CaUC07G138490 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTTCGAGGGCCTCTTTTGGATTTTTGGCTGCCACCGCTCTCCTCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCATTCCTTGGCTCCGGCACCCGCTCCCACCAGCGATGGTTAGTTCCCCTCCTAATTTCTCTTTCTTTAACTTCTGTTTGCATTTCTGTTCCAGATCTGTGTGGAATGTGGATCTCTGGCTTCAGATGATTTCTGTTTCTTTACGCTTCCTTTCCTGATTCTTTTTTTCGATTTACGTTTCTAAATTGAATTTAGCTCAAATCTTAATTTAGTTCATTCCCACCCCCCAGTTTTGAGTATTCGTTCAGGCTTTTCGTGGATCTATTTTCCAATATGCATTCTCAATCTTACGACAGGTCATTTACATCGATTTGTGGACCAATGGTTAGAAATGTCAAATATATAGACGCTATTTTCTTCTTCTCATAACAACAGCATAAAGTTATTTCATAGTTTCAATAACTATTAAATGTCCCATTTGTGAGTGTAATCAAACCAATTGTCATTGTTATGCAAGTAATTATATTTGCTATTTGTGTTTCATCATGAAGTCCTATTCTCAAAAGCCCATTTTAAACTTAATTTAAATAGTTGTTATTTGAAATGCAAAATCCTAAGGAGAATTAGGGATGGAATTCTTAGATTTCTCAATGAAACTTAATTGGTATCTTTAAAATGGAATTTGACAGGGACATCCATAGACCAAGGGATAGCGTATGTGTTAATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAA ATGGCGGTTTCGAGGGCCTCTTTTGGATTTTTGGCTGCCACCGCTCTCCTCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCATTCCTTGGCTCCGGCACCCGCTCCCACCAGCGATGGGACATCCATAGACCAAGGGATAGCGTATGTGTTAATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAA ATGGCGGTTTCGAGGGCCTCTTTTGGATTTTTGGCTGCCACCGCTCTCCTCTTTGCCATCTTCTTGCCGGTTGCTCAGCCTCATTCCTTGGCTCCGGCACCCGCTCCCACCAGCGATGGGACATCCATAGACCAAGGGATAGCGTATGTGTTAATGATGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAA MAVSRASFGFLAATALLFAIFLPVAQPHSLAPAPAPTSDGTSIDQGIAYVLMMVALALTYLIHNADLSNSF Homology
BLAST of CaUC07G138490 vs. NCBI nr
Match: XP_038882280.1 (arabinogalactan protein 22-like [Benincasa hispida]) HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26 Identity = 67/71 (94.37%), Postives = 69/71 (97.18%), Query Frame = 0
BLAST of CaUC07G138490 vs. NCBI nr
Match: XP_022931316.1 (arabinogalactan peptide 22-like [Cucurbita moschata]) HSP 1 Score: 125.2 bits (313), Expect = 2.3e-25 Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. NCBI nr
Match: KAG6577157.1 (Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015155.1 Arabinogalactan peptide 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25 Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. NCBI nr
Match: XP_022136454.1 (arabinogalactan peptide 22-like [Momordica charantia]) HSP 1 Score: 124.4 bits (311), Expect = 3.9e-25 Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. NCBI nr
Match: XP_022985432.1 (arabinogalactan peptide 20 [Cucurbita maxima]) HSP 1 Score: 123.2 bits (308), Expect = 8.7e-25 Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-14 Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-14 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-14 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 4.2e-14 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy TrEMBL
Match: A0A6J1ETC6 (arabinogalactan peptide 22-like OS=Cucurbita moschata OX=3662 GN=LOC111437536 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25 Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy TrEMBL
Match: A0A6J1C4C2 (arabinogalactan peptide 22-like OS=Momordica charantia OX=3673 GN=LOC111008162 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25 Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy TrEMBL
Match: A0A6J1J4V7 (arabinogalactan peptide 20 OS=Cucurbita maxima OX=3661 GN=LOC111483439 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.2e-25 Identity = 64/71 (90.14%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy TrEMBL
Match: A0A0A0KZS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051380 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.7e-24 Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = 0
BLAST of CaUC07G138490 vs. ExPASy TrEMBL
Match: A0A5D3CYF3 (Arabinogalactan peptide 22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004150 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.8e-23 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CaUC07G138490 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 ) HSP 1 Score: 80.1 bits (196), Expect = 7.9e-16 Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of CaUC07G138490 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 ) HSP 1 Score: 80.1 bits (196), Expect = 7.9e-16 Identity = 42/63 (66.67%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of CaUC07G138490 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 ) HSP 1 Score: 78.6 bits (192), Expect = 2.3e-15 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0
BLAST of CaUC07G138490 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 ) HSP 1 Score: 78.2 bits (191), Expect = 3.0e-15 Identity = 42/63 (66.67%), Postives = 47/63 (74.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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