CaUC06G117360 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G117360
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
LocationCiama_Chr06: 21551349 .. 21552054 (-)
RNA-Seq ExpressionCaUC06G117360
SyntenyCaUC06G117360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTAAATCTAAGCGCTATGGGCCCAGCCCAAGTAGGGCCCACTTTATAAGCAGTCCATGATATTTGGTGGGCCTTTTATTGTGGGCTTTCTGGTCCAGTTTAGAAGGAAAAAAAAACTCTTTTATACGGATATAAATGAAAATATATTTATTAATTTTGAAAAAAATGAAAAAAGAAATTGGATAATTAAAGTAAGGCCGATGGACCTCAGCGAAGTCCATTGCCCAAAAGAAAAATGCCCAAATTTTAAGAAAAAGGGGAAAAAGAAGGAAAGTCTTCACCGAATCGTCATCTACCAAACTGAGTCCAATTAGCAACTCGGGTTCGTTTGAAGCCCAATCTCCGATTCTCTCTCTTCCTCTCTCGTTCGCTGCAAAAATTTTCAGGCTTCATCGGTTTACCAGACCAGGCCAGGCCACCTCGATTCTCATCGTGGATCTTCTCATAGTCTTCTTGGATCGAAACCACGGGTAAAATCCGAGCTCTTTTTTTTCATGATTTTGAAATCGACGAAATTAGATTTTTACCTCGTTTCCTTTACTCTCTTGACTTTTCAGTTTCGTATTGGAATCTCGATTTCTGGAGTTGTTGATTTTGGAATGAATTCTGTTTGTGTTTTTTCTTCTGGGGAATTTAGGGTATTGGTCTTCATTTCTTCTGTTGCTAATTTTGTTAGTCCGGTGAAGTTCGAGTTCCGAAATTGA

mRNA sequence

ATGCTAAATCTAAGCGCTATGGGCCCAGCCCAAGCTTCATCGGTTTACCAGACCAGGCCAGGCCACCTCGATTCTCATCGTGGATCTTCTCATAGTCTTCTTGGATCGAAACCACGGTTTCGTATTGGAATCTCGATTTCTGGAGTTGTTGATTTTGGAATGAATTCTGTTTGTGTTTTTTCTTCTGGGGAATTTAGGGTATTGGTCTTCATTTCTTCTGTTGCTAATTTTGTTAGTCCGGTGAAGTTCGAGTTCCGAAATTGA

Coding sequence (CDS)

ATGCTAAATCTAAGCGCTATGGGCCCAGCCCAAGCTTCATCGGTTTACCAGACCAGGCCAGGCCACCTCGATTCTCATCGTGGATCTTCTCATAGTCTTCTTGGATCGAAACCACGGTTTCGTATTGGAATCTCGATTTCTGGAGTTGTTGATTTTGGAATGAATTCTGTTTGTGTTTTTTCTTCTGGGGAATTTAGGGTATTGGTCTTCATTTCTTCTGTTGCTAATTTTGTTAGTCCGGTGAAGTTCGAGTTCCGAAATTGA

Protein sequence

MLNLSAMGPAQASSVYQTRPGHLDSHRGSSHSLLGSKPRFRIGISISGVVDFGMNSVCVFSSGEFRVLVFISSVANFVSPVKFEFRN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G117360.1CaUC06G117360.1mRNA