CaUC07G134390 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC07G134390
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	protein Iojap, chloroplastic
Location	Ciama_Chr07: 24417088 .. 24423041 (-)
RNA-Seq Expression	CaUC07G134390
Synteny	CaUC07G134390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACAATTAGATTTGACAAATCGACATTGCTTCATCGTTTAAAAATATCTTCCCTCACGGCAAAAGGAACAAGCATGGCGTTATCCACTACCTTATCTCTTCACGGCGCCGGCGCCGGAACCTTGTTCGGCGGCGAGCTCCGGCCATTGGGTCACGATTATTTCAGAGTTTCCAAAAAACCCAGAAAACAAATTTTCTGCTCATGCTGGAATGGGTCCCCATTTCCATACCAAAACTGCATTTGGAGGATACCCTCTGCCAATAACTTCCATTTGAAGTCAATGGAGACTTCGCCATTGTTCGCCATCGGAGGAGAAGCTGAAGATGCCTTTTTATCGGTATTTTGTTTTCATTTCGAACCTATTTTGAATCATGTTTCGTTGATGTATTTGGAAGAGATTTTGATTCTTGTTGCCAATTGATGTGTGGTTGCTGGGTTTTCGTTGAGGGATAACTTGATTGATCTAAATCTTACCTTTTTTGTTGTTCAAAATGGATGTTATTTCCTGAAAGAAAAGAGGTCTCTCTCTTACCTTTCCCTCTTATTTTTGGAGCTGAAGCTAATCGGGATTCTGGGAAGAACCTTATCTACTTGAAAGTTATTTACAAAAAGTAAAAGAAGCTCATCTCTCTCTCTCTATTTCCCCTTTCCCTCTGATTTTTGAATGCTGCAGCTATTTGGGCATTGAGAAGAACCTTATCAAAATAAAGAAAGTTATTTGCCAAAAGAACAGAAGCCACCCTCAAGTAATTTGCAAAAAGAAAAGAAGCCTCTCTCTTCACCCCCCCCCCCCTCCCTGTTTTGGGATATCATATAATAGCTCATTACTCAGAAATGATATGAGGGGAAGTAAAGCAAGCAGCAATCTCATAAAGATTTCTTTCTTTAGTTTGATGATTGTCTTCTTATAATCTTCATGCACTGAACTGACTCTAGAAAAGTCCTGTAAAACATTATTTCTTGTATTCAGAATCTAATCATCAGTTCATAGAATAAAAAGTTCATGATATTTACTTCTAAGTTCTAATAATGCATAGAGAGACAGTGGAAAAAGAAGAGAATCTTTGTAAAAACCAAAAACTTTGAACTTGCCGCTCAGATTTGTATACTATTGGCAATATTTTTATCAAGAGAGAGAATAAAGAAAGAAAGAAAGAAACAGTGCTTACTGCCATGGAAGATCTCCTGCAAGCAGCCAATCTCCTTCTTTGTCCTGATAGGTGAGAGTTAAGCTGGCATTACTATTCCCACACTTCTGATCTGTTCATAAGAAAACATCAAGTTTCAAATTTAATTACCACTAAATATTAAAAAATAGGTAATTTTGAGTTTTCAAAACATGTTGAGTTGGACATTTAGAACTGTGACCTCTTAGTCAATGATATATGCCTAAACCAATTAAAGTATGCTTAATATGGCTAAAAAAAACTGGATAATTATGGCTCTCTTTCCTTTTTTCTCCCTCGTGTTGTCTCATGATTTCGACTTTCTGTTTTAAATCTATATCTATCTAAGTTATCATTGGTTGGTATTTCACTCTTTAGGAACATTTTTGAATTCTTAGGCAAACTTTAAAAGCAAAAACAGGATTTCTCAAAGACTAAAATTTGGCTAAGATATCACGAAAACAAACAGTTTTGAAATTAGAATGGAGAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCGAGGAGCTTCATCAAATTGAACGTTTCAAAAGAGAAAAGATGCCTCTCTCTCTTCTCTTCAAGGATTGAATACAGGGATTTAGCCGATTAGTCATATCCTTTGTGTTTCTTTACTTGGTTCTAAATGGTGAACCCCATTTACCTTTTGTTGAAAAGAAACAGGAAACTGAAGTTCGAAGAGGCTGAATCCAAGCCACTCATTTGAATTGTTTTGGACCTTGTATCTTCGTTTACTTGCTGATCTTCACAGGAAAATCAAGTCATCATTATGTTTTTATTGTCAGACTCAAACTTAATTTGGTGTAAAGGAAAACAAATACTCATCAAACTGATCTGTACTAACTCTGGATATCAATTTATTTTAAATGATTGCCATAGGGTAGAGATATTGATGCATTCTATTGTACATATAAAATGTCTGATACGATTGTTGTCGTTGCAAATTACTGCATCTACTTGTGATATTGATCGACCCAGTCAATGATTTCTGGCAGAATATGAATGACGACACTGATGACATGTACGATGATTTGTTCAAGAAGTATGGGAATGTGGTATTCAAGAGCAATGATCAAAAGCTTCCTAGTGCAGAAATTGACGACGATGCAGAAAGCCTTTCATGTAAGTTTCTCTGAATTAGCAGGATCAAGAAACAAACATAATTTTGCTGTGGATAAATGGTTGTTAGGTACGTAGTACCTTGGAGAATAACACTCCAAAAGCTAGCTATTGAGGTGAGAAAGCCAAGCCACTTAAGTACCACATTGTTCATAACATTTTGACCGATGTGGGACAATCTTTGTTCCTAACAATACCCCATCCCTGGAAAGTTGACGTCCCGATGGCTACTCTGACAGTACTTCACTTGGCCACACCTAGTCAGAACTTTCGGCCGATTCCACTTTGGAACGTCAACAATCGGCTTTGATACCATTGTTAGGTACTTAAAGCACTTTTGAGAACAACACCCCAAAAGCTAGCTATTGAGGTGAGAGAGCCAAGCCACTTGAGTACCACATTGGTCATCCCATTCTAACTGATGTGGGACAAAGACAGCCCACACTACCTTGGTTCCTAACAATGGTTTGCTTCATCTACGAGGATAGCGGATAATGTTTGCTAATTTATTTTAACTTGGTATGGTTTCTTGTAGTGTGATTGTGAGGTAGTTCGATGAAAGGAAGGGAACAATCTTATCATTCTTTGGTTGAATCAATAACAGAAATGGAAAGTGGGATGGTTACATACAAATTACATGTCTATCCAAAAGCAAGTGTAGGTCCTCGATTCCACCCGGGCTGTCCTTTCAATTGGAAGTGGAGAGAATTTATATTTATCCTGAAGGATTAAATAAACCTTTTGGATGTGTATCATAGACAACAAAAGAGCCAAAGAAAACAGCCTAAGGGCAGGGGAAGATGAGACCCCCTCCTGTAGAAACTAAAAAAAGAGCTTTCCAGTTGTTTTGAATCATGTACGAAAACTATAGTTACAAAAGAATTTTATGTCTCACACACCAGCATGACACACTAAGCTGTACGTTACTACAAAAACCTCAAAGAGGGATATTTGTCTTAAGAAAATTTCACCCAAAGACTCCACACAATAGCCATCACAGCCATGGCCCACAGCATCCTTTTCCTTTGCTTAAACCACCCACCCTGCAGCACTGCAATCAGCCAGGCCTCAACACTTTGTGGAAGACAAAGGGAAATATTGAATTCTCTTTCTACCCAACTCCATACCCTCTGAGCAATCAAAGGTAGAAAGCAATAGGTATCTCAAGTTTTCATTAGGCAGAAAGCAAAAATTCACAAGCTTATAAGCCTATGGATGAACGATTAGTAAATTATGCACACACATTTTGTAGTCACGTATATTATGAATTCAAAACTTTAGTTACATGGAATGGTTGGTGAACTAATATTCCATGCTTATCCCTGCAGTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTTTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACGGCATTTTCTCGTCCTCAGATTGATGCTATAGGGTACTGCTACCTCTTTGGTTTGTTGTCCTCTTTATTGCTTGCAATAAGGAAAATTGGACCTGTGTTCAATTGGATTTTGGTATTACTTAAACCTGTGTTCAATTGTATTTTGGAATGCAGATCCCGGATAAGAGACCTTGCTGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGACGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGTATGCACTATTTGCATTTCAATTTGTTTATCTAAGATATACAAGTGTTTCGATAGAGAAGATGGAAGCACAAGGGGACAGGGAACCAATCAGAAAGAAACAACTTATGGTAAACTAATAGCTATACGAGAACACGTAGTATACCTCTCTGTCTCTTAACGAAAATCAAACTATTAAGACAGTGAGAAAATACAAAACGATACCGTGCAAAGAAAACAGAGATAGAGAGATAAAATGAAAGGAAAAAAAAATTTGTTCCTGTTGATGGGAATATAAGACAAAAGGATACCTACAAAAGTCCAAGTAAACTGACTTCCAAAAGAGGTGTATCCCAATTGTCAATAATAAAACTTTAAAATTTAGCCTTGTTGTCTATTAAAAGGTGCAACTTTGGTGTTACGGACTCGGGATGTTTGGATATATCCTTTTAGGTGCTAGTTCAAGCTCTTTGGTGGATGTTTCTCAAAGCAGCTAAATTTTCCTGAGATTTAGTAGTAGGGATGGATCATGAACATAATGCAAGTAGTGAGGCCATTCAATTCGATGGTGTCCCATTTATATGAAAAAAGATCTGTTATCATACAGGATGTCCATAGCGAAGATCTGAAGTGTATTATATTCTAAACTCATGAACTACCGATGTTTCAATCTTTAAAAACATTCAGATTAAGTCTACCAAAATGTCCAATTGTGATTTTCCACTTATCAGAGTTCATAATTTACTATAGAGCGGATGGCTTCGAGACCTCTTTGTGACTATAGGATCATTTCATTGTCGGTTTATTATTGGTGCTGTTATGCCATTTTTTATATCACATGGGAACCCCGTTTTGGAATTCTGTTAAAATATCAGTGCATCAATTGATCTTTGATACCGATTAACTAAGGAAGCAAATTGCCCTATTGTTTTTGTTCTCAGGAGATGTTGTTATCCATATTTTCCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTACGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCATTTTGAAGTAAAAACCGCTGCGTATTTTCCCCCGAGCAGCTGATGCTGAAGGAAAATGCAGTTTGTGGCAGCTGGTGAGGCAGATTACTTCTGTTTGTTGTGTCCTCTCACAAAACAGTTACCATGTGAAGTGTTGCAGAAGCAGCTGCATGAGTTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTATTATGAGAGCCCTATACCAAACTTTCTCCTGTCTCCTAACTCTCTCTCTCTCTCTCATGAATGACTGGTCTGATTTGAGATAGTTTTCAAGTAAAGTTAGTTGTTATGAATCAAGTTGGTTAGAAGGGCCCTGTTACTTAGAATAGTGAATTAAGATTCCATTTACTAAATGAGGAAAGCTTGTAGGAGAATTAAAATGAAATTGGTTTGGTCAACTATTATATTTAAACTTCTTGTATTATGAGGATTAGAGATTCTTCATTCATTCAATTCATACTGTTCTCATGGTTTGAAATGAGAATTGATTTTTGAGTTGTA

mRNA sequence

CGACAATTAGATTTGACAAATCGACATTGCTTCATCGTTTAAAAATATCTTCCCTCACGGCAAAAGGAACAAGCATGGCGTTATCCACTACCTTATCTCTTCACGGCGCCGGCGCCGGAACCTTGTTCGGCGGCGAGCTCCGGCCATTGGGTCACGATTATTTCAGAGTTTCCAAAAAACCCAGAAAACAAATTTTCTGCTCATGCTGGAATGGGTCCCCATTTCCATACCAAAACTGCATTTGGAGGATACCCTCTGCCAATAACTTCCATTTGAAGTCAATGGAGACTTCGCCATTGTTCGCCATCGGAGGAGAAGCTGAAGATGCCTTTTTATCGAATATGAATGACGACACTGATGACATGTACGATGATTTGTTCAAGAAGTATGGGAATGTGGTATTCAAGAGCAATGATCAAAAGCTTCCTAGTGCAGAAATTGACGACGATGCAGAAAGCCTTTCATTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTTTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACGGCATTTTCTCGTCCTCAGATTGATGCTATAGGATCCCGGATAAGAGACCTTGCTGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGACGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGAGATGTTGTTATCCATATTTTCCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTACGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCATTTTGAAGTAAAAACCGCTGCGTATTTTCCCCCGAGCAGCTGATGCTGAAGGAAAATGCAGTTTGTGGCAGCTGGTGAGGCAGATTACTTCTGTTTGTTGTGTCCTCTCACAAAACAGTTACCATGTGAAGTGTTGCAGAAGCAGCTGCATGAGTTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTATTATGAGAGCCCTATACCAAACTTTCTCCTGTCTCCTAACTCTCTCTCTCTCTCTCATGAATGACTGGTCTGATTTGAGATAGTTTTCAAGTAAAGTTAGTTGTTATGAATCAAGTTGGTTAGAAGGGCCCTGTTACTTAGAATAGTGAATTAAGATTCCATTTACTAAATGAGGAAAGCTTGTAGGAGAATTAAAATGAAATTGGTTTGGTCAACTATTATATTTAAACTTCTTGTATTATGAGGATTAGAGATTCTTCATTCATTCAATTCATACTGTTCTCATGGTTTGAAATGAGAATTGATTTTTGAGTTGTA

Coding sequence (CDS)

ATGGCGTTATCCACTACCTTATCTCTTCACGGCGCCGGCGCCGGAACCTTGTTCGGCGGCGAGCTCCGGCCATTGGGTCACGATTATTTCAGAGTTTCCAAAAAACCCAGAAAACAAATTTTCTGCTCATGCTGGAATGGGTCCCCATTTCCATACCAAAACTGCATTTGGAGGATACCCTCTGCCAATAACTTCCATTTGAAGTCAATGGAGACTTCGCCATTGTTCGCCATCGGAGGAGAAGCTGAAGATGCCTTTTTATCGAATATGAATGACGACACTGATGACATGTACGATGATTTGTTCAAGAAGTATGGGAATGTGGTATTCAAGAGCAATGATCAAAAGCTTCCTAGTGCAGAAATTGACGACGATGCAGAAAGCCTTTCATTTGCTGTATCAATGGCGAAGGTTGCAAGTGATGTAAAGGCTGCAGATATCCGGGTTTTATTTGTGAAACCTCTAGTTTATTGGACAAGATTTTTCATCATTGCAACGGCATTTTCTCGTCCTCAGATTGATGCTATAGGATCCCGGATAAGAGACCTTGCTGAGAAGAAGTATGGAAGAAGTCCTTCTGGTGACGTGAAGCCAAATTCCTGGACTTTATTGGATTTTGGAGATGTTGTTATCCATATTTTCCTACCCCAGCAGAGGGCATTCTATAACTTGGAAGAGTTCTACGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCATTTTGA

Protein sequence

MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIPSANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSAEIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQRPF

Homology

[Close]

BLAST of CaUC07G134390 vs. NCBI nr
Match: XP_004147757.1 (protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein Csa_014809 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 2.8e-131
Identity = 228/244 (93.44%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFG ELR LGHDYF V K+PRKQIFCSCWNGSPFPY+NC+WR+P
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           S NNFHLKSME+SPLFA+GGEAED FLSNMND+TDDMYD+LFKKYGNVVFKSNDQK PSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. NCBI nr
Match: XP_038876545.1 (protein Iojap, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 475.7 bits (1223), Expect = 2.4e-130
Identity = 231/244 (94.67%), Postives = 235/244 (96.31%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFGGELR LGHD FRVSK+PRKQ FCSCWNGSPFP QNCIW +P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELRQLGHDNFRVSKRPRKQNFCSCWNGSPFPNQNCIWGMP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           SANNFHLKSME SPLFA+ GEAED FLSNMNDDTDDMYDDLFKK+GNVVFKSNDQK PSA
Sbjct: 61  SANNFHLKSMECSPLFAVEGEAEDGFLSNMNDDTDDMYDDLFKKFGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. NCBI nr
Match: TYK16385.1 (Oligomerization domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 468.0 bits (1203), Expect = 5.0e-128
Identity = 225/244 (92.21%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFGGEL  LGH+YF V ++PRKQIFCSCWNGSPFPY+NCIWR+P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFCSCWNGSPFPYRNCIWRVP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           SANNF+LKS+E+SPLFA+ GEAED FLSNMNDDT+DMYD+LFKKYGNVVFKSNDQK PSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRS SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSSSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. NCBI nr
Match: KAA0062957.1 (Oligomerization domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 466.5 bits (1199), Expect = 1.4e-127
Identity = 225/244 (92.21%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFGGEL  LGH+YF V ++PRKQIF SCWNGSPFPY+NCIWR+P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           SANNF+LKS+E+SPLFA+ GEAED FLSNMNDDT+DMYD+LFKKYGNVVFKSNDQK PSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. NCBI nr
Match: KAG7031113.1 (Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450.7 bits (1158), Expect = 8.2e-123
Identity = 216/244 (88.52%), Postives = 230/244 (94.26%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALS  LSLHGAGAGT FGGE R LGHDYFRVS +PRKQ +CSCWNGS F   NCIW+IP
Sbjct: 519 MALSIVLSLHGAGAGTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSLNCIWKIP 578

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           S+NNFHLKSME+SPLFA+G EAED+FLSNMN+DTDDMYDDLFKK+G+VVFK +DQK P+A
Sbjct: 579 SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 638

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 639 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 698

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 699 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 758

Query: 241 QRPF 245
           Q+PF
Sbjct: 759 QQPF 762

[Close]

BLAST of CaUC07G134390 vs. ExPASy Swiss-Prot
Match: Q9LDY9 (Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.4e-79
Identity = 154/241 (63.90%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MA ST L++    AG L  G+ R L      + +K    + C        PY NC WR+ 
Sbjct: 1   MASSTGLTV----AGALLAGDFR-LPAVSSLIPRKTSSSLSCLSNRDLSSPY-NCCWRL- 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
            +    L S+  S  FA+G EAED FLSN+++DTD+M+DDLF KYG VVF+S D K P+A
Sbjct: 61  -SRGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESL+FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+
Sbjct: 121 EVDDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYG+  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+
Sbjct: 181 RDLAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 233

Query: 241 Q 242
           Q
Sbjct: 241 Q 233

[Close]

BLAST of CaUC07G134390 vs. ExPASy Swiss-Prot
Match: Q41822 (Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.2e-57
Identity = 109/170 (64.12%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 77  AIGGEAEDAFLSNMN----DDTDDMYDDLFKKYGNVVFKSNDQKLPSAEIDDDAESLSFA 136
           A    ++ A  SN+N    DD D + +DL K++G VV+ S     P+ E DDDAE LSFA
Sbjct: 58  ACRARSQSASSSNVNFGRGDDADKLLEDLLKQHGEVVYSSGGPPDPTVEADDDAECLSFA 117

Query: 137 VSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSP 196
           VS+AK AS++KA DIRVL V+ LVYWTRFFII TAFS  QIDAI S++RD+ EK++ +  
Sbjct: 118 VSLAKAASEIKATDIRVLCVRRLVYWTRFFIILTAFSNAQIDAISSKMRDIGEKQFSKVA 177

Query: 197 SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFENQR 243
           SGD KPNSWTLLDFGDVV+HIFLPQQRAFYNLEEFYGNATP+ELPF+ QR
Sbjct: 178 SGDTKPNSWTLLDFGDVVVHIFLPQQRAFYNLEEFYGNATPIELPFDTQR 227

[Close]

BLAST of CaUC07G134390 vs. ExPASy Swiss-Prot
Match: P73658 (Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsfS PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 134 SMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLAEKKYGRSPS 193
           ++A+ A + KA D+ +L V  + Y   +F+I T FSR Q+ AI   I    E  +G+ P+
Sbjct: 33  TIAQAAEERKAGDLVILKVTDVSYLADYFVICTGFSRTQVRAIADNIEKQVELVHGQLPT 92

Query: 194 GDVKPNS---WTLLDFGDVVIHIFLPQQRAFYNLEEFYGNA 232
              + NS   W L DFGDV++H F+P++R FY LE F+G+A
Sbjct: 93  -HTEGNSESIWVLQDFGDVLVHTFMPEEREFYKLEAFWGHA 132

[Close]

BLAST of CaUC07G134390 vs. ExPASy Swiss-Prot
Match: Q97P97 (Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=rsfS PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 135 MAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRD-LAEKKY-GRSP 194
           + K A + +A DI  L V+ L   T + +I ++ +  Q+DAI + IR+ +A+  + G   
Sbjct: 10  VVKAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREKVAQAGFKGSHV 69

Query: 195 SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
            GD     W LLD G VV+HIF  + RA YNLE+ +  A  V++
Sbjct: 70  EGDA-AGGWVLLDLGAVVVHIFSEEMRAHYNLEKLWHEANSVDI 112

[Close]

BLAST of CaUC07G134390 vs. ExPASy Swiss-Prot
Match: Q9KD89 (Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rsfS PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09
Identity = 38/111 (34.23%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 127 ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRIRDLA-E 186
           E L  AV+      D KA  +  L +K +     FF+I    S  Q+ AI   ++ +A E
Sbjct: 5   ELLQLAVN---AVDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKVAQE 64

Query: 187 KKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVEL 237
           +          +   W L+D GDVV+H+F   +RA+YNLE+ +G+A  VEL
Sbjct: 65  QGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWGDAPTVEL 112

[Close]

BLAST of CaUC07G134390 vs. ExPASy TrEMBL
Match: A0A0A0KVG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.4e-131
Identity = 228/244 (93.44%), Postives = 237/244 (97.13%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFG ELR LGHDYF V K+PRKQIFCSCWNGSPFPY+NC+WR+P
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           S NNFHLKSME+SPLFA+GGEAED FLSNMND+TDDMYD+LFKKYGNVVFKSNDQK PSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. ExPASy TrEMBL
Match: A0A5D3CY15 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001790 PE=3 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.4e-128
Identity = 225/244 (92.21%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFGGEL  LGH+YF V ++PRKQIFCSCWNGSPFPY+NCIWR+P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFCSCWNGSPFPYRNCIWRVP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           SANNF+LKS+E+SPLFA+ GEAED FLSNMNDDT+DMYD+LFKKYGNVVFKSNDQK PSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRS SGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSSSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. ExPASy TrEMBL
Match: A0A5A7V7J6 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00520 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 7.0e-128
Identity = 225/244 (92.21%), Postives = 236/244 (96.72%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALSTTLSLHGAGAGTLFGGEL  LGH+YF V ++PRKQIF SCWNGSPFPY+NCIWR+P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           SANNF+LKS+E+SPLFA+ GEAED FLSNMNDDT+DMYD+LFKKYGNVVFKSNDQK PSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           QRPF
Sbjct: 241 QRPF 244

[Close]

BLAST of CaUC07G134390 vs. ExPASy TrEMBL
Match: A0A6J1FNP0 (protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.8e-123
Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALS  LSLHGAGAGT FGG+ R LGHDYF VS +PRKQ +CSCWNGS F  QNCIW+IP
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSQNCIWKIP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           S+NNFHLKSME+SPLFA+G EAED+FLSNMN+DTDDMYDDLFKK+G+VVFK +DQK P+A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]

BLAST of CaUC07G134390 vs. ExPASy TrEMBL
Match: A0A6J1IZC7 (protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.2e-122
Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MALS  LSLHGAGA T FGGE R LGHDYFRVS +PRKQ +CSCWNGS F  +NCIW+IP
Sbjct: 1   MALSIVLSLHGAGAVTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
           S++NFHLKSME+SPLF++G EAED+FLSNMN+DTDDMYDDLFKK+GNVVFK NDQK P+A
Sbjct: 61  SSHNFHLKSMESSPLFSVGKEAEDSFLSNMNEDTDDMYDDLFKKHGNVVFKRNDQKPPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

Query: 241 QRPF 245
           Q+PF
Sbjct: 241 QQPF 244

[Close]

BLAST of CaUC07G134390 vs. TAIR 10
Match: AT3G12930.1 (Lojap-related protein )

HSP 1 Score: 296.2 bits (757), Expect = 2.4e-80
Identity = 154/241 (63.90%), Postives = 182/241 (75.52%), Query Frame = 0


Query: 1   MALSTTLSLHGAGAGTLFGGELRPLGHDYFRVSKKPRKQIFCSCWNGSPFPYQNCIWRIP 60
           MA ST L++    AG L  G+ R L      + +K    + C        PY NC WR+ 
Sbjct: 1   MASSTGLTV----AGALLAGDFR-LPAVSSLIPRKTSSSLSCLSNRDLSSPY-NCCWRL- 60

Query: 61  SANNFHLKSMETSPLFAIGGEAEDAFLSNMNDDTDDMYDDLFKKYGNVVFKSNDQKLPSA 120
            +    L S+  S  FA+G EAED FLSN+++DTD+M+DDLF KYG VVF+S D K P+A
Sbjct: 61  -SRGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTA 120

Query: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESL+FAV +AKVASDVKA DI+VLFVKPLVYWTRFFIIATAFSRPQIDAIGSR+
Sbjct: 121 EVDDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRM 180

Query: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240
           RDLAEKKYG+  +GDVKPNSWTLLDFGDVVIH+FLP QR FYNLE+FYGNA  +ELPFE+
Sbjct: 181 RDLAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 233

Query: 241 Q 242
           Q
Sbjct: 241 Q 233

The following BLAST results are available for this feature:

BLAST of CaUC07G134390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147757.1	2.8e-131	93.44	protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein ...	[more]
XP_038876545.1	2.4e-130	94.67	protein Iojap, chloroplastic isoform X2 [Benincasa hispida]	[more]
TYK16385.1	5.0e-128	92.21	Oligomerization domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0062957.1	1.4e-127	92.21	Oligomerization domain-containing protein [Cucumis melo var. makuwa]	[more]
KAG7031113.1	8.2e-123	88.52	Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CaUC07G134390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDY9	3.4e-79	63.90	Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1	[more]
Q41822	6.2e-57	64.12	Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1	[more]
P73658	1.7e-14	40.59	Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
Q97P97	4.4e-10	36.54	Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain A...	[more]
Q9KD89	4.8e-09	34.23	Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DS...	[more]

BLAST of CaUC07G134390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVG5	1.4e-131	93.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1	[more]
A0A5D3CY15	2.4e-128	92.21	Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7V7J6	7.0e-128	92.21	Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1FNP0	8.8e-123	88.11	protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 ...	[more]
A0A6J1IZC7	1.2e-122	88.11	protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV...	[more]

BLAST of CaUC07G134390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12930.1	2.4e-80	63.90	Lojap-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 128..237 e-value: 1.5E-23 score: 84.7
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 129..238
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	TIGRFAM	TIGR00090	TIGR00090	coord: 135..228 e-value: 1.3E-20 score: 71.4
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	PANTHER	PTHR21043	IOJAP SUPERFAMILY ORTHOLOG	coord: 1..243
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	HAMAP	MF_01477	Iojap_RsfS	coord: 126..229 score: 18.436813
None	No IPR available	PFAM	PF02410	RsfS	coord: 135..228 e-value: 4.5E-20 score: 71.9
None	No IPR available	PANTHER	PTHR21043:SF2	PROTEIN IOJAP, CHLOROPLASTIC	coord: 1..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC07G134390.1	CaUC07G134390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090071	negative regulation of ribosome biogenesis
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0043023	ribosomal large subunit binding