CaUC06G109670 (gene) Watermelon (USVL246-FR2) v1

Overview


Name	CaUC06G109670
Type	gene
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Unknown protein
Location	Ciama_Chr06: 3911415 .. 3912144 (+)
RNA-Seq Expression	CaUC06G109670
Synteny	CaUC06G109670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCAGCATTACTAGGAATCATGGAAGTGTTGGAATGCATGAGGCATCAAGAGCAAAATGGAAATGGGATCGTGAAGCATGAAAACGATGGAAAAAAGAGTTGACTTGAAAACGGTGGGAAAAAAATGAATTTGATATTACAAATTGGGCTCAAAATGCTCAATCGAGACATGGGTTCTAAATTACACTACACCCAATCTCATTCCAAACTTGACCCCAAACAGCCTCGATATGTTTTTTAAATCTACATTTAACAGTTATTACGAGACATTAATGTGTTGAATGGTTCCTAGTTAGTGGAACAAGAAAGATATGCATCAATATTAGATACACAATCAAAGAATTTCCCTCAAGGAAGAATAAATTTGTCCCCACATGGGCGTTGAAGTTGGATACTTGAGAAAGAAGCAAATTGAGACAGGTCGTCATCACAAGCAATCAAATTCTTCAAATGCCACCAACTTGGGTACCACGGAAGGCCACTTGTATAAGAAGGCACATAAACAGAGTAATGAGTGCATCAAAATGAACTCAGTGATGAACATAAGGCCAGTAGTTATATTTGTAGCAGGAGCCATGTTCGGTTCGCTGCTGACTCGATCCTTTCCGCGCTGCCACCACCACCTCCACCAACTCCGCCGATGCTACAGCCGTGGTGCTGAAACCAGCTTCACCAAGCAACCAAGTATGGAGTCTAGTGGAGGAGAAATTAGGAATGTTGATTAA

mRNA sequence

ATGTCCTCAGCATTACTAGGAATCATGGAAGTGTTGGAATGCATGAGGCATCAAGAGCAAAATGGAAATGGGATCGTGAAGCATGAAAACGATGGAAAAAAGAGTCGTCATCACAAGCAATCAAATTCTTCAAATGCCACCAACTTGGGTACCACGGAAGGCCACTTGTATAAGAAGGCACATAAACAGAGTAATGAGTGCATCAAAATGAACTCAGTGATGAACATAAGGCCAGTAGTTATATTTGTAGCAGGAGCCATGTTCGGTTCGCTGCTGACTCGATCCTTTCCGCGCTGCCACCACCACCTCCACCAACTCCGCCGATGCTACAGCCGTGGTGCTGAAACCAGCTTCACCAAGCAACCAAGTATGGAGTCTAGTGGAGGAGAAATTAGGAATGTTGATTAA

Coding sequence (CDS)

ATGTCCTCAGCATTACTAGGAATCATGGAAGTGTTGGAATGCATGAGGCATCAAGAGCAAAATGGAAATGGGATCGTGAAGCATGAAAACGATGGAAAAAAGAGTCGTCATCACAAGCAATCAAATTCTTCAAATGCCACCAACTTGGGTACCACGGAAGGCCACTTGTATAAGAAGGCACATAAACAGAGTAATGAGTGCATCAAAATGAACTCAGTGATGAACATAAGGCCAGTAGTTATATTTGTAGCAGGAGCCATGTTCGGTTCGCTGCTGACTCGATCCTTTCCGCGCTGCCACCACCACCTCCACCAACTCCGCCGATGCTACAGCCGTGGTGCTGAAACCAGCTTCACCAAGCAACCAAGTATGGAGTCTAGTGGAGGAGAAATTAGGAATGTTGATTAA

Protein sequence

MSSALLGIMEVLECMRHQEQNGNGIVKHENDGKKSRHHKQSNSSNATNLGTTEGHLYKKAHKQSNECIKMNSVMNIRPVVIFVAGAMFGSLLTRSFPRCHHHLHQLRRCYSRGAETSFTKQPSMESSGGEIRNVD

Homology

The following BLAST results are available for this feature:

BLAST of CaUC06G109670 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC06G109670 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC06G109670 vs.


Match Name	E-value	Identity	Description

BLAST of CaUC06G109670 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CaUC06G109670.1	CaUC06G109670.1	mRNA