CaUC06G107410 (gene) Watermelon (USVL246-FR2) v1

Overview
NameCaUC06G107410
Typegene
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionEmbryo sac development arrest protein
LocationCiama_Chr06: 986389 .. 986796 (-)
RNA-Seq ExpressionCaUC06G107410
SyntenyCaUC06G107410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCCCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA

mRNA sequence

ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCCCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA

Coding sequence (CDS)

ATGAATACCACCAAAACGATGCGTTTACCTCCTCGTAGATTAATGACGTCACCCAGGCCCAATAAGAGAAAAGAAAGAGAGGGCCTTGATGATGAGGCCCACCAACTATCATTAACGGCTAAAGTACCGAGGCAGCCGCCGCCGTCTCATGCGAACCAGCTCTTAGCCGGCTACTTGGCTCACGAGTTCCTCACTAAAGGGACTCTCTTCGGCCAGGCTTGGGATCCTGATCTTCCGGATCCGACTATGGCTTCTTCACTCCCTGAGCCAAGCGAGAAACGCCAAGCCGAACTGCACCCCAAGAGTTACCAATCCTACGTGGAGGTAGCTAATTTGTTGAAACATAGTGGGCCCCACTTTCAAGGTATTGTAAATCCCACCCAGCTAGCTCACTTGCTAAACTTATGA

Protein sequence

MNTTKTMRLPPRRLMTSPRPNKRKEREGLDDEAHQLSLTAKVPRQPPPSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQAELHPKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL
Homology
BLAST of CaUC06G107410 vs. NCBI nr
Match: XP_038906548.1 (uncharacterized protein LOC120092519 [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.5e-52
Identity = 120/147 (81.63%), Postives = 123/147 (83.67%), Query Frame = 0

Query: 1   MNTTKTMRLPPRRLMTS----PRPNKRKEREGL-DDEAHQLSLTAKVPR---QPPPSHAN 60
           MNTTKTMRLPPRRLMTS    PRP KRKEREGL DDEAHQLSLTAKVP+    PPPSH+N
Sbjct: 1   MNTTKTMRLPPRRLMTSPRPIPRPIKRKEREGLDDDEAHQLSLTAKVPKPPPPPPPSHSN 60

Query: 61  QLLAGYLAHEFLTKGTLFGQAWDPDLPDPTM----ASSLPEPSEKRQAELHPKSYQSYVE 120
            LLAGYLAHEFLTKGTLFGQAWD   PDP M    ASS  EPSEK Q ELHPK+YQSYVE
Sbjct: 61  HLLAGYLAHEFLTKGTLFGQAWDK--PDPAMASASASSPAEPSEKHQDELHPKNYQSYVE 120

Query: 121 VANLLKHSGPHFQGIVNPTQLAHLLNL 136
           VANLLKHSGPHFQGIVNPTQLA LLNL
Sbjct: 121 VANLLKHSGPHFQGIVNPTQLARLLNL 145

BLAST of CaUC06G107410 vs. NCBI nr
Match: KAG7014604.1 (hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 189.1 bits (479), Expect = 2.5e-44
Identity = 101/133 (75.94%), Postives = 109/133 (81.95%), Query Frame = 0

Query: 7   MRLPPRRLMT----SPRPNKRKEREGLDDEAHQLSLTAKVPRQPPPSHANQLLAGYLAHE 66
           MRLPPRRLMT    S RPNKRKER+G DDEAHQLS TAKV + P P  +N LLAGYLAHE
Sbjct: 1   MRLPPRRLMTSDGPSSRPNKRKERKGFDDEAHQLSFTAKVSK-PTPPQSNHLLAGYLAHE 60

Query: 67  FLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQAELHPKSYQSYVEVANLLKHSGPHFQG 126
           F TKGTLFGQAWD   PD +MA+S P+ +EKRQAELHPK+YQSYVEVANLLKH G HFQG
Sbjct: 61  FFTKGTLFGQAWDH--PDVSMAASPPDLNEKRQAELHPKNYQSYVEVANLLKHGGAHFQG 120

Query: 127 IVNPTQLAHLLNL 136
           IVNPTQLA  LNL
Sbjct: 121 IVNPTQLARSLNL 130

BLAST of CaUC06G107410 vs. NCBI nr
Match: XP_011656778.1 (uncharacterized protein LOC105435768 [Cucumis sativus] >KGN46382.1 hypothetical protein Csa_005722 [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 4.6e-43
Identity = 111/164 (67.68%), Postives = 116/164 (70.73%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSPRP-NKRKEREGL-----DDEAHQLSLTAKVPRQPPPSHANQLL 61
           NTTKTMRLPPRRLMTSPRP NKRKEREGL     DDEAHQL LTAKVP+  P  H+ QLL
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHSKQLL 64

Query: 62  AGYLAHEFLTKGTLFGQAWDPDLPDP-------TMASS-------------LPEPSEKRQ 121
           AGYLAHEFLTKGTLFGQ WD   PDP        MASS               EP EKRQ
Sbjct: 65  AGYLAHEFLTKGTLFGQTWDN--PDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKRQ 124

Query: 122 AEL---HP-KSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           AE    HP K+YQSYVEVANLLKH+GPH +GIVNPTQLA  LNL
Sbjct: 125 AEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 166

BLAST of CaUC06G107410 vs. NCBI nr
Match: KAA0039884.1 (uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41
Identity = 107/166 (64.46%), Postives = 115/166 (69.28%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSPRP------NKRKEREGLDDE--------AHQLSLTAKVPRQPP 61
           NTTKTMRLPPRRLMTSPRP      NKRKEREGLDD+        AHQLS TAKV   P 
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV---PT 64

Query: 62  PSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPS---------------E 121
           P H+ QLLAGYLAHEFLTKGTLFGQ WD + PDP  A+++  PS               E
Sbjct: 65  PPHSKQLLAGYLAHEFLTKGTLFGQTWDNN-PDPAAANAIAMPSSSCYYYYSLTTTEAQE 124

Query: 122 KRQAEL---HPKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           KRQA+    H K+YQSYVEVANLLKHSG H QGIVNPTQLA LLNL
Sbjct: 125 KRQAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 166

BLAST of CaUC06G107410 vs. NCBI nr
Match: XP_008459949.1 (PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 3.3e-41
Identity = 107/167 (64.07%), Postives = 115/167 (68.86%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSPRP------NKRKEREGLDDE--------AHQLSLTAKVPRQPP 61
           NTTKTMRLPPRRLMTSPRP      NKRKEREGLDD+        AHQLS TAKV   P 
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV---PT 64

Query: 62  PSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPS---------------- 121
           P H+ QLLAGYLAHEFLTKGTLFGQ WD + PDP  A+++  PS                
Sbjct: 65  PPHSKQLLAGYLAHEFLTKGTLFGQTWDNN-PDPAAANAIAMPSSSSCYYYYSLTTTEAQ 124

Query: 122 EKRQAEL---HPKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           EKRQA+    H K+YQSYVEVANLLKHSG H QGIVNPTQLA LLNL
Sbjct: 125 EKRQAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 167

BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A0A0KDC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.2e-43
Identity = 111/164 (67.68%), Postives = 116/164 (70.73%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSPRP-NKRKEREGL-----DDEAHQLSLTAKVPRQPPPSHANQLL 61
           NTTKTMRLPPRRLMTSPRP NKRKEREGL     DDEAHQL LTAKVP+  P  H+ QLL
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNKRKEREGLDYDDDDDEAHQLPLTAKVPKPTPTPHSKQLL 64

Query: 62  AGYLAHEFLTKGTLFGQAWDPDLPDP-------TMASS-------------LPEPSEKRQ 121
           AGYLAHEFLTKGTLFGQ WD   PDP        MASS               EP EKRQ
Sbjct: 65  AGYLAHEFLTKGTLFGQTWDN--PDPAANANANAMASSSSSFSSFSSSPPLTTEPQEKRQ 124

Query: 122 AEL---HP-KSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           AE    HP K+YQSYVEVANLLKH+GPH +GIVNPTQLA  LNL
Sbjct: 125 AEAQLHHPKKNYQSYVEVANLLKHNGPHLEGIVNPTQLARFLNL 166

BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A5A7T8V2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001610 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41
Identity = 107/166 (64.46%), Postives = 115/166 (69.28%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSPRP------NKRKEREGLDDE--------AHQLSLTAKVPRQPP 61
           NTTKTMRLPPRRLMTSPRP      NKRKEREGLDD+        AHQLS TAKV   P 
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV---PT 64

Query: 62  PSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPS---------------E 121
           P H+ QLLAGYLAHEFLTKGTLFGQ WD + PDP  A+++  PS               E
Sbjct: 65  PPHSKQLLAGYLAHEFLTKGTLFGQTWDNN-PDPAAANAIAMPSSSCYYYYSLTTTEAQE 124

Query: 122 KRQAEL---HPKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           KRQA+    H K+YQSYVEVANLLKHSG H QGIVNPTQLA LLNL
Sbjct: 125 KRQAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 166

BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A1S3CBD7 (uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 107/167 (64.07%), Postives = 115/167 (68.86%), Query Frame = 0

Query: 2   NTTKTMRLPPRRLMTSPRP------NKRKEREGLDDE--------AHQLSLTAKVPRQPP 61
           NTTKTMRLPPRRLMTSPRP      NKRKEREGLDD+        AHQLS TAKV   P 
Sbjct: 5   NTTKTMRLPPRRLMTSPRPNNNNNNNKRKEREGLDDDDHHDDDEAAHQLSFTAKV---PT 64

Query: 62  PSHANQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPS---------------- 121
           P H+ QLLAGYLAHEFLTKGTLFGQ WD + PDP  A+++  PS                
Sbjct: 65  PPHSKQLLAGYLAHEFLTKGTLFGQTWDNN-PDPAAANAIAMPSSSSCYYYYSLTTTEAQ 124

Query: 122 EKRQAEL---HPKSYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           EKRQA+    H K+YQSYVEVANLLKHSG H QGIVNPTQLA LLNL
Sbjct: 125 EKRQAQAELHHHKNYQSYVEVANLLKHSGSHLQGIVNPTQLARLLNL 167

BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A2P5XWB4 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G232800v1 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26
Identity = 77/144 (53.47%), Postives = 89/144 (61.81%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSPRPNKRKEREGLD-DEAHQLSLTAK--VPRQPPPSHANQLLAGYLA 63
           TKTMRLPPRR+  S   NKRKER+G D      L  ++K  +P  PPP  +N LLAGYLA
Sbjct: 3   TKTMRLPPRRVPDSMPNNKRKERDGFDLKPLTSLPPSSKPPMPAAPPPLLSNHLLAGYLA 62

Query: 64  HEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQ---------AELHPKSYQSYVEVAN 123
           HEFLT GTLFGQ WDP  P  + A S     EK +         AEL  K +Q YVEVA+
Sbjct: 63  HEFLTNGTLFGQPWDPTRPQQSPAESRKGTREKAEPNDRSAPGDAELKLKKHQMYVEVAS 122

Query: 124 LLKHSGPHFQGIVNPTQLAHLLNL 136
           LLK  G H QGIVNPTQL+  L +
Sbjct: 123 LLKTDGAHLQGIVNPTQLSRFLEM 146

BLAST of CaUC06G107410 vs. ExPASy TrEMBL
Match: A0A5D2PWX7 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G249800v1 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.3e-26
Identity = 77/144 (53.47%), Postives = 89/144 (61.81%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSPRPNKRKEREGLD-DEAHQLSLTAK--VPRQPPPSHANQLLAGYLA 63
           TKTMRLPPRR+  S   NKRKER+G D      L  ++K  +P  PPP  +N LLAGYLA
Sbjct: 3   TKTMRLPPRRVPDSMPNNKRKERDGFDLKPLTSLPPSSKPPMPAAPPPLLSNHLLAGYLA 62

Query: 64  HEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQ---------AELHPKSYQSYVEVAN 123
           HEFLT GTLFGQ WDP  P  + A S     EK +         AEL  K +Q YVEVA+
Sbjct: 63  HEFLTNGTLFGQPWDPTRPQQSPAESRKGTREKAEPNDRSAPGDAELKLKKHQMYVEVAS 122

Query: 124 LLKHSGPHFQGIVNPTQLAHLLNL 136
           LLK  G H QGIVNPTQL+  L +
Sbjct: 123 LLKTDGAHLQGIVNPTQLSRFLEM 146

BLAST of CaUC06G107410 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 3.8e-19
Identity = 60/148 (40.54%), Postives = 78/148 (52.70%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSPRPNKRKEREGLDDEAHQL-SLTAKVPRQPPPSH-----------A 63
           TKTMRLPPRR+ +     K+ E   ++       S+  K P  P P+            +
Sbjct: 3   TKTMRLPPRRVTSGAVAGKQTESAVINPPPPPTKSIVKKTPIIPRPTTTATVALAEPVCS 62

Query: 64  NQLLAGYLAHEFLTKGTLFGQAWDPDLPD--PTMASSLPEPSEKRQAELHPKSY--QSYV 123
           NQLLAGYLAHEFL  GTLFG+ W+P      P    S+     K   ++ P  +  + YV
Sbjct: 63  NQLLAGYLAHEFLNNGTLFGELWNPTKAQAGPLTTQSIDPRKNKPSHDIEPSDHKRRRYV 122

Query: 124 EVANLLKHSGPHFQGIVNPTQLAHLLNL 136
           EVAN+L+  G H  GIVNP+QLA  L L
Sbjct: 123 EVANILRVDGTHLPGIVNPSQLARFLKL 150

BLAST of CaUC06G107410 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 9.4e-18
Identity = 62/154 (40.26%), Postives = 79/154 (51.30%), Query Frame = 0

Query: 4   TKTMRLPPRRLMTSPRPNKRKEREG-LDDEAHQLSLTAKVPRQPP--------------- 63
           TKTMRLPPRR++T+   +KRKER+  +          AK P  PP               
Sbjct: 3   TKTMRLPPRRVLTA---DKRKERDAFISSVTDNPPEIAKFPSPPPKLVPPPVNPISKKSS 62

Query: 64  -----PSHANQL-LAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQAELHPK 123
                P  +NQL LAGYL+HE+LT+GTLFG+ W+        +   P  + +   E  PK
Sbjct: 63  TAAAEPIGSNQLMLAGYLSHEYLTQGTLFGEQWNQARAQAESSKIKPSHTVEPAEECEPK 122

Query: 124 SYQSYVEVANLLKHSGPHFQGIVNPTQLAHLLNL 136
             + Y EVANLL+  G    GIVNP QLA  L L
Sbjct: 123 R-KRYREVANLLRSDGAQLPGIVNPAQLARFLKL 152

BLAST of CaUC06G107410 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 )

HSP 1 Score: 62.0 bits (149), Expect = 4.2e-10
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0

Query: 52  NQLLAGYLAHEFLTKGTLFGQAWDPDLPDPTMASSLPEPSEKRQAELHPKSYQSYVEVAN 111
           N LLAGY+AHE+LT GT+ G+       +     S P P + R+ +   K+ QSY EVA+
Sbjct: 29  NWLLAGYMAHEYLTCGTMLGRKLYSGWAEVGPLVS-PSPLQSREVK---KARQSYSEVAS 88

Query: 112 LLKHSGPHFQGIVNPTQLAHLLNL 136
           + K  G H  G+VNPTQLA  + +
Sbjct: 89  VFKTDGNHVPGVVNPTQLAKWIQM 108

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038906548.12.5e-5281.63uncharacterized protein LOC120092519 [Benincasa hispida][more]
KAG7014604.12.5e-4475.94hypothetical protein SDJN02_24783, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_011656778.14.6e-4367.68uncharacterized protein LOC105435768 [Cucumis sativus] >KGN46382.1 hypothetical ... [more]
KAA0039884.12.5e-4164.46uncharacterized protein E6C27_scaffold122G001610 [Cucumis melo var. makuwa][more]
XP_008459949.13.3e-4164.07PREDICTED: uncharacterized protein LOC103498915 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDC02.2e-4367.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088100 PE=4 SV=1[more]
A0A5A7T8V21.2e-4164.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CBD71.6e-4164.07uncharacterized protein LOC103498915 OS=Cucumis melo OX=3656 GN=LOC103498915 PE=... [more]
A0A2P5XWB44.3e-2653.47Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A07G232800v1 PE... [more]
A0A5D2PWX74.3e-2653.47Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A07G249800v1 P... [more]
Match NameE-valueIdentityDescription
AT5G44060.13.8e-1940.54unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G04000.19.4e-1840.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G23440.14.2e-1042.86embryo sac development arrest 6 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL246-FR2) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availablePANTHERPTHR34657EMBRYO SAC DEVELOPMENT ARREST 6coord: 3..135
NoneNo IPR availablePANTHERPTHR34657:SF10F21M11.6 PROTEINcoord: 3..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CaUC06G107410.1CaUC06G107410.1mRNA