CaUC07G139590 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGTAAGTAATATATTTAATTTACTTTGTTTGATACATCAATCAACTGATATACTTTATTTGTATAATTGATATATAAAGTTTATCATTTATATATAAAATTTATCAGTCAATTTGTGCTTATACATTTATTATTATTTGTGAACTTAATTTGAATCCTTATAATTTGTTTAGAGTATTGTTTTTCTACTACATCATCATCAACTTATAATGGTTCGATTTGTCCCATTGATAACCATTTAGAATAAATGTTGACAAATTATTGAGATACTAACGTAACACTTGAAATTGAATTTTGAACGAGCATTGATATATTACTAATGCATGTTTAAGAAATACTAAAGTTGCAACTATAAACTAAACTTGTTTGCTAACTTATTATTTGTTAAAGATCCATTGCTCATGTTTTTCTTAACAAAAGAGTTCTAAAAATCCGTTCTTTTTTTGTCGTTGAAATGTAAGATTAAAAATGGTTCCAATAAAAGAAAAACTTTAAATGCATAGACAAAAGAAGTGGCTCACAACTCAACTTGAATATTGAGAAATAAATATCACTTAATATTTCTGGCTATCACAACTCTGGTACAAACTAGAACCTGATCACCATATCTTATTGTTTCTACAGCTTATAACAAAGAGTAGATTGAGAAACAAAAAAAGTACATCCAAAATCCAAAAAACTCGTTAAGTTATTAAAGCTCGAACACCTATAGTTGCACGAAATTAAACGATCACGCTTTGCCATTGGGCAACTTAGCAGAAGCTCCAGCTGGGTTGAGGTCATCCCAAGCTTCAATCCAAGTCACCATGGCATCTGCCAGCTTGTCAAAGTAAGGGTCTACTTTGCTAAGCTTGTCCTTCACTTGCTTGGCCAGCTCAATGTAGCACTTTTGGACAGTGGTGCAATCTTTTGGAAGAACAACTTGTTGGAAGAATGGGATGATGTCTTCCTGCCAGAAAATCCCCTTGTACTCCTTCCTCAGGTTCACAAATGGGTTGCTTGCCTTGCTATGGTAGATGTAGGGCAGTCCTGTTTTCACTCCCAGCCCCAGATGGTCGCATATAACCTATTTACATCATCGATTTATTGTTCATACGTGTCTCATCGAAAATGAATTCATAATTAAGAATACGACATGAGGAGGACTTGTGTAAGCTAGATCTACATGTTTGTGATCAATCTATCATTTAGATGCACTGTAATTGTTCTAACAGAATGCTTTTCAGGGTTACGGATCGAAAAAGAATTTGGAATTAATGATATGATTCGGGGAGAGACACATATAACCTACATCTATATGTATATGATCAATCTATCATTCAGAGCTGTTTTGTTTTTCTTAGTTTATTAAAAGAAGCGGAAGGGCACACCTTGATGCACCAGCCTGCCCACATATCGTCGTATCGACCGATTGGTTGGCCGTCACCCATGAGTCCAAAGTACATTGCAGGGCCGATGAGATCTCGGTCAAATGCCAAATTCATACCACACATGGGAAACAAAGTGCCTTTTGGGATAGTCAAAACAGCATCCACAAACCTTTTTCAGACAATGAAGCTGATTAGACAACAAATTTGACTAAACCATCCAAGTAGAGTGGGGTTTAGAACATATTCTATACCTTGTGTTCCTTTCCAGAGGCTTAACAAGCTGAGTTGGTGCATCATAATCAGGGATATTAAGCCAGAGGCCATGAGAAACAGCGGTGGGGACACCCTCCCGCAGACTGAAGGGGTATCCACGCACAAAGTCGGCACCATCACGGTAAGGATCGTAAAGGGTGTTGAAGAAGAAGGGAGTGGAGGGGCAGAGGAGGTTCTTGATGTGCTGCCCAAGTGCATTGATGGGTTTCCCAGACGGATCACTTGCAACCTAAGCATAAAAATTTTGAAACAAATAAACCCCGGAAAAGAAGCAGTAATGAACAGATTATATTAAAAAAAAAAAAAAAAATGAAAAAAAGAAAAAAAGGAGGGGCGGAGGGGTGAGACATTTTGACAAACAGATGGCAGGCAGACATTGAAAAGGAAGCAAAGAGGGTAAAGAACTCACAAAGCAATCATCATCAATGGTGAAGATATACTTCTTTTTGGAGACCATATAGCCAAAGCATCGACAAGCAGAATCCTTAAAGGAAATGCAATTGGCTCTAGGGCCAAGAATGCGATTAATGTCATTGCGATTATAGAGCTCATAATCGAAACCCTCAGGGACTTTGATGGTCTTGGAAGGGTCACCATCTTGGACAATGATGAGATGGTAGGGCTGAAAAAAGGGCCTCCACATCTCGAGGAAGTCGAGATTTCTGATGGTGGGGATGACGATGTCGAGCTCATCTTTGAGCAGAGCGGTTGCAGAGGAGGCGGATTCAGCCATGGGAGAGAGGTTGGAATTGAGAAATGTGGAAGATGA ATGTATTTGCACGAAATTAAACGATCACGCTTTGCCATTGGGCAACTTAGCAGAAGCTCCAGCTGGGTTGAGGTCATCCCAAGCTTCAATCCAAGTCACCATGGCATCTGCCAGCTTGTCAAAGTAAGGGTCTACTTTGCTAAGCTTGTCCTTCACTTGCTTGGCCAGCTCAATGTAGCACTTTTGGACAGTGGTGCAATCTTTTGGAAGAACAACTTGTTGGAAGAATGGGATGATGTCTTCCTGCCAGAAAATCCCCTTGTACTCCTTCCTCAGGTTCACAAATGGGTTGCTTGCCTTGCTATGTTTATTAAAAGAAGCGGAAGGGCACACCTTGATGCACCAGCCTGCCCACATATCGTCGTATCGACCGATTGGTTGGCCGTCACCCATGAGTCCAAAGTACATTGCAGGGCCGATGAGATCTCGAGGCTTAACAAGCTGAGTTGGTGCATCATAATCAGGGATATTAAGCCAGAGGCCATGAGAAACAGCGGTGGGGACACCCTCCCGCAGACTGAAGGGGTATCCACGCACAAAGTCGGCACCATCACGGTAAGGATCGTAAAGGGTGTTGAAGAAGAAGGGAGTGGAGGGGCAGAGGAGGTTCTTGATGTGCTGCCCAAAACTCACAAAGCAATCATCATCAATGGTGAAGATATACTTCTTTTTGGAGACCATATAGCCAAAGCATCGACAAGCAGAATCCTTAAAGGAAATGCAATTGGCTCTAGGGCCAAGAATGCGATTAATGTCATTGCGATTATAGAGCTCATAATCGAAACCCTCAGGGACTTTGATGGTCTTGGAAGGGTCACCATCTTGGACAATGATGAGATGGTAGGGCTGAAAAAAGGGCCTCCACATCTCGAGGAAGTCGAGATTTCTGATGGTGGGGATGACGATGTCGAGCTCATCTTTGAGCAGAGCGGTTGCAGAGGAGGCGGATTCAGCCATGGGAGAGAGGTTGGAATTGAGAAATGTGGAAGATGA ATGTATTTGCACGAAATTAAACGATCACGCTTTGCCATTGGGCAACTTAGCAGAAGCTCCAGCTGGGTTGAGGTCATCCCAAGCTTCAATCCAAGTCACCATGGCATCTGCCAGCTTGTCAAAGTAAGGGTCTACTTTGCTAAGCTTGTCCTTCACTTGCTTGGCCAGCTCAATGTAGCACTTTTGGACAGTGGTGCAATCTTTTGGAAGAACAACTTGTTGGAAGAATGGGATGATGTCTTCCTGCCAGAAAATCCCCTTGTACTCCTTCCTCAGGTTCACAAATGGGTTGCTTGCCTTGCTATGTTTATTAAAAGAAGCGGAAGGGCACACCTTGATGCACCAGCCTGCCCACATATCGTCGTATCGACCGATTGGTTGGCCGTCACCCATGAGTCCAAAGTACATTGCAGGGCCGATGAGATCTCGAGGCTTAACAAGCTGAGTTGGTGCATCATAATCAGGGATATTAAGCCAGAGGCCATGAGAAACAGCGGTGGGGACACCCTCCCGCAGACTGAAGGGGTATCCACGCACAAAGTCGGCACCATCACGGTAAGGATCGTAAAGGGTGTTGAAGAAGAAGGGAGTGGAGGGGCAGAGGAGGTTCTTGATGTGCTGCCCAAAACTCACAAAGCAATCATCATCAATGGTGAAGATATACTTCTTTTTGGAGACCATATAGCCAAAGCATCGACAAGCAGAATCCTTAAAGGAAATGCAATTGGCTCTAGGGCCAAGAATGCGATTAATGTCATTGCGATTATAGAGCTCATAATCGAAACCCTCAGGGACTTTGATGGTCTTGGAAGGGTCACCATCTTGGACAATGATGAGATGGTAGGGCTGAAAAAAGGGCCTCCACATCTCGAGGAAGTCGAGATTTCTGATGGTGGGGATGACGATGTCGAGCTCATCTTTGAGCAGAGCGGTTGCAGAGGAGGCGGATTCAGCCATGGGAGAGAGGTTGGAATTGAGAAATGTGGAAGATGA MYLHEIKRSRFAIGQLSRSSSWVEVIPSFNPSHHGICQLVKVRVYFAKLVLHLLGQLNVALLDSGAIFWKNNLLEEWDDVFLPENPLVLLPQVHKWVACLAMFIKRSGRAHLDAPACPHIVVSTDWLAVTHESKVHCRADEISRLNKLSWCIIIRDIKPEAMRNSGGDTLPQTEGVSTHKVGTITVRIVKGVEEEGSGGAEEVLDVLPKTHKAIIINGEDILLFGDHIAKASTSRILKGNAIGSRAKNAINVIAIIELIIETLRDFDGLGRVTILDNDEMVGLKKGPPHLEEVEISDGGDDDVELIFEQSGCRGGGFSHGREVGIEKCGR Homology
BLAST of CaUC07G139590 vs. NCBI nr
Match: KVI09064.1 (hypothetical protein Ccrd_012560 [Cynara cardunculus var. scolymus]) HSP 1 Score: 177.6 bits (449), Expect = 1.8e-40 Identity = 86/184 (46.74%), Postives = 131/184 (71.20%), Query Frame = 0
BLAST of CaUC07G139590 vs. NCBI nr
Match: KVH99295.1 (hypothetical protein Ccrd_022478 [Cynara cardunculus var. scolymus]) HSP 1 Score: 173.3 bits (438), Expect = 3.4e-39 Identity = 90/168 (53.57%), Postives = 127/168 (75.60%), Query Frame = 0
BLAST of CaUC07G139590 vs. NCBI nr
Match: ACU18685.1 (unknown, partial [Glycine max]) HSP 1 Score: 162.2 bits (409), Expect = 7.9e-36 Identity = 79/177 (44.63%), Postives = 127/177 (71.75%), Query Frame = 0
BLAST of CaUC07G139590 vs. NCBI nr
Match: GER45285.1 (UvrABC system protein B [Striga asiatica]) HSP 1 Score: 119.8 bits (299), Expect = 4.5e-23 Identity = 53/102 (51.96%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of CaUC07G139590 vs. NCBI nr
Match: GER50472.1 (zinc finger nuclease 2 [Striga asiatica]) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-15 Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of CaUC07G139590 vs. ExPASy TrEMBL
Match: A0A103YH89 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_012560 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 8.8e-41 Identity = 86/184 (46.74%), Postives = 131/184 (71.20%), Query Frame = 0
BLAST of CaUC07G139590 vs. ExPASy TrEMBL
Match: A0A124SE87 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_022478 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.7e-39 Identity = 90/168 (53.57%), Postives = 127/168 (75.60%), Query Frame = 0
BLAST of CaUC07G139590 vs. ExPASy TrEMBL
Match: C6TA33 (Uncharacterized protein (Fragment) OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 3.8e-36 Identity = 79/177 (44.63%), Postives = 127/177 (71.75%), Query Frame = 0
BLAST of CaUC07G139590 vs. ExPASy TrEMBL
Match: A0A5A7QIY2 (UvrABC system protein B OS=Striga asiatica OX=4170 GN=STAS_22211 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.2e-23 Identity = 53/102 (51.96%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of CaUC07G139590 vs. ExPASy TrEMBL
Match: A0A0V0IHD7 (Putative ovule protein OS=Solanum chacoense OX=4108 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.0e-17 Identity = 65/163 (39.88%), Postives = 91/163 (55.83%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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