTTTAAAATATGAAAGCTTAAATTTTCTGACCAGAATTCTAATTATGGAAACTTTAGATTTAGAAGACCCAGCACATTGAGGGGAAAAAAACCTTCCTAGAAGTTGCACCTGACTTAAGGATCTTATTGAGAGCAATACAAAACAAAAGTTGTCTGTGTTGGAGGTAATCAGACTAACTGAAGTCAGCTGTCCTAAATTTGAGACTTACTAAATGACGTTTTAATTTCTCTGCTCTAGTTTGAAAAGACTCTTTGTGAACTGAGGGCACAGTGATTTTTGCATTTCAGCAAGGTTCCCGGTCGACTTTGTTTTCTAATCTTACATGAGCTCTAATGTACACTTCTTAACTGGTTGCAGCTGGGGGTTTAGGTCATGGCATAGCTCATGCTGTGTTTTTCTGTCTTAGCCTTCTAACACCATCATTTGGTCCAGCGACTTACTTCGTTGATAGGTGCTCCCAACTACCTTTTTTTCTTGTCTCTGGTGAGTTCTTACTCATATTTGTGTAAGTACTTTGTATACCTCTGTGAACCATTATCCAAAAATTTAGGTCATTATTGTCACTCTAAATTTCATAAACCCTTGCATTAGATTCCAGCTATTCTAAGAGTTCATTTGTTCAAATACCATGTTTCTGATCGTTAATTGCTTGCACATTTTAAGGCTGGCAAATGGATCACTATTATTCTACTTTTTTTTACTGACGTTTATAACTGAAGGCAACTTATCTAGCATTATTTTGCTGGTATTCCTGCAGCTATCATTGCTCTTGCATTTGTTACCATCCATACGTTCTCTATGGTCATTGCATTCAATGGATATTCAGAGGGGAAGAAAGTGGACCAGTATTTTGTTCCAGTCATTCATCTTGCTGCAGGACTGGTGGTAAAACCCTAATCTTGCTCTGGATTGTTGATTATTTTTTTATTATTTTTGTCCCCCACGTCTAGTTTATTCATATGAAGAAAAGTAGCATTTTCACCTAAGTGCTCATCATGTAGATTTTATGATCAAGCCCTTTCTTCCTGGGTTTTTATTTTAAATTTAGGTTTGTTTAGTAGGAGAATATATTTCAAATGGAAAAACAACACAACCTTATGGCAGGCAAAGAGCCCCACCAACAAAAGCTACAAAATGTCAAAATGCATCGCTCAATTAACTTTATCAAGAATAAATGTGGTTACCAACAATTTGTGAAGGGCACTCCATTTTGAGGTCGATTACTTTGTTCAAAACCACAAATATATGGGTTCCTGTTCTTATTTATCAACATAAAAATGTCTAGTTTCTTTCAATCCTTAAGGAGAAGTCCAAGAGGGCCATACATCTTCACGAAACTCCATCTCTTTCATTTGGCCACCACCCTCCAAGAATGTCTCTTGAAAACAACGAACCAGCTAAAATTCTTCGGAAGAAAAGGCCATCCTTCATATAAGGGCTGTTATAGTATATATGTAATTATAGGAGCTTATTAGTCTTTTGTCCTTTATTGTAATTTACTAGTCTTGGTTTAGGGTTTCCATATATGCCTATATATTGTGACCTCTATCGTAGAATGAAGGTGAACTTCTCTCATATTCTAGTTTCACGTTTATATGGTATTAGAGCAATTATGGTTTTGGTCTTCTATTTGTTCCTAGGGCAATCTTGGGTTTTGTGAACCCTTAGGGTTTTAGGTGTAGAGCACCTTGTTGGAGGTTTGGTCTTCTATTTCGATTTGGTGCATCACCTTTTTGTCTGGACCATTGCTGCCACTGAAACCCATTGCTGCCTCCATCGCAGGAACCCGCTGCCTTCAAGGTTGTTATCGAAGTTTTTCCTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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CTTCTATGACATGCTATTGTCGTCGCCATATTCCATAGGTAACTTAGTCATCTCTGACTCGCTTTCATATCAAGCCCAGCAGCATCAACCTTGTCTCTGAAACAAATGCAGTTATCTATTTCTCTGTCAAATAAGTTCCTCTTCCTTCCTCGGTGTCCGATAGACCAATTTTCAATATTGAAATTGCAAAGTTCTTAGCAACACCATTTTTTGTTTTATGGGTCCGTTTAGATTGACTTAAGAAAAAAAGTGTTTTTCAAAAAACTCATTTTTATTAAAACTCTTTTGATAAAAACTCTTTAAAATACACTTCAAAAGCTATTTTGAATGGTTGCCAAACACTCTAATTTTTTCCAAAATGACTTATTTTTTAAATTGAACAATTGAAAATGTATTCCAAACACACCTATTTTATTTTTTACTCTTTTGTGATTAAGAAAATATTAGGGACTGGAAGGAAAAATAGGGATTGGAATCAAGCTCATTATCCTTTCTAATTTGATGATATTGAAAGTTTAGTGTCCAAATTGATACAACTGATAAGTTCGTCATGGGTGAAAATTAATTTGTTTTCCTTTTCTTTTCCATTTTTTAATATTCTAATTCATACTTTTCCTTTTGTTTCCAGACGCTGGTAAACTTTGCATCTGGAGGTTGTGTAATTGGTATACCTCTCCTATATATCATGGCAATTCTGACCTTGATTCACTGTGGGAAAATGGTTTGGAGAAGATTGATGGAAAACCGAAGTCGACAGGGTAATCGATAACATGTCATTGAACTGAACTACTCTTCTGCCGTAATATTGCTAACTCAGCATCTTGAAGGTATCTTCAAGAGAAGACCTATTATTCCCAGAGGAGTTATCTCCTTGTTTGTTCGTCCACCATTCCGAAAACGACGAACATGACTTTGTAGCCTAAGGAAATGCCATTTATGTTTCTTCTGAACGAGAATCCAGAATTAACATGATAACACATTTCTTAAAGTATTGATTACATTTCTGTATTATACTTATGGTTTCTTGAACGGTTGATTCAGAAATTTTGTGGTCAAGGCGAAGGGAGTTGGTGGCATAGTTCACTCAACAGGTAAATGA ATGACAGTAGCAGCAGGGATCGGCTACACCTTGATAGCGTTGGGCCCTTCTCTCTCCCTTTTCATCTCCGTTATTGCCCACAAACCCTTCTTGATTCTCACTCTCCTCTCCAGCACCCTGTTATGGCTCATTAGTTTGATATTGCTGTCTGCGTTATGGAGGGGCTTTCTTCCACTGAACTCAACAATATTGTGGCCTTATGCAATTCTTATATTGACTTCGGTCATTTTTCAAGAAGCTCTGCGGGTTCTTTTCTGGAAAGTCTACAGGAGATTAGAAGATATGTTAGATGCTTTTGCTGACAGAGTTTCAAAGCCGCGTTTATATTTGACAGATAAGATGCAGATTGCTCTAGCTGGGGGTTTAGGTCATGGCATAGCTCATGCTGTGTTTTTCTGTCTTAGCCTTCTAACACCATCATTTGGTCCAGCGACTTACTTCGTTGATAGGTGCTCCCAACTACCTTTTTTTCTTGTCTCTGCTATCATTGCTCTTGCATTTGTTACCATCCATACGTTCTCTATGGTCATTGCATTCAATGGATATTCAGAGGGGAAGAAAGTGGACCAGTATTTTGTTCCAGTCATTCATCTTGCTGCAGGACTGGTGAGCACCTTGTTGGAGGTTTGGTCTTCTATTTCGATTTGGTGCATCACCTTTTTGTCTGGACCATTGCTGCCACTGAAACCCATTGCTGCCTCCATCGCAGGAACCCGCTGCCTTCAAGACGCTGGTAAACTTTGCATCTGGAGGTTGTGTAATTGGTATACCTCTCCTATATATCATGGCAATTCTGACCTTGATTCACTGTGGGAAAATGGTTTGGAGAAGATTGATGGAAAACCGAAGTCGACAGGAAATTTTGTGGTCAAGGCGAAGGGAGTTGGTGGCATAGTTCACTCAACAGGTAAATGA ATGACAGTAGCAGCAGGGATCGGCTACACCTTGATAGCGTTGGGCCCTTCTCTCTCCCTTTTCATCTCCGTTATTGCCCACAAACCCTTCTTGATTCTCACTCTCCTCTCCAGCACCCTGTTATGGCTCATTAGTTTGATATTGCTGTCTGCGTTATGGAGGGGCTTTCTTCCACTGAACTCAACAATATTGTGGCCTTATGCAATTCTTATATTGACTTCGGTCATTTTTCAAGAAGCTCTGCGGGTTCTTTTCTGGAAAGTCTACAGGAGATTAGAAGATATGTTAGATGCTTTTGCTGACAGAGTTTCAAAGCCGCGTTTATATTTGACAGATAAGATGCAGATTGCTCTAGCTGGGGGTTTAGGTCATGGCATAGCTCATGCTGTGTTTTTCTGTCTTAGCCTTCTAACACCATCATTTGGTCCAGCGACTTACTTCGTTGATAGGTGCTCCCAACTACCTTTTTTTCTTGTCTCTGCTATCATTGCTCTTGCATTTGTTACCATCCATACGTTCTCTATGGTCATTGCATTCAATGGATATTCAGAGGGGAAGAAAGTGGACCAGTATTTTGTTCCAGTCATTCATCTTGCTGCAGGACTGGTGAGCACCTTGTTGGAGGTTTGGTCTTCTATTTCGATTTGGTGCATCACCTTTTTGTCTGGACCATTGCTGCCACTGAAACCCATTGCTGCCTCCATCGCAGGAACCCGCTGCCTTCAAGACGCTGGTAAACTTTGCATCTGGAGGTTGTGTAATTGGTATACCTCTCCTATATATCATGGCAATTCTGACCTTGATTCACTGTGGGAAAATGGTTTGGAGAAGATTGATGGAAAACCGAAGTCGACAGGAAATTTTGTGGTCAAGGCGAAGGGAGTTGGTGGCATAGTTCACTCAACAGGTAAATGA MTVAAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLNSTILWPYAILILTSVIFQEALRVLFWKVYRRLEDMLDAFADRVSKPRLYLTDKMQIALAGGLGHGIAHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFNGYSEGKKVDQYFVPVIHLAAGLVSTLLEVWSSISIWCITFLSGPLLPLKPIAASIAGTRCLQDAGKLCIWRLCNWYTSPIYHGNSDLDSLWENGLEKIDGKPKSTGNFVVKAKGVGGIVHSTGK Homology
BLAST of CaUC08G144520 vs. NCBI nr
Match: KAG6575355.1 (Gamma-secretase subunit APH1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 391.0 bits (1003), Expect = 9.6e-105 Identity = 225/307 (73.29%), Postives = 242/307 (78.83%), Query Frame = 0
BLAST of CaUC08G144520 vs. NCBI nr
Match: XP_023549211.1 (gamma-secretase subunit APH1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 386.0 bits (990), Expect = 3.1e-103 Identity = 213/254 (83.86%), Postives = 222/254 (87.40%), Query Frame = 0
BLAST of CaUC08G144520 vs. NCBI nr
Match: XP_038883993.1 (gamma-secretase subunit APH1-like [Benincasa hispida]) HSP 1 Score: 384.8 bits (987), Expect = 6.9e-103 Identity = 213/254 (83.86%), Postives = 221/254 (87.01%), Query Frame = 0
BLAST of CaUC08G144520 vs. NCBI nr
Match: KAG7013890.1 (Gamma-secretase subunit APH1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 383.3 bits (983), Expect = 2.0e-102 Identity = 212/254 (83.46%), Postives = 222/254 (87.40%), Query Frame = 0
BLAST of CaUC08G144520 vs. NCBI nr
Match: XP_022992373.1 (gamma-secretase subunit APH1-like [Cucurbita maxima]) HSP 1 Score: 382.9 bits (982), Expect = 2.6e-102 Identity = 212/254 (83.46%), Postives = 221/254 (87.01%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy Swiss-Prot
Match: Q8L9G7 (Gamma-secretase subunit APH1-like OS=Arabidopsis thaliana OX=3702 GN=At2g31440 PE=2 SV=2) HSP 1 Score: 323.2 bits (827), Expect = 3.2e-87 Identity = 158/204 (77.45%), Postives = 189/204 (92.65%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy Swiss-Prot
Match: Q9VQG2 (Gamma-secretase subunit Aph-1 OS=Drosophila melanogaster OX=7227 GN=aph-1 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-18 Identity = 76/230 (33.04%), Postives = 118/230 (51.30%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy Swiss-Prot
Match: Q8JHE9 (Gamma-secretase subunit Aph-1b OS=Danio rerio OX=7955 GN=aph1b PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-13 Identity = 75/262 (28.63%), Postives = 124/262 (47.33%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy TrEMBL
Match: A0A6J1JZ07 (gamma-secretase subunit APH1-like OS=Cucurbita maxima OX=3661 GN=LOC111488700 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 1.3e-102 Identity = 212/254 (83.46%), Postives = 221/254 (87.01%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy TrEMBL
Match: A0A6J1ENY0 (gamma-secretase subunit APH1-like OS=Cucurbita moschata OX=3662 GN=LOC111436365 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.7e-102 Identity = 210/254 (82.68%), Postives = 220/254 (86.61%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy TrEMBL
Match: A0A1S3BDD6 (gamma-secretase subunit APH1-like OS=Cucumis melo OX=3656 GN=LOC103488662 PE=3 SV=1) HSP 1 Score: 379.4 bits (973), Expect = 1.4e-101 Identity = 209/254 (82.28%), Postives = 219/254 (86.22%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy TrEMBL
Match: A0A5A7SV87 (Gamma-secretase subunit APH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2137G00020 PE=3 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 3.1e-101 Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of CaUC08G144520 vs. ExPASy TrEMBL
Match: A0A0A0KB01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041790 PE=3 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 9.1e-101 Identity = 208/254 (81.89%), Postives = 218/254 (85.83%), Query Frame = 0
BLAST of CaUC08G144520 vs. TAIR 10
Match: AT2G31440.1 (INVOLVED IN: positive regulation of catalytic activity, protein processing; LOCATED IN: integral to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aph-1 (InterPro:IPR009294); Has 268 Blast hits to 262 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 212; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 323.2 bits (827), Expect = 2.3e-88 Identity = 158/204 (77.45%), Postives = 189/204 (92.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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