CaUC06G115630 (gene) Watermelon (USVL246-FR2) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCACGGAGCTCCGGTGTGACTGCGGCGCAGTGGATTGTTCCTCACCGATTCAGGCGACTATAAAACGCTCCGAGATCTCCGATCTTTCTCTCACACTCGGCGCCCTCGTTCATTTTTCCCCAAAATCGATCAACTTCGAATTGGAATTCTTTTCTCTATGAGGACCGGAATGCGGTACCACGCCGGCAGTGAGGATCACCGGCAGGAGTCTCATTTCCTCGAAGCTTGTTTTCTTTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAGTGAGTGACTGAGCTTCAAATTCGATTTATCGCTTTTCGATTTCAATTTCTAGGGTTATTATTTTTTTTTTTTTCCCTTTTGTGTGATTTCGATACTGACGGATTGGATTGGATTGGATTGGATTTCAGAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGTTCGACGAAGCGCAAGAGAAGAGCTGGAGAATCTCTTCGTCGTCGGCGTCGTCGTCTTCGGCAGATAAATCGACGGCGTCTAGTAAGAAGAATGTACGAACGGATACAGTTGCAGTGGCCTGAAGTTCGATGAGGGAATTTTGAGGAATAGAAAAAAAAATTGGGGGAAAACGGAACCCTAGAAATTTTCGGAGAGAGTAAAAGAAGAAAAAATCAAATGAGAAAGGTAAAGAGATTCAGATTGAGTGCAATGGAGATTGAGAAAGATTTGAAATCTCTTCCTGTGAAGAAGATCGGATTGGCAAACACTATACCGAACTGTTCTGCTTCGATCATTTTACTCTGCTTTTTAGTTTTTACATTTTTTTTTTCTTGGTTTATGGAGATATTCATATTCCTCTGTTTACTAAATTCTGTGGAAAAGAAATTGATGATCAACCATGGAAGTTCTATTGAAAATTTTACGAGATTATAGCTTTGGGAATTATTAAACTGGATACATTATTGC CTCACGGAGCTCCGGTGTGACTGCGGCGCAGTGGATTGTTCCTCACCGATTCAGGCGACTATAAAACGCTCCGAGATCTCCGATCTTTCTCTCACACTCGGCGCCCTCGTTCATTTTTCCCCAAAATCGATCAACTTCGAATTGGAATTCTTTTCTCTATGAGGACCGGAATGCGGTACCACGCCGGCAGTGAGGATCACCGGCAGGAGTCTCATTTCCTCGAAGCTTGTTTTCTTTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGTTCGACGAAGCGCAAGAGAAGAGCTGGAGAATCTCTTCGTCGTCGGCGTCGTCGTCTTCGGCAGATAAATCGACGGCGTCTAGTAAGAAGAATGTACGAACGGATACAGTTGCAGTGGCCTGAAGTTCGATGAGGGAATTTTGAGGAATAGAAAAAAAAATTGGGGGAAAACGGAACCCTAGAAATTTTCGGAGAGAGTAAAAGAAGAAAAAATCAAATGAGAAAGGTAAAGAGATTCAGATTGAGTGCAATGGAGATTGAGAAAGATTTGAAATCTCTTCCTGTGAAGAAGATCGGATTGGCAAACACTATACCGAACTGTTCTGCTTCGATCATTTTACTCTGCTTTTTAGTTTTTACATTTTTTTTTTCTTGGTTTATGGAGATATTCATATTCCTCTGTTTACTAAATTCTGTGGAAAAGAAATTGATGATCAACCATGGAAGTTCTATTGAAAATTTTACGAGATTATAGCTTTGGGAATTATTAAACTGGATACATTATTGC ATGAGGACCGGAATGCGGTACCACGCCGGCAGTGAGGATCACCGGCAGGAGTCTCATTTCCTCGAAGCTTGTTTTCTTTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGAAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAAGAACAGATTGAGTTCGACGAAGCGCAAGAGAAGAGCTGGAGAATCTCTTCGTCGTCGGCGTCGTCGTCTTCGGCAGATAAATCGACGGCGTCTAGTAAGAAGAATGTACGAACGGATACAGTTGCAGTGGCCTGA MRTGMRYHAGSEDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEFDEAQEKSWRISSSSASSSSADKSTASSKKNVRTDTVAVA Homology
BLAST of CaUC06G115630 vs. NCBI nr
Match: KAG6574826.1 (FCS-Like Zinc finger 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181.0 bits (458), Expect = 4.8e-42 Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of CaUC06G115630 vs. NCBI nr
Match: XP_038906621.1 (FCS-Like Zinc finger 3-like [Benincasa hispida]) HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41 Identity = 91/101 (90.10%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of CaUC06G115630 vs. NCBI nr
Match: XP_023548734.1 (uncharacterized protein LOC111807300 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.6 bits (449), Expect = 5.3e-41 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 0
BLAST of CaUC06G115630 vs. NCBI nr
Match: KGN61405.1 (hypothetical protein Csa_006269 [Cucumis sativus]) HSP 1 Score: 176.0 bits (445), Expect = 1.6e-40 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of CaUC06G115630 vs. NCBI nr
Match: KAG7013404.1 (hypothetical protein SDJN02_23570 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39 Identity = 89/102 (87.25%), Postives = 93/102 (91.18%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.3e-17 Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-15 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.0e-10 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy TrEMBL
Match: A0A0A0LHK0 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G118280 PE=3 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 7.5e-41 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy TrEMBL
Match: A0A6J1H3Y3 (uncharacterized protein LOC111460275 OS=Cucurbita moschata OX=3662 GN=LOC111460275 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy TrEMBL
Match: A0A6J1HKB3 (uncharacterized protein LOC111464337 OS=Cucurbita moschata OX=3662 GN=LOC111464337 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39 Identity = 85/97 (87.63%), Postives = 88/97 (90.72%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy TrEMBL
Match: A0A6J1KJX8 (uncharacterized protein LOC111494701 OS=Cucurbita maxima OX=3661 GN=LOC111494701 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.4e-39 Identity = 85/97 (87.63%), Postives = 88/97 (90.72%), Query Frame = 0
BLAST of CaUC06G115630 vs. ExPASy TrEMBL
Match: A0A6J1L079 (uncharacterized protein LOC111499186 OS=Cucurbita maxima OX=3661 GN=LOC111499186 PE=3 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 9.2e-39 Identity = 88/99 (88.89%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of CaUC06G115630 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 87.8 bits (216), Expect = 5.2e-18 Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of CaUC06G115630 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 84.0 bits (206), Expect = 7.5e-17 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of CaUC06G115630 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 83.6 bits (205), Expect = 9.8e-17 Identity = 43/85 (50.59%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of CaUC06G115630 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of CaUC06G115630 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 60.5 bits (145), Expect = 8.8e-10 Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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