CaUC06G123060 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGATTTTGTGATTTTCATCCAAAATCACAAAATTTTCGAAATATACCATCCGTAGAAACGGGAGGCGAGGCGTGAGAGGAGGGGGCATAAAAGGGAGGTGAGAATTTTTGAAAGAAAAGAGAAAAACCATTTTTTGTTCTGTTCTGAATCGTGGCGGCCTGTTTCAATTCCTTTGGTTTTAAGCTTCATCCATTATCTCTATCCAACCCCTGGTTGTCTCTTTGTTGATTAGATATGGTTTTGTTCAGTGGGATGCAGAAGCTGGAAATAAGAGGGACTATGGACTGGGGAACTGGGCTTCCACCGCCTTATTGGTAAAGCAATCTTCTCTAAACTTGTAATCTCCAATTTCCCTGTTTGCAGGCTTGTTTCTAAACTTTGGAATCAAATTGTTTTGAATCGCACTTCCTCTTCTACATTACAATTCCTTACTAATGATTTCCTTCTATGCACCTCTGATCGTGTCCCCAATTGCCAATTTACTGGTTTACGCAATCCCAACATGCATTGTATCAATCTTGAGACTACCAAACATTTGGATGTTGCCTTTGATTTGGAATTGGTCCCTTATCTCAATCAACAATCAAAGTAATGGTTTGTTGTTTATTACCAAATGTGCTTTTTACCTATTCAATCCCATGACTAATGAGTTCTTTCACGTTTCTAGACATGATCTAGATGATGATATTCACGTTTTTGGATTTGGCTTTAACCCTACCTCCAAACAATACAAATATCTAGAACTATTGTCCCTAAACACAATTGAAGAACTTAGTATCATAATGGATGTTATGACGTTTGGTGGGTGTGGAACCGAACTTAACCAAAACGAATGGATGCATCTCCACTTTCTCCCTTTTGACATCATTCTTCATGGTGATTACTTCAATGGAGTCATCTATTGGTTGGGAAAAGAAAAGGATAAAGAAAATGAGTATATCATATATGCTCTTGGAAGCTCGCCCTTGCTCAAGAGTGGGGACCTTGTATCAATTTAATGGACCATTTATGCAACTTTTTTATTTGACTTGCCAACAAAGACTATTCAAGTGAATAGTGTGGAGGATGTTCGACATAGATTCATGGACAAGGGAATTTGTTATTAATGACATCCCAAATGATTGGAGCTCTCTCAAGCTCGTCAGAGCCTTTGAAGATGGGGAGATATTGTGTATGATCAATATGGACTTTTTTTGTTTCTACAATCTTCACTGGGAGGAAGAAGATCATACAGAATAA ATGGAGAGATTTTGTGATTTTCATCCAAAATCACAAAATTTTCGAAATATACCATCCGTAGAAACGGGAGGCGAGGCATATGGTTTTGTTCAGTGGGATGCAGAAGCTGGAAATAAGAGGGACTATGGACTGGGGAACTGGGCTTCCACCGCCTTATTGGTAAAGCAATCTTCTCTAAACTTACATGATCTAGATGATGATATTCACGTTTTTGGATTTGGCTTTAACCCTACCTCCAAACAATACAAATATCTAGAACTATTGTCCCTAAACACAATTGAAGAACTTAGTATCATAATGGATGTTATGACGTTTGGTGGGTGTGGAACCGAACTTAACCAAAACGAATGGATGCATCTCCACTTTCTCCCTTTTGACATCATTCTTCATGGTGATTACTTCAATGGAGTCATCTATTGGTTGGGAAAAGAAAAGGATAAAGAAAATGAGTATATCATATATGCTCTTGGAAGCTCGCCCTTGCTCAAGATGTGGAGGATGTTCGACATAGATTCATGGACAAGGGAATTTGTTATTAATGACATCCCAAATGATTGGAGCTCTCTCAAGCTCGTCAGAGCCTTTGAAGATGGGGAGATATTGTGTATGATCAATATGGACTTTTTTTGTTTCTACAATCTTCACTGGGAGGAAGAAGATCATACAGAATAA ATGGAGAGATTTTGTGATTTTCATCCAAAATCACAAAATTTTCGAAATATACCATCCGTAGAAACGGGAGGCGAGGCATATGGTTTTGTTCAGTGGGATGCAGAAGCTGGAAATAAGAGGGACTATGGACTGGGGAACTGGGCTTCCACCGCCTTATTGGTAAAGCAATCTTCTCTAAACTTACATGATCTAGATGATGATATTCACGTTTTTGGATTTGGCTTTAACCCTACCTCCAAACAATACAAATATCTAGAACTATTGTCCCTAAACACAATTGAAGAACTTAGTATCATAATGGATGTTATGACGTTTGGTGGGTGTGGAACCGAACTTAACCAAAACGAATGGATGCATCTCCACTTTCTCCCTTTTGACATCATTCTTCATGGTGATTACTTCAATGGAGTCATCTATTGGTTGGGAAAAGAAAAGGATAAAGAAAATGAGTATATCATATATGCTCTTGGAAGCTCGCCCTTGCTCAAGATGTGGAGGATGTTCGACATAGATTCATGGACAAGGGAATTTGTTATTAATGACATCCCAAATGATTGGAGCTCTCTCAAGCTCGTCAGAGCCTTTGAAGATGGGGAGATATTGTGTATGATCAATATGGACTTTTTTTGTTTCTACAATCTTCACTGGGAGGAAGAAGATCATACAGAATAA MERFCDFHPKSQNFRNIPSVETGGEAYGFVQWDAEAGNKRDYGLGNWASTALLVKQSSLNLHDLDDDIHVFGFGFNPTSKQYKYLELLSLNTIEELSIIMDVMTFGGCGTELNQNEWMHLHFLPFDIILHGDYFNGVIYWLGKEKDKENEYIIYALGSSPLLKMWRMFDIDSWTREFVINDIPNDWSSLKLVRAFEDGEILCMINMDFFCFYNLHWEEEDHTE Homology
BLAST of CaUC06G123060 vs. NCBI nr
Match: XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida]) HSP 1 Score: 175.6 bits (444), Expect = 4.7e-40 Identity = 88/195 (45.13%), Postives = 111/195 (56.92%), Query Frame = 0
BLAST of CaUC06G123060 vs. NCBI nr
Match: TYK24751.1 (F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 8.5e-34 Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of CaUC06G123060 vs. NCBI nr
Match: KAA0039746.1 (F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 154.8 bits (390), Expect = 8.5e-34 Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of CaUC06G123060 vs. NCBI nr
Match: KAA0039747.1 (F-box protein [Cucumis melo var. makuwa] >TYK24750.1 F-box protein [Cucumis melo var. makuwa]) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-31 Identity = 82/198 (41.41%), Postives = 107/198 (54.04%), Query Frame = 0
BLAST of CaUC06G123060 vs. NCBI nr
Match: XP_038875053.1 (F-box protein At3g07870-like [Benincasa hispida]) HSP 1 Score: 135.2 bits (339), Expect = 7.0e-28 Identity = 78/194 (40.21%), Postives = 100/194 (51.55%), Query Frame = 0
BLAST of CaUC06G123060 vs. ExPASy TrEMBL
Match: A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 4.1e-34 Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of CaUC06G123060 vs. ExPASy TrEMBL
Match: A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 4.1e-34 Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = 0
BLAST of CaUC06G123060 vs. ExPASy TrEMBL
Match: A0A5A7TE00 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003130 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 5.0e-32 Identity = 82/198 (41.41%), Postives = 107/198 (54.04%), Query Frame = 0
BLAST of CaUC06G123060 vs. ExPASy TrEMBL
Match: A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 6.6e-32 Identity = 79/203 (38.92%), Postives = 106/203 (52.22%), Query Frame = 0
BLAST of CaUC06G123060 vs. ExPASy TrEMBL
Match: A0A0A0LPC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014420 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 5.4e-26 Identity = 77/205 (37.56%), Postives = 101/205 (49.27%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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