CaUC07G126640 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGATGAATAACCTCAAATATTCCATGGCTTTAGTTTGGGTTATCAAGGCATTATTAGCCATGGTTCAAACAAGCTTTGCAGCTCCATTTCAGCATTGGACTGTGCAAATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAATTCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGGCTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGGTCAGTAAGAGATGATGGAATTTATGTTAAAAATAATCCTGAAAATAAGTTTGAGTTTCATGCCAAATGGTTGCCTGGTTGGTAA ATGGTGATGAATAACCTCAAATATTCCATGGCTTTAGTTTGGGTTATCAAGGCATTATTAGCCATGGTTCAAACAAGCTTTGCAGCTCCATTTCAGCATTGGACTGTGCAAATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAATTCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGGCTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGGTCAGTAAGAGATGATGGAATTTATGTTAAAAATAATCCTGAAAATAAGTTTGAGTTTCATGCCAAATGGTTGCCTGGTTGGTAA ATGGTGATGAATAACCTCAAATATTCCATGGCTTTAGTTTGGGTTATCAAGGCATTATTAGCCATGGTTCAAACAAGCTTTGCAGCTCCATTTCAGCATTGGACTGTGCAAATATCCAATGACATGCAAAGCAAACAAACCTTGTTTCTTCATTGCAAGTCAAAAGACAATGATTTGGGACAACAAAATCTAGGATTTGAGCAAACATTTTCATGGAAATTCAGAGAGAATTTGTGGCAAACAACATTGTATTGGTGCTACATGCACAAGAAAGAACAAAATCATATTGCTTTAGAAGTGTTTTGGCCAGAATCAGAGTCTAAATCTTGGCTTTCCCATAGATGTGAAGGTGAAGGGTGCTTTTGGTCAGTAAGAGATGATGGAATTTATGTTAAAAATAATCCTGAAAATAAGTTTGAGTTTCATGCCAAATGGTTGCCTGGTTGGTAA MVMNNLKYSMALVWVIKALLAMVQTSFAAPFQHWTVQISNDMQSKQTLFLHCKSKDNDLGQQNLGFEQTFSWKFRENLWQTTLYWCYMHKKEQNHIALEVFWPESESKSWLSHRCEGEGCFWSVRDDGIYVKNNPENKFEFHAKWLPGW Homology
BLAST of CaUC07G126640 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 1.2e-44 Identity = 89/150 (59.33%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of CaUC07G126640 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35 Identity = 81/148 (54.73%), Postives = 95/148 (64.19%), Query Frame = 0
BLAST of CaUC07G126640 vs. NCBI nr
Match: KGN60342.2 (hypothetical protein Csa_002569, partial [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35 Identity = 81/148 (54.73%), Postives = 95/148 (64.19%), Query Frame = 0
BLAST of CaUC07G126640 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32 Identity = 76/148 (51.35%), Postives = 94/148 (63.51%), Query Frame = 0
BLAST of CaUC07G126640 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-32 Identity = 76/148 (51.35%), Postives = 94/148 (63.51%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.5e-24 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23 Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11 Identity = 36/121 (29.75%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08 Identity = 39/125 (31.20%), Postives = 61/125 (48.80%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 7.3e-08 Identity = 42/146 (28.77%), Postives = 68/146 (46.58%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy TrEMBL
Match: A0A6J1CPR8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013612 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28 Identity = 56/134 (41.79%), Postives = 85/134 (63.43%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy TrEMBL
Match: A0A5E4EKH7 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B010815 PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 2.9e-28 Identity = 59/127 (46.46%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy TrEMBL
Match: A0A5E4EJG4 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B017645 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28 Identity = 63/136 (46.32%), Postives = 87/136 (63.97%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy TrEMBL
Match: A0A251N118 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28 Identity = 63/135 (46.67%), Postives = 87/135 (64.44%), Query Frame = 0
BLAST of CaUC07G126640 vs. ExPASy TrEMBL
Match: A0A251N105 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28 Identity = 59/127 (46.46%), Postives = 79/127 (62.20%), Query Frame = 0
BLAST of CaUC07G126640 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25 Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = 0
BLAST of CaUC07G126640 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24 Identity = 47/116 (40.52%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of CaUC07G126640 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 69.7 bits (169), Expect = 2.2e-12 Identity = 36/121 (29.75%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of CaUC07G126640 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 36/113 (31.86%), Postives = 57/113 (50.44%), Query Frame = 0
BLAST of CaUC07G126640 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 59.7 bits (143), Expect = 2.3e-09 Identity = 39/125 (31.20%), Postives = 61/125 (48.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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