CaUC08G142720 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC08G142720
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr08: 4380406 .. 4383963 (+)
RNA-Seq ExpressionCaUC08G142720
SyntenyCaUC08G142720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTATTTTACAACAAAACGGTTGTTTTTATAGATTTTGAAATCTCAAGACTCAAGATATGTGTGTGGGGGCAACGGAGGGGCCATAGAATTTATGCGAGAAATCTCTCTAATTATTACATCCAAAGCTTCTCTATCCTCCAAAATGGATTTATGAGAGACACCTCCAACTTCAATCGTTTCCAGCGTTTGATTCTTCTCGTTTGCCCATAATTTCTCAAGCGCTCGCAAGCTCACCATATTCACCGTCCCATCTCCATCTCCATATCCCTTTTCCGGCTGTTCATCAAACCCCTTTGCACCATACAACAGAGTCTCCGGCGTTCTCACACCTCCTCCAATTACACAAGTTAAATCCACACCAGGTGCTTGGAATTGTTCCATTAGAGGCAATATGCGAGATTCGTAAGGATAAACACCTTCCTCAAATCCAATATCCTTTAGAAAACGAGGGATTTCCTCCACTGTGTAATTGGAATTTTGAGTAATCACTATCGGCGTATTGCGTTCGTAGATTGTGGGGTTGGGCAATAGCCATAAGTTGCTTTCAGAACTTCGTTGCTCTGTTCTGACACGCAGTGGATTCACCAATGGGACGCCGAGGGTGTTTCCCGATGCGAATGTGCGCATTCCCTCCACTGATCCGCCCCATGGTGTAGACAAGGCCACAAGGTGTTTGATGAAATGCTTACGCCAAGAAGGTGAGTTTCTATTGAGAAATTGGAGGGCGAAGAGTCCCCCTAAGCTATGAGTCATGAGTATTACTGATTTTCCCCCATTTGAATTGCTTGCTTTCTCCACTAATTCTTTTAGATCTTTAAGGAATTTAGAACCCACTTCGCAGGGATGGCCTTCTGGGGCTAAACCATATCGAAAATCATAAGGTGCTCCGAACAAGGTCTTGTCTCTAACATACCCAATTGCTTCTAAAGAATCCACCAGCCGAGCCATATATGTTGTAATCTTCCTGCCAAAACAAAAAGGGCAACCAACCACAAGTAGCTGAATCTTTCAAAATACTCATACAAACCACCTTTCCCCACACAAATGGCAACATTAGAAGTTATGAAGCACATATACTTCATGTGAGGTACCTCACATAATAACTATTATGATATTATACTCCCAAATACTTCTTAGATACGTTTGTGAGACACGATTGGTATATATATTTAAATATTGGATATAGTTTCCTTAGAGAACTGAAAACCTATTTAAAAAGTCCGCTGCCCCAACTCAAAACTACAAAATTAAAAGGAAAAAAATAAAACAAACCCTAAAATCATGTAATCTTCATCTACAGGCTTGAGTCCTCACAAAGTCATGCAAAAAGTAACCCACTTGATTATCTTCCACAATTCAAGAAGGTCTTCGTTTATCTCCATACCTCTCCCTCTAATATTTACTTTCTATTTTGTTATGCTGCCTTTTGTATTGTATTTCGGTCTTTGTATTATATTTTGTTTTATCATCATTGACTTGACATTTTATGTTTTAGGTGGATTACATTTTACATAAAAACATAACGAATTCATATCCTAGTTTTTTAGAGATTCACATAAGGTTGTATCTATCATATCTGTATATGTGTTTGTGGTTCATAGATTAGAAGGAAGCTCACTTGAGATTAGGATCGAGGTAGAGAAGAGATTCGACTGATCCAAACTGCTTGACTCTTGTTTGAACGCCAACTTCATTTCTGTAATCATCCAAATCTCTGTCGTAACGAAGAGTCATTCTGTGAGCAAAGCAATCTGTGTATGGAGCCAACAGAACAGTGGGGCTGAACCAGAGCCTGAACCAACCTTGTGAATCCTTCTTGATTGGATTCCAACGGCTGCAAAATAAGGTGGAAGATTTGTAGTCTTTGGTGAGGCGAGCTTCCAATTGGTTCCCTCCAGCTCCAGGGATGAGGATGAGAGGATGGAGGGAGTTGCCTGATTCACACATACACAGCTGATGCACCATAGCCATTGAAACTATGGCGATGATCTTCAGGTTCAGGCCATCCTTCATCTTCTTCATCTTCTTTCCATGTCTGTAAATTGTCTTTGCATCTCCATCATAATTATCCTTGTTTCCTTGGCTTTCATCAACTCAATGACGTACCACTTCTCCATTTTGTGGTGCACAATAGTTTGCTTTCTCCTACCAAAGTTCAACAACAATCCAACAACAATCCCAATCGTTATGGGCCTTGGGCCAATATATTTTAAGGGGGACCAAATAGAAGGGTCATATTACACTTATTTCCAGAGGTTACTATTTTTTTTCATGAATGGGCTAACCGGCTGATATTTTACAGAAAAATTGGAGTGCAATGACCTTTTAGCCCTTGATTCCAATTTCGGCTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAATATAGATTTATGATCCTAGATTTCCCAAATACCCACAACTTTTCATCTTCAAATTCTCACTCAAAACTCTCTCTCATCTTTCCGGTGTGTGGCGACGGCGTGGGCAAAATGGGGGTGCTGGACAGTGATGAAGAGCTTCTGGCCGAAGCTGCAATGGCCGGAAAATGAGCAGATGAAATGGCGGGTGTTGGCTGTCGAGAGTGAAATACTCACTGGGCCACTTCTCATGACAGTACAAGTTGCATGTGACTAGCGACAGGAGATGGACGTCGGACAACGGCGCGAACAGATCCGACGCAAGGCAAATCGACTAATCCGACGCGAACAGATCTAGCATTGGGCAAACAGATCGACGCAGGGCAAAACGGCGACGAACATGAAGGTGGCTGA

mRNA sequence

ATGGTCGCTCGCAAGCTCACCATATTCACCGTCCCATCTCCATCTCCATATCCCTTTTCCGGCTGTTCATCAAACCCCTTTGCACCATACAACAGAGTCTCCGGCGTTCTCACACCTCCTCCAATTACACAAGTTAAATCCACACCAGAACTTCGTTGCTCTGTTCTGACACGCAGTGGATTCACCAATGGGACGCCGAGGGTGTTTCCCGATGCGAATGTGCGCATTCCCTCCACTGATCCGCCCCATGGTGTAGACAAGGCCACAAGGTGTTTGATGAAATGCTTACGCCAAGAAGGAGATGGACGTCGGACAACGGCGCGAACAGATCCGACGCAAGGCAAATCGACTAATCCGACGCGAACAGATCTAGCATTGGGCAAACAGATCGACGCAGGGCAAAACGGCGACGAACATGAAGGTGGCTGA

Coding sequence (CDS)

ATGGTCGCTCGCAAGCTCACCATATTCACCGTCCCATCTCCATCTCCATATCCCTTTTCCGGCTGTTCATCAAACCCCTTTGCACCATACAACAGAGTCTCCGGCGTTCTCACACCTCCTCCAATTACACAAGTTAAATCCACACCAGAACTTCGTTGCTCTGTTCTGACACGCAGTGGATTCACCAATGGGACGCCGAGGGTGTTTCCCGATGCGAATGTGCGCATTCCCTCCACTGATCCGCCCCATGGTGTAGACAAGGCCACAAGGTGTTTGATGAAATGCTTACGCCAAGAAGGAGATGGACGTCGGACAACGGCGCGAACAGATCCGACGCAAGGCAAATCGACTAATCCGACGCGAACAGATCTAGCATTGGGCAAACAGATCGACGCAGGGCAAAACGGCGACGAACATGAAGGTGGCTGA

Protein sequence

MVARKLTIFTVPSPSPYPFSGCSSNPFAPYNRVSGVLTPPPITQVKSTPELRCSVLTRSGFTNGTPRVFPDANVRIPSTDPPHGVDKATRCLMKCLRQEGDGRRTTARTDPTQGKSTNPTRTDLALGKQIDAGQNGDEHEGG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC08G142720.1CaUC08G142720.1mRNA