CaUC08G141400 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAACTTCCCAAAAATATATTCTCCTTGACTTGTTTGAGAAATTAGAAAAACCAAAAGCTTGAAGGGAATTCTCAATTGTTTTGGTTTGTGTTCGCAGTGCGGGGGTTTTCCAGATGAAGGACCCGTTGGAGAGAACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGGTTCCACCCTTTTTTCTCTTTTTCTTCTCTATTCACCACAAATTACTCTTCCCAACTGGGTTTTCAGTTTTGTCTTGTTATTATCTCGTTTTGTATTTTCAGAAATCTGGATGTTCAATAAGGCTTTTTGCGAACTGGGTATTTCTCGTATTGTGCGTTTGTGTGCTTTTATGCTCTTTCTTTTCCCCTACGTGGGTTATTGGGGGGTTGGTGTGATTGGAATGAATGCTGTAGGACACCCCTCCAATTTCATGCCCAATTGTTGTGTATGATTGTCATCTCCGGAAACTAAATCAAGCAATCCTTCTAGACTTTGTGTTTTTCTGCTTACAATCGCCTCGGTTGTATGCTTCCTGTTTTTTCTTTTCTCTTGGTTTCTATGGACTACAGTTCACAATATGAATACTGAAGGTTTCTTACTCATTCAGAGGTTTCTTCTGAAATAATTTTGCAGTCAGAAGGACCAGAGATACGCTCGAGCCTACATAGACTTTACCAAACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTAAAGCCGAAAGCTTTTTCCTTTTTCCTTTTATTGAACTTATCAGTAGCTTCTTGTTTCTTCTGGGTTTGGTGGGTGGTTCACTTGCTCTCAACCCGTTTCTGAGAAGTGGGAGATAACGATTTTATGAATGAGACCAATGCTTAATACAGATTACTCCCCTTCATGTTTTCTGATGTGCATTTTTCAATTAACTACATATCATCTTCGAGATTGTGAAAATGTTTAATGTTAGGATCATGTTTCGTTCCACATGTTTAGAGTCTCGATTGAAGTTAACTTATTCTAGTCAAATGATTATAGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCTCAACGTGTTCCCAGATCATCTACCAAAAAGGATGGCCGTGAGGGGACAATATACAAAGGTAATGATCAGTTTGTGAGAAGATGGAATAAGTGGTTGTTCTTGTTTTGTATTCCTTATTGTGTTGTGTAATTATCTTTCCTCAATGAAAGCAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGGAAAGAAGCAGAGCAATCTGGTTTGTTACTATGTTCACTGACTGGCTTCTTGACATTACTTGCATTCGTGAAGTCATTGGAAGAACGCCAAATATGTTTATGACTTAAAATTGAGTGCCAAAAAGTTGCTGAATAGTCATTCTATAAATTTGCTATTAACTGCCATAGAGATACCATTTACTCCAAATTTGGATAATTCTATAAGTTTTATGTCTCTACTTTTGTTTGCAGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGTGAGATTGTTGTATTCTCTTAATACATGTAACTGTGTGCTAATATTTTAAAAATTCTGAGAAAGTGAAGCTACTTGTTTACTAAGATGAGGTTGGAACCAGTTGATTTTTCATTATTTTGACTACTTCACAAGGTATTGGTTCTGTCCATGTAGAGATTAATATTAATGCATTTACTTTAGCATTAAGGTGACATTCCTTCGTTTGAATTTATCTGCTGCTTGTGTAATGTTTCAGTATCTTTTCCTTCCATATCGGTTAATTCCATGCATTATATGAATCCAGCTCGTAGGATGGTTTTCTATGTGGTCTTGAAGATTTTTATTCCTCTTACAATTTCGTACATACTAAATTTCTTGTTATCTCATGCTAAGTTTTTTGGTTCAATAGGGATCTTCAATACCTCGGAAGGTCAAAAGAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAGAAGGCATGTTACTTTCAATGTCTTTTTTTCTCACGTTTAGAAAATCCAAAGTCTTAGTTTGTTACTTGCTAGTGTCTTTACTATTTTCCCCCTATTGTTTTTGGGACAATAAGCTTTATTGGCTCGTCTTAGATTAGGTCTAAGGATGGTGAACGTGAAGCAGAATGTTTTTAACTTACAAAATGAAGAAAAATGCCTTAAGGATAATTACAAAAGTCCTTAATTACATATGCCTAAAGCGAGGCATTAAACTAGCCAGGGACCCAATCTCCTCCCATGACCTCCCAAAACCCTTAGGAGCCGTTTGGCCCACCAACTTTTTAAGTTAGTGTTAAACAACAATAGTAAAACACTATTGAAGTTTGCACATTTATTGAGAAACTCAATCTTACAACTCTATACCTCAAATACAAGCTTCCTAATTCCAGACTTGTTAACTCCACTCCGTTGGCCAAACACACCCTTAAAGATTCTCCCATTACTCTAGTCAAATATTCCATAAAAAAATCTAGTGAAATATTTTATAACGTTGATCATAGAAGACCACAATCTCTATTACAAACTAAACAAACTCTAAAGGCCTCAACAAAAGTTGGAAATCAAGGTATCCAACTGTCATCTCTTGAGGATGCGATCGAAATCCTCACATGCTCCCCTGATATGAATGCATCAGTACAGCCCGGGCACAAAGGAAGATTGCCTCTTGTATATAATCAGTAGTGTTAACTCCTAATGCAACTATGCAAGTACTTCCTCCTAGTCCTGCCACTCTAAAAACTTGACATTCTTGGAAGTTTTTTCCTTCATTGTGAGGTGAAGTTGAAAGTAATGAAGGCGATGGTGATGACTCTGAAGAAACCTTCCTAAAGTTTCCAACTTCTTAGTGGGGATAGTATGCGTTTGTCTAAGTTTTTATTGACTGTGGTATAAACTGTATCATATGAGACCGCCTCAAGATCATGAACCGTGAAATGTTGGAATTGAGGCTTTAGTTTTTTGCCCCCTAGATTTCATATGTACTTCTTGGCTATCCTTTTTTGTGAACAATTTGTATCTTCTATATTTTTTGTCTGAAGATTTTCTGTTATACATTCAGTATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTCCCCAGGCGAGAGGATCAGTCAGCTACTTCAAGTGGGATTGGAGTTTCGGATGTTGGTACAGGTATGTCTATTTATATGTCTATGTGGTCAGCAACATCATTTAAATTGTCATTTTGTTTTGTTCTAAGTTTTGATCTGGTATTTTATTTTTAGACTGTTGAGAATGAGTCTGATTTAAACTCTCTTAGCAATTCAGTGTTACTAGTCATTGAGGAGCAGGGGAACCTTAGCCGATTTGACTTGAGATCTGAACACTTTATGCCCTACTCTGCTGCCTACTTGCAATTTTTAAATAATTTTTTCCAATGCATGCTTTTCATGATGGGACTTAATTTTTTTCCTTTTTCTTTTTGGAAGAGTTCGCTTAAGTCTTATGTTTCTCCCATTTCAAATTATCCTGAGCCCTGTATTAACGTTTTTGAAAATTTTATTTTTCTCTTTATTAATAATTATCTTCTTGATTCTTTCTGGGAGTTTGCCATATTATGATGTGCAGATTGCAGGATTGTAATATTTGGACCTGCATTTTAACATATGCATTATTAACTTACCTTAAACACTTGGGAAGTGATATATTTGAGAGATGGGAGGGGGCACCTTTGCTCTGTTTTATCAAAATATGTTTATCAGGACAAGGAAAAATGAAAAAAAAAAAAGAAACAAGAACAAGGTCGTCCAGTAGATAGTGCATGTTGCCTGAATTTCTGAATTATGTTCTTTCGCTGCACTGGGCTTGCTACACACTTATTTCTTTTAATTTATCAATATGTTCTACATGTTTATAATGAACTTGCAGTCTAGAATTTGAAGGCTCTGTTTCATATGTATCTGTAACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAGGGGAAAGAGCGAGATATATCTCATGTAAGTTTCTTTTGTTCTCTCGACTAACTATGCAATTACGACTTTCGTTACCCTCTTTCTTTAGAATTATTAACTTCTGTGAATGATCTCCACTCCCACTCATGGCTAATTCTGGGAGGGCACAATTTCCTTTCTGTTGCATCGAATTTTAGCACTTGTAAATTTCATGGATAATGATACCTTTACAGGTTTCTGATGGCATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCAGAGGCGTGAGGCTGGTGGAAGCATGATCAGAAGCATCCTTTTAAATAATGAAGCACGCCATGGGCAGAGTTCATCAGTGGCTCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGACAATGGGAAGCGACCACCTCGTCCCATTAATGCTCGATCTGGGTCCAATGATATGTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGACAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAACGAATAAGAAACAAAGATAGACCTGATCGTGGGGTCTGGGCACCACGCAGTCGTTCAGATGCATCAGTCTCACAACTTGAGGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCTGACTCGGTTGAAGGTACTACTATTATAATCCTTGCTTCTATTTTAGGGACTACTTGCTTATTTGTACAATCTTATTATTGAAGTATCGGACCTTGATCATTGTGTTAAATCATCCTGCTTGATGGATGAGCTGAATAATTTATACTGCTACATTATGTTTCACAAATGAAATTGACCCTATGTATCTTTATGCACTTACAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGGCTGGGGATGTTACAACAACAATGAGTGGGCGTAACAGTTCAGTGGAGAATGGTTGTACTTTCTCACAAACTTTTCTTGCGTTGTCCACCTATTTTACGAAATTTTACAAGTACTTTCTACTCTTAGTTAATCTAAAACGTGTTGTGTTCTTTTTAGGTTCTGTAAGGCATGCTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCACGAGGTTCGTTTATGCATCCAAACTAGTGATTGTCTCTCTCGTGTTACATGATTGCTTTTTTTTTTTTTTTTCAAAAACTCATTTTCTTTGATGCCTGTGCAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTTCTTAGCATATTTAAATCATGTGAGTCCTTTTACAAATTATCAATGTTTTACCTCCTTTAAGATAAAAGAGCAATACTATCTTTTAAGAGGGTTTCGTCTCTTTCAACTGAATGACTAAGGAGGTCAAAATTATCTAACGATTCTCGTTGGAAGTAAATATAGCACATGTTAAAATCCATTGTGCTAACATTTGTCAATATATAATTTGGCATGTAACTCATGATAGTTTCGTTCCTCTTAGCACTCTTGGCATTCTTAGCAGTTGATAATTTGGCATGTAAATCAGCTTGTTTGTTGTTTATGGGAATGCCCTCGTGTATGTTTTAGTTGCTATGAAGTTGGCTATTTTATTATTTTTATTTAGAAAATAGGAAACAAAATATTTGATGGATGTGAATTTGTGACGGAATACTTATGAGAAAGAGGGAAACCCCAAGTTAATGAAAATTACATTAAGACATAACCAAAAGATATCATATACCAATTAAATGATGTGTGCATTTACATTAAGACATAACACGGACGGATACAGACAAGGTTAAAAGATTTATCAGAAGGGGCGAGCTTATTATTGTATGTCTGGCTATGAAGGTTATTACTTATCATTACTATCATATTATTTGGCTGAAAGATGTACTGCTCTACTGCTATAACATTCAGGCCGCATAAGCTATCATTGGGACTGTCATCATAGGGGTTCCAAAATGTGAACTGTAATGGAGTTAATAAATGACAGCTTCAATGAATTTCCTGACTGCTGCCATGCATTCTCCTTGAATTCAGCATATATTTTCTGCTGTAGTCGTACTTTTACTGGTTATTGGCTGGATATTGTTATTTGTTTGTCTTAGGTCTTTTCATTTATTATATAGATAAGGACATGTATTGTTTTCCATTAGATCATGACGATGTGTATGTTATCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGAATTATCTCCATTCTGAGGACTTAATGCACTTCCTCAGAAGGCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCATGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA CCCAAACTTCCCAAAAATATATTCTCCTTGACTTGTTTGAGAAATTAGAAAAACCAAAAGCTTGAAGGGAATTCTCAATTGTTTTGGTTTGTGTTCGCAGTGCGGGGGTTTTCCAGATGAAGGACCCGTTGGAGAGAACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGATACGCTCGAGCCTACATAGACTTTACCAAACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCTCAACGTGTTCCCAGATCATCTACCAAAAAGGATGGCCGTGAGGGGACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGGAAAGAAGCAGAGCAATCTGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAATACCTCGGAAGGTCAAAAGAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAGAAGGCATGTTACTTTCAATATTTTCTGTTATACATTCAGTATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTCCCCAGGCGAGAGGATCAGTCAGCTACTTCAAGTGGGATTGGAGTTTCGGATGTTGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAGGGGAAAGAGCGAGATATATCTCATGTTTCTGATGGCATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCAGAGGCGTGAGGCTGGTGGAAGCATGATCAGAAGCATCCTTTTAAATAATGAAGCACGCCATGGGCAGAGTTCATCAGTGGCTCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGACAATGGGAAGCGACCACCTCGTCCCATTAATGCTCGATCTGGGTCCAATGATATGTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGACAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAACGAATAAGAAACAAAGATAGACCTGATCGTGGGGTCTGGGCACCACGCAGTCGTTCAGATGCATCAGTCTCACAACTTGAGGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCTGACTCGGTTGAAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGGCTGGGGATGTTACAACAACAATGAGTGGGCGTAACAGTTCAGTGGAGAATGGTTGTTCTGTAAGGCATGCTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCACGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTCTTTTCATTTATTATATAGATAAGGACATGTATTGTTTTCCATTAGATCATGACGATGTGTATGTTATCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGAATTATCTCCATTCTGAGGACTTAATGCACTTCCTCAGAAGGCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCATGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA ATGAAGGACCCGTTGGAGAGAACCAAAGTAGTGATTAGGCACTTGCCCCCTTCTCTTCCTCACTCAGATCTCTTCCACCATATTCATGATCGATTCGCTGGTCGCTTCAATTGGTCTTACTATCGTCCCGGAAAGACCAGTCAGAAGGACCAGAGATACGCTCGAGCCTACATAGACTTTACCAAACCTGAAGATGTTTTTGAGTTTGCGGAGTTCTTTGATGGCCATGTTTTCGTTAATGAGAAGGGTGCTCAGTATAAGGCTGTAGTTGAATATGCACCTTCTCAACGTGTTCCCAGATCATCTACCAAAAAGGATGGCCGTGAGGGGACAATATACAAAGATCCAGATTATTTGGAGTTTCTCAAACTTATTGCAAAGCCTGCTGAGCATCTTCCAAGTGCTGAAATACAGTTGGAAAGGAAAGAAGCAGAGCAATCTGGTGCTGCAAAAGAAACTCCAATTGTTACCCCTCTCATGGAGTTTGTTCGCCAGAAACGAGCAGTTGAAAGCGGAACACAGGGATCTTCAATACCTCGGAAGGTCAAAAGAGGTGGGGCAGCATCCTCTAGAAAGCCTGAGTCGAATTCCATGAAGCGAGGGATGGAGAAGAAGAAGGCATGTTACTTTCAATATTTTCTGTTATACATTCAGTATATTTTAAAGGACAGTGTGAAGAACACAAACCGCAGAGACAAGTCAAATTTCATTTTGGTCCCCAGGCGAGAGGATCAGTCAGCTACTTCAAGTGGGATTGGAGTTTCGGATGTTGGTACAGCTGACTTTGGAAAGAAAAAAATTCTGCTTCTCAAGGGGAAAGAGCGAGATATATCTCATGTTTCTGATGGCATGTTACAGTTGCAGAGTGCTACATCTTCTGGGAATTCTCCTGCAAGTGCATCAAAACATAATCAGAGGCGTGAGGCTGGTGGAAGCATGATCAGAAGCATCCTTTTAAATAATGAAGCACGCCATGGGCAGAGTTCATCAGTGGCTCAGTCTCATCAAAAAATTCAGATCCTGAACTCAGACAATGGGAAGCGACCACCTCGTCCCATTAATGCTCGATCTGGGTCCAATGATATGTCCAGTAATGAACCAAATCCATCTGGTTCAGAAGGGGATGGAAAAAGGGCTCCAGACAGTAAGTTTAGTAAAAAGGAACTTCATGGCCTGGGTAGTGCTAGTGAGAAGCAAGAAAAACGAATAAGAAACAAAGATAGACCTGATCGTGGGGTCTGGGCACCACGCAGTCGTTCAGATGCATCAGTCTCACAACTTGAGGAATCCTCTGTTTCACAATCTAGTCATTTGCTTTCTGACTCGGTTGAAGCATACCGTGGGGAAATGAAAGAAGATATTCATGGAAGCAGGGCTGGGGATGTTACAACAACAATGAGTGGGCGTAACAGTTCAGTGGAGAATGGTTGTTCTGTAAGGCATGCTGGACGTCGTGGGGCTGGCCATGTTATGAAGGATGATGGGTCTTTGAACCCAAATGAAGGGAAGCCATCCAAAAGAGGTGTTGCTGGTGGTCACGAGAAACAAGTATGGGTTCAGAAGTCATCTTCAGGTCTTTTCATTTATTATATAGATAAGGACATGTATTGTTTTCCATTAGATCATGACGATGTGTATGTTATCCAACAGATAATGGCATCCAGACAGGACTATGGTTCCTCAAACTTCCAGGGGAATTATCTCCATTCTGAGGACTTAATGCACTTCCTCAGAAGGCATCATGTAAAATGGAGATATGCCCTGGAAGCAGTTGGTAACAGTAATAGGTTTCATGAACTGGATTGCAAGATTTGCAATTGTTTCGTCGTATACAGGTGGTTACAAAACACAAGGTTCTCTGGTTGA MKDPLERTKVVIRHLPPSLPHSDLFHHIHDRFAGRFNWSYYRPGKTSQKDQRYARAYIDFTKPEDVFEFAEFFDGHVFVNEKGAQYKAVVEYAPSQRVPRSSTKKDGREGTIYKDPDYLEFLKLIAKPAEHLPSAEIQLERKEAEQSGAAKETPIVTPLMEFVRQKRAVESGTQGSSIPRKVKRGGAASSRKPESNSMKRGMEKKKACYFQYFLLYIQYILKDSVKNTNRRDKSNFILVPRREDQSATSSGIGVSDVGTADFGKKKILLLKGKERDISHVSDGMLQLQSATSSGNSPASASKHNQRREAGGSMIRSILLNNEARHGQSSSVAQSHQKIQILNSDNGKRPPRPINARSGSNDMSSNEPNPSGSEGDGKRAPDSKFSKKELHGLGSASEKQEKRIRNKDRPDRGVWAPRSRSDASVSQLEESSVSQSSHLLSDSVEAYRGEMKEDIHGSRAGDVTTTMSGRNSSVENGCSVRHAGRRGAGHVMKDDGSLNPNEGKPSKRGVAGGHEKQVWVQKSSSGLFIYYIDKDMYCFPLDHDDVYVIQQIMASRQDYGSSNFQGNYLHSEDLMHFLRRHHVKWRYALEAVGNSNRFHELDCKICNCFVVYRWLQNTRFSG Homology
BLAST of CaUC08G141400 vs. NCBI nr
Match: KAA0039239.1 (regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 956.4 bits (2471), Expect = 1.2e-274 Identity = 506/576 (87.85%), Postives = 518/576 (89.93%), Query Frame = 0
BLAST of CaUC08G141400 vs. NCBI nr
Match: TYK00427.1 (regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 946.8 bits (2446), Expect = 9.3e-272 Identity = 503/575 (87.48%), Postives = 515/575 (89.57%), Query Frame = 0
BLAST of CaUC08G141400 vs. NCBI nr
Match: XP_008459659.1 (PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Cucumis melo]) HSP 1 Score: 940.3 bits (2429), Expect = 8.7e-270 Identity = 494/525 (94.10%), Postives = 502/525 (95.62%), Query Frame = 0
BLAST of CaUC08G141400 vs. NCBI nr
Match: XP_011656113.1 (regulator of nonsense transcripts UPF3 isoform X1 [Cucumis sativus]) HSP 1 Score: 937.2 bits (2421), Expect = 7.4e-269 Identity = 493/525 (93.90%), Postives = 501/525 (95.43%), Query Frame = 0
BLAST of CaUC08G141400 vs. NCBI nr
Match: XP_038890175.1 (regulator of nonsense transcripts UPF3 isoform X1 [Benincasa hispida] >XP_038890176.1 regulator of nonsense transcripts UPF3 isoform X1 [Benincasa hispida]) HSP 1 Score: 936.0 bits (2418), Expect = 1.6e-268 Identity = 491/525 (93.52%), Postives = 499/525 (95.05%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy Swiss-Prot
Match: Q9FVW4 (Regulator of nonsense transcripts UPF3 OS=Arabidopsis thaliana OX=3702 GN=UPF3 PE=1 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 7.5e-107 Identity = 250/543 (46.04%), Postives = 329/543 (60.59%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy Swiss-Prot
Match: B0S733 (Regulator of nonsense transcripts 3A OS=Danio rerio OX=7955 GN=upf3a PE=1 SV=2) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-19 Identity = 71/208 (34.13%), Postives = 109/208 (52.40%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy Swiss-Prot
Match: Q9BZI7 (Regulator of nonsense transcripts 3B OS=Homo sapiens OX=9606 GN=UPF3B PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.6e-16 Identity = 120/449 (26.73%), Postives = 188/449 (41.87%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy Swiss-Prot
Match: Q9H1J1 (Regulator of nonsense transcripts 3A OS=Homo sapiens OX=9606 GN=UPF3A PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-14 Identity = 61/205 (29.76%), Postives = 97/205 (47.32%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy Swiss-Prot
Match: Q10267 (Nonsense-mediated mRNA decay protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=upf3 PE=3 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.4e-12 Identity = 53/203 (26.11%), Postives = 93/203 (45.81%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy TrEMBL
Match: A0A5A7TD91 (Regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00280 PE=3 SV=1) HSP 1 Score: 956.4 bits (2471), Expect = 5.7e-275 Identity = 506/576 (87.85%), Postives = 518/576 (89.93%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy TrEMBL
Match: A0A5D3BML0 (Regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00280 PE=3 SV=1) HSP 1 Score: 946.8 bits (2446), Expect = 4.5e-272 Identity = 503/575 (87.48%), Postives = 515/575 (89.57%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy TrEMBL
Match: A0A1S3CB69 (regulator of nonsense transcripts UPF3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498712 PE=3 SV=1) HSP 1 Score: 940.3 bits (2429), Expect = 4.2e-270 Identity = 494/525 (94.10%), Postives = 502/525 (95.62%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy TrEMBL
Match: A0A0A0KSY5 (Smg4_UPF3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G650630 PE=3 SV=1) HSP 1 Score: 937.2 bits (2421), Expect = 3.6e-269 Identity = 493/525 (93.90%), Postives = 501/525 (95.43%), Query Frame = 0
BLAST of CaUC08G141400 vs. ExPASy TrEMBL
Match: A0A1S3CBX5 (regulator of nonsense transcripts UPF3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498712 PE=3 SV=1) HSP 1 Score: 923.3 bits (2385), Expect = 5.3e-265 Identity = 488/525 (92.95%), Postives = 496/525 (94.48%), Query Frame = 0
BLAST of CaUC08G141400 vs. TAIR 10
Match: AT1G33980.1 (Smg-4/UPF3 family protein ) HSP 1 Score: 389.4 bits (999), Expect = 5.3e-108 Identity = 250/543 (46.04%), Postives = 329/543 (60.59%), Query Frame = 0
BLAST of CaUC08G141400 vs. TAIR 10
Match: AT1G33980.2 (Smg-4/UPF3 family protein ) HSP 1 Score: 382.9 bits (982), Expect = 5.0e-106 Identity = 249/545 (45.69%), Postives = 328/545 (60.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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